Os12g0175900

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0175900| Description = RNase P subunit p30 family protein| Version = NM_001072825.1 GI:115487611 GeneID:4351650| Length = 1188 bp| Definit...")
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Gene Name

Os12g0175900

Description

RNase P subunit p30 family protein

Version

NM_001072825.1 GI:115487611 GeneID:4351650

Length

1188 bp

Definition

Oryza sativa Japonica Group Os12g0175900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3860652..3861839

Sequence Coding Region

3860652..3860886,3860998..3861155,3861300..3861839

Expression

GEO Profiles:Os12g0175900

Genome Context

<gbrowseImage1> name=NC_008405:3860652..3861839 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3860652..3861839 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctgccggcttcttcgacctcagcatcctccccgacgactccaaatctaccaccaccaacactagcgtagtcgcccgtgcccttgacctcggctactccgcggtcgcgcttgatcaccctcaccgtggcctactcactgactcccatgcacctattgcctcctctctccgggtgtcaccctccgcctccctccaccgccgtcgacatcccttcctacaatacacgcgcatcaccctctccctcgactccgctgccgcctgcgcctccgccctggccccctctgccgctcgcctccttcgcacctatgacatcgtcgccgcgcggccgctcacccaagccgccttcgaccacctctgtcaggccacatttgaccacctcaatattgtctccatcgacttttcccacaagctgtccttccgcctcaagctccccatgctcaagcttgcactgcagaagggcctgcacttggagatcgcctattctcccctcatcgctgatgccgcttcaaggagacaggccatagccgaagccaagctcttggtggagtggactaaaggaaagaatctcatcatatcaagtgctgctcacactgcttctgaaattagaggaccctatgatgccataaacttatcttcttatttgcttggcctttctacccaacgagccaaagctgctctatccgtcaactgcaggtcactggtttccaaggctctgaggaaaaagcacttctacaaggaaaccattagaatcgacaggctgttaccaaataggcagttgaattcagcagacttcaagcttgctgactggattagttgggatcctatgcctcatgaagtagatctgctatctttggaattgccagcttacaaaggagaaccacaatctcttgatataaatccagaaccttctgccaatgaagatgattga</cdnaseq>

Protein Sequence

<aaseq>MAPAGFFDLSILPDDSKSTTTNTSVVARALDLGYSAVALDHPHR GLLTDSHAPIASSLRVSPSASLHRRRHPFLQYTRITLSLDSAAACASALAPSAARLLR TYDIVAARPLTQAAFDHLCQATFDHLNIVSIDFSHKLSFRLKLPMLKLALQKGLHLEI AYSPLIADAASRRQAIAEAKLLVEWTKGKNLIISSAAHTASEIRGPYDAINLSSYLLG LSTQRAKAALSVNCRSLVSKALRKKHFYKETIRIDRLLPNRQLNSADFKLADWISWDP MPHEVDLLSLELPAYKGEPQSLDINPEPSANEDD</aaseq>

Gene Sequence

<dnaseqindica>954..1188#685..842#1..540#atggcgcctgccggcttcttcgacctcagcatcctccccgacgactccaaatctaccaccaccaacactagcgtagtcgcccgtgcccttgacctcggctactccgcggtcgcgcttgatcaccctcaccgtggcctactcactgactcccatgcacctattgcctcctctctccgggtgtcaccctccgcctccctccaccgccgtcgacatcccttcctacaatacacgcgcatcaccctctccctcgactccgctgccgcctgcgcctccgccctggccccctctgccgctcgcctccttcgcacctatgacatcgtcgccgcgcggccgctcacccaagccgccttcgaccacctctgtcaggccacatttgaccacctcaatattgtctccatcgacttttcccacaagctgtccttccgcctcaagctccccatgctcaagcttgcactgcagaagggcctgcacttggagatcgcctattctcccctcatcgctgatgccgcttcaaggagacaggccatagccgaagccaaggttggccatctcttgctcttccttattgcctttgcatatcgtaatactaatactcagttccttagtaaccaaaaccttttcatcttttttcagctcttgtattactcagttccttagtaaccaaaacctttcaccttttttcagctcttggtggagtggactaaaggaaagaatctcatcatatcaagtgctgctcacactgcttctgaaattagaggaccctatgatgccataaacttatcttcttatttgcttggcctttctacccaacgagccaaagctgctctatccgtcaactgcaggtcacttgcacgtctcttatatgatatccgtagcttattttagaaagctaggcagtttagcatgaatcatgatgccgtgccatgtattctaagccatatgttcattctcaggtcactggtttccaaggctctgaggaaaaagcacttctacaaggaaaccattagaatcgacaggctgttaccaaataggcagttgaattcagcagacttcaagcttgctgactggattagttgggatcctatgcctcatgaagtagatctgctatctttggaattgccagcttacaaaggagaaccacaatctcttgatataaatccagaaccttctgccaatgaagatgattga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0175900, RefSeq:Os12g0175900