BGIOSGA036459

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Revision as of 08:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036459| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036459, complete gene.| tag = OsI_378...")
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Gene Name

BGIOSGA036459

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036459, complete gene.

LocusTag

OsI_37806

Ensembl Transcript ID

BGIOSGA036459-TA

Ensembl Protein ID

BGIOSGA036459-PA

Length

4409

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5652896..5657304

Sequence Coding Region

5654199..5657304,5652896..5654019

Genome Context

<gbrowseImage1> name=IndicaChromosome12:5652896..5657304 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:5652896..5657304 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTACTTCTGCTGCAGTGGTGTTTGCTGGGAAATCGGTGGCAGCTCCTGTCATCAAGGAGATTATCACCAGGGCCTTAAACTACCTTGATGGCTACCTCAGCGCTAAAAGCATGGAGGAGATGAAGAACAAGCTAGAGGAAGGGATGCTGCAGATCCAAGCAGTTCTTGATGTTGTCAATCCAGATCGATTCAAGGAACACAGCGTAGCGCTGGATCAGTGGTTCTGGAAGCTCAGGGATGCAGTCGAGGAAGCCGAGGACGCCATCGATGAGCTCGAGTACTATGAGCTTGAGGAGGAAGCCAAGGATTACAAGGTTAGTGACTGGGGTTCACCTCTTGCTAAGTGGAAGCATAAAGTTGTTAAATCCATTAAGGATGTCCGTGTTTTGGATAAGTCTGTGAATCAATTTACTCATCGTGGTACACTCAAGAGGCTAAAGAAAGCTATGGATGGTTTAGACAAGGCTGCTGCAGGTACCACAAAATTTCTTGAAGTTGTGAGATGCATCAATGGAGCCACCTCTAGCAGTCAAAAGCTGGGACATTTGGCTAGCAGCAATGATCGTCAGACAGGTTCCATGTTAACGGTAGATAAGTTTGTTGGCCGAGAATCAGAGAAGAAAAGGATTCTTGAGTGGTTGACCAAGGACACATCAGTTAAAGAGTCTGAAATTGTGCCTAGTGCTAATCATGTTCCTATCTTCTCAGTAATTGGTCATGGTGGTATGGGGAAGACTACTTTGGCTCAGAGCATATGCCAACAAGATGAGGTTGTAAAGCATTTCAAGGTCATTTGGATTACTGTATCAACTAGTTTTGATGCAACCTCAGTGACAAGGAAAATTTTGGAATCTGCTACAAAGGGAGAACCTAGCAATAAACATTTGGAAGCACTACAGCAAGAACTTAAAGAGAAACTAAACTCTGTTAAGTTCCTTCTTGTCATGGATGACGTTTGGGAAGAAGGGAAAAGAGATGAATGGGAAAAGTTGTTTGCTCCTCTGCGGTCCGGAAAGAATGGGAGCAGAATTCTGTTGACAACCCGTATGGCATCCGTGGCAGACATGGCTGCAAAAGCAATGGGAGTTGCAAGAGATTGCTTGATATTAGGAGAACTGGAAGAAGACGAAAATATTGAACTCTTCAATCATCATGTATTTTCTAGTTTGAATTTGCAGGACTATAGCCACTTCAAAAAGACTGGAGAACAAATTGCAAGGAAACTGGGAGGATGTCCCTTGGTAATTAAGGTCACCTGTGGACATTTGCAAGGTAACATGAGCGTTGCATACTGGGAAAATTTCTTGCACATACACTTGGAACATTTTAAAGGGTCTGACATTGACATTATGAAGGTTCTCAAATTAAGCTACCAACATCTTCCAACTGAGTTACAGATTTGCTTTAGGTTTTGTAGCTTATTTCCTGAGGACCACAAATTTCGCAAGGAAGATCTTGTGCATATGTGGATGTGTTCAGGATTGATCCCGCAGGCCACAAATGAGACACTAAATTTCGAGGATATTGGAGAACGAATATTGGCTGACCTAACTAGAAAGTCATTCTTTGATCTAAAGTCCAGAGCATATAGATATGGTCTAGACCAAGAAAAATACTATGATCTAAAGTCCAGAGTATATAGATATGGTCTAGACCAAGAAGAATACTATGTCATGCATGACTTAATGCATGAATTAGCAAGAAATGTATCCTATGGTGAATGCGCAAGAATAACTAGTCCTGTCAAGTTTAAAGATATACGGGACACAGTCAGACACATATCCATTTTATGCATTCCTCAATTTTCTATCGATGTGGTCAAGAAAATATCCCAATTTAAGAATCTTCGCAGTATCATCATTGTTACTGAATCTAAGCTTGATAAGGATACAAAGAATACACTTCAAAAAATCATTGAAAGCACAAAATCATTACGGCTATTTCATTCAAGGTTGAGAATAAGATTTGATTTTTCCAGCAAGTTTGGAAAGTTGAAACACCTTCGCTACATCGACATATTTGGCATCTCATCAAAAGGGATTTATCATATTGCCAAACTTTATCACTTGTTGGTACTACTTTCGATTTCTAGCCCGACGACGGTATTTCCTTGTCGTAGGAGCTTGCTGTGTGTAGCAAAACAAGAGAGATTTATGTTGAACCTTTATCGTTTGCGGCATGTAGCCTATGGGCACTATACGTACGAATTGTTTGGTATGCTGCCTATAAGCAGACTTGAATCAATTCGGAGATTGAGTATATACCATGTGAAAGAAAGTGGGGGCAACAAAGTGAGCTCAATCAAGAACTTACATTGTCTTCGTGAGCTAAATATTCAAGGTGTTGAGAATATTGAGAACCACGAAGAGGCCATCAATGCTAAACTGAATGAAAAACAGCATCTCCATTCTCTGTCTCTTGAGTGGTCACCACATACTGGTGAACATGACACTGTAGACGAGTTGGTTCTTCAACACCTTGAGCCACACACTAATATCAGGAATCTAAGAATTTATGGCTATGAAGGGTGCGTCGTTCCATTTTGGATTGAGAACCTTTCTGTCAGAAAACTGGTATCAATCAAATTAGAAAGTTGTATAAACTGGGAACAACTACCGTCACTTGGAGAGCTAACACTGCTCAGATATCTTTTGTTGAGAAATCTTCCAAAGCTACAGCAGATTGGCCGGCATTCTCATATGTCTAGTAGTAGTTCCATGGAGCTGTTGCTACCTCCAAATCTTCTTAGTCTGGAAATAGAACAATGCCCAGAGCTGCAGGAATTACCTCTTCTACCTCCTAGTCTGGTATCATTTCAAATAATAGAAGTTAATTGGACTAAACTTCCAAGGATGGGCAAGCTATGCAGCAAGAGCAATGAAACAATTTTAGCCCAATTGCAGGAGGTTGTTATCAATGATTGTCCATGCTTAAGTTCCCTGGAAGACAGCTTTCTTGAGCAGAAGCAGCACATGGTAGCTCTAAGAAACCTGCACATCTACAACTGTATACATCTGGAGTCTGCATCGATACCATTTGAAGCAATGATCATGCTCAGATATCTATATATCAGACGCTGTCCGAAATTGAGGGCACTGAGAGCCCAATTGCAGGAGGTTGCTATCAGCAGTTGCCCATGCTTATGTTCCCTGGATGACAGCTTTCTTGAGCAGAAGCAGCACATGGTAGCTCTAAGAAACCTGCACATCCACAACTGTATACATCTGGAGTCTGCATCAATATCATTTGAAGCAATGAATATGCTCAAATCTCTAAGAATAGGAGGCTGTCCCGAATTGAGGGCACCGAGAGGTGCTGGGGAAATGTTCCTGCCACCATCACTTAATGATCTATATATCAGATCATGTGGTGACTATGAGCGTATAGTGGTTGTGTCACTGCAAGAGCAACAACTCATCAATCTCTCCGTATTGAATCTGAATAACTGCTCGAACCTGGTAACCCTCCCCTCTGCAGAAGCTTTCAGTAGGAATCTCACCTCGCTGCAGATCATCATCATACAGAAATGTGGGAATCTGTCATCCTTGGGTGGGCTTGAATCCCTTCCATCCCTCTCTGAATTAACAATCAGACGTTGTGCTAAACTCACAAAATTTGGTTCATCCGTAAATCCATATGTATCTGGTGGTGAAGAAGAGCATCTGGTGGATTCAAGAAGTTCCCTGCGTATCAGCTCTCTTACAATTGATCTTCCATCCCTGCTGCTTGTTGAGCCTCTCAAGAGTCTCTGCCACACTGAACACTTAGAAATTGAAGATGCGTCACAGATGAAGAGCTTACCTGATCGTTGGCTGCTGCAGAACAGTGCATCTCTCAAATCCCTACACATACGCAAAGTCAAGTCCTTAGAATCTCTCCAACCCAGCATGCGAGACCTAACCTCCCTCCAGAAATTGCCGCTATCTGGTGTTGGCCAACTCCTCGGTTCACTTCCAGATTTTCCCACCTCTCTGTTGGAGCTGGATATTTCGGAATGTGGTTCAGAGTTGAAGAAGAAATTTAGAAAACATGGAAGCCCTGAAAGAAGCATGATTGCCCACATCCTCAGAGTGAGAATAGGTATCTCCACCCTCCACACTCACATTCTTGCTTGCTTTGAAGCGTGCTTGCTTGATGTCATAGTCAATTTACTGCTCTTACTTTGTTACCCTTTTCACCTACTGCCGTCTTCTTGTCCTGTTAAGAGTATGATGCGATGTCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MATSAAVVFAGKSVAAPVIKEIITRALNYLDGYLSAKSMEEMKNKLEEGMLQIQAVLDVVNPDRFKEHSVALDQWFWKLRDAVEEAEDAIDELEYYELEEEAKDYKVSDWGSPLAKWKHKVVKSIKDVRVLDKSVNQFTHRGTLKRLKKAMDGLDKAAAGTTKFLEVVRCINGATSSSQKLGHLASSNDRQTGSMLTVDKFVGRESEKKRILEWLTKDTSVKESEIVPSANHVPIFSVIGHGGMGKTTLAQSICQQDEVVKHFKVIWITVSTSFDATSVTRKILESATKGEPSNKHLEALQQELKEKLNSVKFLLVMDDVWEEGKRDEWEKLFAPLRSGKNGSRILLTTRMASVADMAAKAMGVARDCLILGELEEDENIELFNHHVFSSLNLQDYSHFKKTGEQIARKLGGCPLVIKVTCGHLQGNMSVAYWENFLHIHLEHFKGSDIDIMKVLKLSYQHLPTELQICFRFCSLFPEDHKFRKEDLVHMWMCSGLIPQATNETLNFEDIGERILADLTRKSFFDLKSRAYRYGLDQEKYYDLKSRVYRYGLDQEEYYVMHDLMHELARNVSYGECARITSPVKFKDIRDTVRHISILCIPQFSIDVVKKISQFKNLRSIIIVTESKLDKDTKNTLQKIIESTKSLRLFHSRLRIRFDFSSKFGKLKHLRYIDIFGISSKGIYHIAKLYHLLVLLSISSPTTVFPCRRSLLCVAKQERFMLNLYRLRHVAYGHYTYELFGMLPISRLESIRRLSIYHVKESGGNKVSSIKNLHCLRELNIQGVENIENHEEAINAKLNEKQHLHSLSLEWSPHTGEHDTVDELVLQHLEPHTNIRNLRIYGYEGCVVPFWIENLSVRKLVSIKLESCINWEQLPSLGELTLLRYLLLRNLPKLQQIGRHSHMSSSSSMELLLPPNLLSLEIEQCPELQELPLLPPSLVSFQIIEVNWTKLPRMGKLCSKSNETILAQLQEVVINDCPCLSSLEDSFLEQKQHMVALRNLHIYNCIHLESASIPFEAMIMLRYLYIRRCPKLRALRAQLQEVAISSCPCLCSLDDSFLEQKQHMVALRNLHIHNCIHLESASISFEAMNMLKSLRIGGCPELRAPRGAGEMFLPPSLNDLYIRSCGDYERIVVVSLQEQQLINLSVLNLNNCSNLVTLPSAEAFSRNLTSLQIIIIQKCGNLSSLGGLESLPSLSELTIRRCAKLTKFGSSVNPYVSGGEEEHLVDSRSSLRISSLTIDLPSLLLVEPLKSLCHTEHLEIEDASQMKSLPDRWLLQNSASLKSLHIRKVKSLESLQPSMRDLTSLQKLPLSGVGQLLGSLPDFPTSLLELDISECGSELKKKFRKHGSPERSMIAHILRVRIGISTLHTHILACFEACLLDVIVNLLLLLCYPFHLLPSSCPVKSMMRCP</aaseq>

