BGIOSGA036462

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Revision as of 08:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036462| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036462, complete gene.| tag = OsI_377...")
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Gene Name

BGIOSGA036462

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036462, complete gene.

LocusTag

OsI_37798

Ensembl Transcript ID

BGIOSGA036462-TA

Ensembl Protein ID

BGIOSGA036462-PA

Length

6236

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5571951..5578186

Sequence Coding Region

5577986..5578186,5576912..5577010),complement(5576733..5576810,5576409..5576629),complement(5575656..5575728
,5575268..5575552),complement(5574649..5574792,5573930..5573980),complement(5573550..5573599
,5571951..5572203

Genome Context

<gbrowseImage1> name=IndicaChromosome12:5571951..5578186 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:5571951..5578186 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCCGTCGCCCACCCGCCTCCTCCACCTCCCCCTCCTCGCCCCGAAGCCCTCTCCGCCGCGGTGTCTCGTCAGCCGCCGGAGTCGGCCCCGGCCTGCCGGCGACGCCGCCCGCTGCGGCTGCGCCACGGAGGCAGGTGGCGGCGGTGGCGGTGGAGGCTCCGTCGTCGTCGAGGATGATCTCTATGAGCTCCTGCAGTTGAGTGACAGAGGGGCACCAATATATCCTTTACAGGTTCTACCAAGAGATTTGCGAGATAATCTGCAGAATGAACCTAGAAAGGATCAGCTTTTAGAGGTTATTCTGGATTTGGGGAGACGACCTGAGGCACGTTTCCTTGGTGACTCTGGTGGCCAATATCTACGGGACAGTGAGATCTCACAGCAAGAATTGGAGGAGGCGCAGAGAGCTGTAGGAGAATTTGGAGGTGACAATCGTGCAGGAATCGAAGGTACATTACATAGAATATCTGCCATAAGGAGCAGAAAAGGAATGGTTGTTGGTTTAACCTGTCGAGTTGGCCGTGCCGTTACTGGGCATGTTGATATGGTCCGTGATCTCTTAAATTACAAAGAAAGCATTTTGTTTCTTGGAAGGCCTGGGGTTGGCAAGACTACTGTTATGCGTGAGATTGCACGTGTTCTAGCAGATGAATTTCAGAAAAGAGTGGTAATTGTGGATACAAGTAATGAGATTGGTGGGGATGGAGATATTCCTCATGCTGCGATTGGTGGTGCAAGAAGAATGCAAGTAGCTCAACCATCAATGCAGCATAGAGTGATGATTGAAGCAGTCGAAAACCATATGCCTGAGGTGGTTATTGTAGATGAGATAGGTACTGAAGCAGAGGCGCAAGCTTGTCGATCAATTGCAGAAAGGGGTGTGATGCTTATTGGTACAGCTCACGGAGAACATCTCGCAAACATTATAAAGAATCCAACTTTATCTGATTTGATTGGAGGAGTAGAAACTGTCACTCTTGGTGATGAAGAGGCCCGTGCTCGCCGCAGTCAGAAAAGTATTCTGGAGAGGAAGGCCCCTCCAACATTCCCTTTCCTTATTGAGATGAGGGAGCGACACTACTGGGTAACTCATCGGACTGAAAGGAGTGTGGACATGTTACTTCATGGCAAGAAACCACTTGTTGAGGTCAGGAAAAGGGATAACAAGTTTCAGGTTGTCATTGAAAGATGGGCAACAGATGCTGAGTCATGGTTGGTTCATTGGTTGACATCAGGGAGTAACTGCCATTGCTACATTTCCCAGCAAGAGATAAAGAGGCTTTCCTGCATGGCCAAGTGTGCCCTTGCTTGTTACTACATGTTAGTGCCAACAGCATCTGTCCTTGCTGTGGCAGGGCTTCACATGCCTGTGGCATGCATATGCATGAGCATGATTGATCTCTTGCACAAAGAGACAGACAATGGCTTATTTCTTGTAGTCCACTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAPSPTRLLHLPLLAPKPSPPRCLVSRRSRPRPAGDAARCGCATEAGGGGGGGGSVVVEDDLYELLQLSDRGAPIYPLQVLPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQQELEEAQRAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLLHGKKPLVEVRKRDNKFQVVIERWATDAESWLVHWLTSGSNCHCYISQQEIKRLSCMAKCALACYYMLVPTASVLAVAGLHMPVACICMSMIDLLHKETDNGLFLVVHS</aaseq>

Gene Sequence

<dnaseqindica>1..201#1177..1275#1377..1454#1558..1778#2459..2531#2635..2919#3395..3538#4207..4257#4588..4637#5984..6236#ATGGCCCCGTCGCCCACCCGCCTCCTCCACCTCCCCCTCCTCGCCCCGAAGCCCTCTCCGCCGCGGTGTCTCGTCAGCCGCCGGAGTCGGCCCCGGCCTGCCGGCGACGCCGCCCGCTGCGGCTGCGCCACGGAGGCAGGTGGCGGCGGTGGCGGTGGAGGCTCCGTCGTCGTCGAGGATGATCTCTATGAGCTCCTGCAGGTGTCCACTTACCCTCTCTCGTTTCTTTATCTCACCTTCTCAATTCTTTTTTTAGCTGCTCATGCATTCCTTGCTTCAATTTTGGAGCTGTTGAATGTTCTTCAATCTTTATCACAATGAAGAAATCAAAGAACATTGCAATAACCAAGTATTATTATTTGACATGGGTTATATTATACTATTCCCTCCGTTTTATATTATAAATCGTTTTGATTTTTTTCTTAATCAAACCTTTTTTAAATTTGACAAAGTTTATAGAAAAATATAGCACGTCAAAATATATTAAATGTTATATCTAATAAAATTAATTTAGTTCTATAAATATTGTTATGTTTTTTCTATAAGTTTAGTCAAATTTTCAAGAGGTTTGAATTAAAAAAGTCAAAATGACTTATAATACGAAATGGAGGGAGTAGTAGATAGCCTCAGCTAGAGAGCTGTTACTGCAACCACCTTTGTTGTTGGTAACCTCTCGAATGCTGACCCCAGTTATGTTCATAACCTTTTGAATGGCGAACTCCAGCTTACTATGTCGAATGAAGATGGCTGTGAAAGCTCAATTATACATCACATCCAGTTAACAGGAATCTCTGCACATCTAATGTAAATGAGACTGATCTAATAATCAAGCTCTTGATGATTATGCAGTTGATCAATGTTACATAGGTGGGGAACTGAGGATAACGACTGTTCTGTTTAGTGATGGCAGAGATGGTGATAAACATGTTTAGTTTGCATCATCTGCTCTTAGTCCAGCACTAGCTATTAGTGTAAGAAGAGACGAACATCCTACCATAAATTCTTTTAAATAAATTGCTAGGATGGCCATGTTACTGCTCTGAGATGAATTTGTTTCAATAGAAACTAAAATCTTTATGCCCATCGTGTTTCTAAGTGCAAAGCCATTTCTCTCATCCATACTTGATTAGACTGTTGTGTACTAGTAATTTGGTATAAGTGGTTCTTGTATGCTAGTTGAGTGACAGAGGGGCACCAATATATCCTTTACAGGTTCTACCAAGAGATTTGCGAGATAATCTGCAGAATGAACCTAGAAAGGATCAGCTTTTAGAGGTAAGCTAGATGCTGCTGAGCTCTGTCGTATTTGAATATTCCAGTGAAATTAGGCTATTATGGATTTGCAAAAATACCCTAGCTGATGAATGGGTGATTAGGTTATTCTGGATTTGGGGAGACGACCTGAGGCACGTTTCCTTGGTGACTCTGGTGGCCAATATCTACGGGACAGTGAGGTATCAAGCTACAATAGTACAATTTTGTCCAGTTCACATAGTTATGTTTTGCTTCCTGTGTATTGACAACTAATTTATGTTCTCTGGATTGTTTGTACGATAGATCTCACAGCAAGAATTGGAGGAGGCGCAGAGAGCTGTAGGAGAATTTGGAGGTGACAATCGTGCAGGAATCGAAGGTACATTACATAGAATATCTGCCATAAGGAGCAGAAAAGGAATGGTTGTTGGTTTAACCTGTCGAGTTGGCCGTGCCGTTACTGGGCATGTTGATATGGTCCGTGATCTCTTAAATTACAAAGAAAGCATTTTGTTTCTTGGAAGGTATGTCGCCTTTCGGCTTCAACATTTTTATCATCCTTTTATTATTCCTTTTATTAAATATAAGGTACCCCCAAAATTGCTCAGTACTACTTGCAAACATTACTAGTATTACAAGAGTGACCATATTTTTTTTAATTCAGCAGCATCTAAAGTAGTCTTAATCTGTGCATAACTGTTCAGCAACACGAGTCTATGACCTTATGTTTTTACTTCCCTTTTCCAGGATATTCTATGAAGTGATATTGTGATGATATTTCAAATGATCAAGCTTTCTATATTTTGCAGAACTAATTAAAGAGGAATTAAAGGAAAAGGACCTAAAATTCTCCAGATAAATTCATATAATATAACCTTTCTGATAGTCCATGATGTTGAATCAAGATGTTGCAGTTAAGTAAAATGCAACCTCTATGGCTGGAAGAGATCTTCTTTAGACCTTCGATTGTAACTAGATCACTCCTTGGTTAGATTAAGAAATATACCAAGAACCGACATAGTTTGGGAGGATTTATCATCATACAAATCTGGAATTCCATGTATGCTGTAGTCTGATTGTTACAAAACACATTTTACATATGCTGTCCACTCATGTCCCTTCAGGGACTCAGGCAAGGTGTGGTGTAGTCATGTGCATTTTAATGCAATTTGAAATTTCATTGATTTGTGTTTTATTTGGCCAGGCCTGGGGTTGGCAAGACTACTGTTATGCGTGAGATTGCACGTGTTCTAGCAGATGAATTTCAGAAAAGAGTGGTAACTAATCGATGTTACAATCTTGCAGACTTTCTTACTCATGTTCACTTTCTTCATATTTAATTCCTTACATGTTCTATCGGTGTATTGATGTTTAGGGCAGGTAATTGTGGATACAAGTAATGAGATTGGTGGGGATGGAGATATTCCTCATGCTGCGATTGGTGGTGCAAGAAGAATGCAAGTAGCTCAACCATCAATGCAGCATAGAGTGATGATTGAAGCAGTCGAAAACCATATGCCTGAGGTGGTTATTGTAGATGAGATAGGTACTGAAGCAGAGGCGCAAGCTTGTCGATCAATTGCAGAAAGGGGTGTGATGCTTATTGGTACAGCTCACGGAGAACATCTCGCAAACATTATAAAGAATCCAACTTTATCTGATTTGGTATGCCATTATTCACTTAATTTGCATTAGATGCATACTGTGTCCTTCTGTTCAATATATAACTTTTACATTGCATCTTACTCAATGCAGAAATGTCAAATGCCTAAAATGAGCTTGACTGAGAGTAGTATTCTTTCATTTGCTGTCATCCTATAAGCAGGTTCATTTGCTGTATCTGTAGTTGCAAAAGCCTAGAATTGTTCTGCTATTATTGGTTGAAAATGGACTGTGAAGATGACAAGTGCCATTGTCTTATCATGTCATTCAAAGTCATTTTTTTGTCATTTGCTTATGGATAACAATATGTAGTTAACAGTATGTCTTCGAGCATCCTATCCAAATTTCTTACATCTTACATCCTTGCTTTTCGAGAGTTCAATTGCAGATTTGTTTAAATAAACAAAATTTCAGATAAAAAGAGCATAATTTATGGGCCATTCAGTCATATTGTAATTCTATTTTGTTGGAAAATCAGATTGGAGGAGTAGAAACTGTCACTCTTGGTGATGAAGAGGCCCGTGCTCGCCGCAGTCAGAAAAGTATTCTGGAGAGGAAGGCCCCTCCAACATTCCCTTTCCTTATTGAGATGAGGGAGCGACACTACTGGGTAACTCATCGGGTATGTCTATCAGGCTACAATCTACATATGTCAAATGGTCATGAATATGTAACTTTCAACTTCACCTTAATAAGGTGATTTAAGCTGATGCTGAACTAGAATGCTCTGAACTGAAAATGAAAACCAAGTAAAAAACATCAGATTTGCACGGAAACAATATATGTCTTAGTTAAGATCCATATATATGTGCTTGCAGGATTCTGTGTAAAGTGTAGGAATTGATGGGGGAACCAAATATGATCATCAATTCATCATATTTTGCAGTACTAATGCATTTCCTAATTCACAGTTTTACTTATATTGTTCTAACTTGTGAACTAGTAGTATTCTTATGTCCTGACTAGGCATGATCAGCAATGATTTTATATCACACAACTGAAATATATATAAACGTTATATTTTTTTTCTTGACCAAATGCTAGGTTAATGAGATAGTTATTTACTATAATGCTAGGTTAATGACTGGTTGCCTTTGCGATAATTACTCTTTCTTACATCATCCTTATTGAATTGAACTACTTGTTCACTACTTCTATTGCTGCTCTATTTTTCAACTATTTTTTTTTCAAAGCTGAAGATGCTTCCTAAAGGTTATCACCTCTAAATTAATTTTATAGTATTGTTCACTGGGCGATGAATACAATACATGGTGTCTGTTTTATGTGCAGACTGAAAGGAGTGTGGACATGTTACTTCATGGCAAGAAACCACTTGTTGAGGTAATATAAAGCTAGCAATTTCATGACGATAAATGCAAGATTTTTTGTGTGTGTATGTGTGTGTAGTTTTCTGTACCACTAGTTAATCGTCTGATTTACCTGTAAGTTTCGCTTGCAAGCATAATATTCTATTTGCCATTGTGCTAGCTGCGAACTAGAGCATTCCAATGTTGATTCTATGGGTAAAATTATCTAAGTTATTCTTTATTTCAGTGCAATGTTGTTCTTTAGCAAAGCAAAATCTTCATTTCTGTAGTGATTCTCTCCATGCAATAATTTCAGTCCGAACATAATGTATAAAGCATCAACTGACAACTTGTCACATTTCAGGTCAGGAAAAGGGATAACAAGTTTCAGGTTGTCATTGAAAGATGGGCAACGTATGATGGAGATGGACTCTGAAATTCTGAATATGAGCTTACCTGTTACAGTTGCTTTTATCAAACTGCATGTTCCCGTCCCTCAGGATCCCTGTGGACTAATGTATACTTATTCAGCGTGTTGTTGGTATTGATTCCAAAGACTTGTCAAGTTATAGTACTGCTACTCCGGCAAAGGAACTGGTGCTGTTCATTGAGGTTAGTGCACAATTTCCATGCTGTTGCTCTCAATCAATTGCATATAAGTTTTTCTTTTCTTTTCCAGTTCAAAATCGTTTTTCTCTGAATCATGATAGGGTTTATTTGTGTAGACTTGAAGTTATAAATGTATTTTCTGTTTTGGCACTGAAAATGATTGTGTATTGGTTATATTTCTCATATGGCAGAAAATGAAGTGAAACATCCTGCATAGGTGCCTCTGGTGAACATTTGGACTAACTATCCCGGAATTGTACCTTTTGTGTTTCAATGGCAGTTCATCAATTGATTCCTAGTTTCCAGAAATATGAGAGGAAAACAGCAGATAAATCTATCCCAATTAGCTAGAAGATTTTACTGTATGAGGTTTTGATTAGCTCAGGAAAACTGTTGTATGGATTCAAAATCTTTGTTGACAATTACATTTGAATACAAAAGGAAGAAGTCCAAAAGTAATGCTGTTTAATGTCCTGTTGTTAGTTTTGTACCTCAGCTTCTTAATCTTCAATTCCTATTGCAATGATAAAAAGGTTGAGATGAGTAAAATTTAGTAGTCCCATTCCCAGTTCCAGCTGGAGCTGAGTAGGTCAAAAAAGGATTGAAGAAAGGCATTATGATAAAAGTGAAAGTGAAGTAAATAACAGTAAAACTTGCATTGCAGCTGTTCTTAGCCAACTGAAATTGCTGTTCTCTGAATCCCACAGCACAATGAAGCATCCCCTGAAACATGCTAGATGTACCTAATTCTGACTCCTGGTGTTTATAACCATGTGGAATATGCTACAATCTCATTGGGTGCATGGTTTAGTTCAGCTGCAGGACCTGCAATTCTCTCTGTGGTCCTTGTGTACAGTTTCAGTGTTAAACCCTGAATTTTGTAGTTTGCACAGTGTCAATGCCAGTAGTAAGAATGCAGACACTTTGTTTGTAGTAACCCAGTTGTTTTTTTTCTGAGCTGTGAACTGATTGCTGCATCGCTGGTACATTAGTACTACATATTATCATGCAGCTCCTCCTATGGACCACAAGAATCAACATCAACACATCTCTCTGAACCCTGAACCATTCATGCTTGAGTTGCTGAGGCTATACCTCTGAAATTTTGTTCACTTGCAATTTAATTTGTTTTGTTGGTGTTTGCAATGCAGAGATGCTGAGTCATGGTTGGTTCATTGGTTGACATCAGGGAGTAACTGCCATTGCTACATTTCCCAGCAAGAGATAAAGAGGCTTTCCTGCATGGCCAAGTGTGCCCTTGCTTGTTACTACATGTTAGTGCCAACAGCATCTGTCCTTGCTGTGGCAGGGCTTCACATGCCTGTGGCATGCATATGCATGAGCATGATTGATCTCTTGCACAAAGAGACAGACAATGGCTTATTTCTTGTAGTCCACTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036462

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036462&oldid=52767"