Gene Sequence

<dnaseqindica>1..3106#3286..4409#ATGGCTACTTCTGCTGCAGTGGTGTTTGCTGGGAAATCGGTGGCAGCTCCTGTCATCAAGGAGATTATCACCAGGGCCTTAAACTACCTTGATGGCTACCTCAGCGCTAAAAGCATGGAGGAGATGAAGAACAAGCTAGAGGAAGGGATGCTGCAGATCCAAGCAGTTCTTGATGTTGTCAATCCAGATCGATTCAAGGAACACAGCGTAGCGCTGGATCAGTGGTTCTGGAAGCTCAGGGATGCAGTCGAGGAAGCCGAGGACGCCATCGATGAGCTCGAGTACTATGAGCTTGAGGAGGAAGCCAAGGATTACAAGGTTAGTGACTGGGGTTCACCTCTTGCTAAGTGGAAGCATAAAGTTGTTAAATCCATTAAGGATGTCCGTGTTTTGGATAAGTCTGTGAATCAATTTACTCATCGTGGTACACTCAAGAGGCTAAAGAAAGCTATGGATGGTTTAGACAAGGCTGCTGCAGGTACCACAAAATTTCTTGAAGTTGTGAGATGCATCAATGGAGCCACCTCTAGCAGTCAAAAGCTGGGACATTTGGCTAGCAGCAATGATCGTCAGACAGGTTCCATGTTAACGGTAGATAAGTTTGTTGGCCGAGAATCAGAGAAGAAAAGGATTCTTGAGTGGTTGACCAAGGACACATCAGTTAAAGAGTCTGAAATTGTGCCTAGTGCTAATCATGTTCCTATCTTCTCAGTAATTGGTCATGGTGGTATGGGGAAGACTACTTTGGCTCAGAGCATATGCCAACAAGATGAGGTTGTAAAGCATTTCAAGGTCATTTGGATTACTGTATCAACTAGTTTTGATGCAACCTCAGTGACAAGGAAAATTTTGGAATCTGCTACAAAGGGAGAACCTAGCAATAAACATTTGGAAGCACTACAGCAAGAACTTAAAGAGAAACTAAACTCTGTTAAGTTCCTTCTTGTCATGGATGACGTTTGGGAAGAAGGGAAAAGAGATGAATGGGAAAAGTTGTTTGCTCCTCTGCGGTCCGGAAAGAATGGGAGCAGAATTCTGTTGACAACCCGTATGGCATCCGTGGCAGACATGGCTGCAAAAGCAATGGGAGTTGCAAGAGATTGCTTGATATTAGGAGAACTGGAAGAAGACGAAAATATTGAACTCTTCAATCATCATGTATTTTCTAGTTTGAATTTGCAGGACTATAGCCACTTCAAAAAGACTGGAGAACAAATTGCAAGGAAACTGGGAGGATGTCCCTTGGTAATTAAGGTCACCTGTGGACATTTGCAAGGTAACATGAGCGTTGCATACTGGGAAAATTTCTTGCACATACACTTGGAACATTTTAAAGGGTCTGACATTGACATTATGAAGGTTCTCAAATTAAGCTACCAACATCTTCCAACTGAGTTACAGATTTGCTTTAGGTTTTGTAGCTTATTTCCTGAGGACCACAAATTTCGCAAGGAAGATCTTGTGCATATGTGGATGTGTTCAGGATTGATCCCGCAGGCCACAAATGAGACACTAAATTTCGAGGATATTGGAGAACGAATATTGGCTGACCTAACTAGAAAGTCATTCTTTGATCTAAAGTCCAGAGCATATAGATATGGTCTAGACCAAGAAAAATACTATGATCTAAAGTCCAGAGTATATAGATATGGTCTAGACCAAGAAGAATACTATGTCATGCATGACTTAATGCATGAATTAGCAAGAAATGTATCCTATGGTGAATGCGCAAGAATAACTAGTCCTGTCAAGTTTAAAGATATACGGGACACAGTCAGACACATATCCATTTTATGCATTCCTCAATTTTCTATCGATGTGGTCAAGAAAATATCCCAATTTAAGAATCTTCGCAGTATCATCATTGTTACTGAATCTAAGCTTGATAAGGATACAAAGAATACACTTCAAAAAATCATTGAAAGCACAAAATCATTACGGCTATTTCATTCAAGGTTGAGAATAAGATTTGATTTTTCCAGCAAGTTTGGAAAGTTGAAACACCTTCGCTACATCGACATATTTGGCATCTCATCAAAAGGGATTTATCATATTGCCAAACTTTATCACTTGTTGGTACTACTTTCGATTTCTAGCCCGACGACGGTATTTCCTTGTCGTAGGAGCTTGCTGTGTGTAGCAAAACAAGAGAGATTTATGTTGAACCTTTATCGTTTGCGGCATGTAGCCTATGGGCACTATACGTACGAATTGTTTGGTATGCTGCCTATAAGCAGACTTGAATCAATTCGGAGATTGAGTATATACCATGTGAAAGAAAGTGGGGGCAACAAAGTGAGCTCAATCAAGAACTTACATTGTCTTCGTGAGCTAAATATTCAAGGTGTTGAGAATATTGAGAACCACGAAGAGGCCATCAATGCTAAACTGAATGAAAAACAGCATCTCCATTCTCTGTCTCTTGAGTGGTCACCACATACTGGTGAACATGACACTGTAGACGAGTTGGTTCTTCAACACCTTGAGCCACACACTAATATCAGGAATCTAAGAATTTATGGCTATGAAGGGTGCGTCGTTCCATTTTGGATTGAGAACCTTTCTGTCAGAAAACTGGTATCAATCAAATTAGAAAGTTGTATAAACTGGGAACAACTACCGTCACTTGGAGAGCTAACACTGCTCAGATATCTTTTGTTGAGAAATCTTCCAAAGCTACAGCAGATTGGCCGGCATTCTCATATGTCTAGTAGTAGTTCCATGGAGCTGTTGCTACCTCCAAATCTTCTTAGTCTGGAAATAGAACAATGCCCAGAGCTGCAGGAATTACCTCTTCTACCTCCTAGTCTGGTATCATTTCAAATAATAGAAGTTAATTGGACTAAACTTCCAAGGATGGGCAAGCTATGCAGCAAGAGCAATGAAACAATTTTAGCCCAATTGCAGGAGGTTGTTATCAATGATTGTCCATGCTTAAGTTCCCTGGAAGACAGCTTTCTTGAGCAGAAGCAGCACATGGTAGCTCTAAGAAACCTGCACATCTACAACTGTATACATCTGGAGTCTGCATCGATACCATTTGAAGCAATGATCATGCTCAGATATCTATATATCAGACGCTGTCCGAAATTGAGGGCACTGAGAGGTACTGGAGAAAAGTTCCTGCCATCATCGCTTCTATATCTGCAAATAAAACAATGCCCCAAACTGCAGGAATTACCTCTTCTACCTCCTAGTCTGATGTCATTTAAAATAAAAATGTTAATTGGACTAAACTTCCAAGGATGGGCAAGCTATGCAGCGAGAGCAATGAAACAATTTTAGCCCAATTGCAGGAGGTTGCTATCAGCAGTTGCCCATGCTTATGTTCCCTGGATGACAGCTTTCTTGAGCAGAAGCAGCACATGGTAGCTCTAAGAAACCTGCACATCCACAACTGTATACATCTGGAGTCTGCATCAATATCATTTGAAGCAATGAATATGCTCAAATCTCTAAGAATAGGAGGCTGTCCCGAATTGAGGGCACCGAGAGGTGCTGGGGAAATGTTCCTGCCACCATCACTTAATGATCTATATATCAGATCATGTGGTGACTATGAGCGTATAGTGGTTGTGTCACTGCAAGAGCAACAACTCATCAATCTCTCCGTATTGAATCTGAATAACTGCTCGAACCTGGTAACCCTCCCCTCTGCAGAAGCTTTCAGTAGGAATCTCACCTCGCTGCAGATCATCATCATACAGAAATGTGGGAATCTGTCATCCTTGGGTGGGCTTGAATCCCTTCCATCCCTCTCTGAATTAACAATCAGACGTTGTGCTAAACTCACAAAATTTGGTTCATCCGTAAATCCATATGTATCTGGTGGTGAAGAAGAGCATCTGGTGGATTCAAGAAGTTCCCTGCGTATCAGCTCTCTTACAATTGATCTTCCATCCCTGCTGCTTGTTGAGCCTCTCAAGAGTCTCTGCCACACTGAACACTTAGAAATTGAAGATGCGTCACAGATGAAGAGCTTACCTGATCGTTGGCTGCTGCAGAACAGTGCATCTCTCAAATCCCTACACATACGCAAAGTCAAGTCCTTAGAATCTCTCCAACCCAGCATGCGAGACCTAACCTCCCTCCAGAAATTGCCGCTATCTGGTGTTGGCCAACTCCTCGGTTCACTTCCAGATTTTCCCACCTCTCTGTTGGAGCTGGATATTTCGGAATGTGGTTCAGAGTTGAAGAAGAAATTTAGAAAACATGGAAGCCCTGAAAGAAGCATGATTGCCCACATCCTCAGAGTGAGAATAGGTATCTCCACCCTCCACACTCACATTCTTGCTTGCTTTGAAGCGTGCTTGCTTGATGTCATAGTCAATTTACTGCTCTTACTTTGTTACCCTTTTCACCTACTGCCGTCTTCTTGTCCTGTTAAGAGTATGATGCGATGTCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036459