BGIOSGA036482

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Revision as of 08:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036482| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036482, complete gene.| tag = OsI_377...")
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Gene Name

BGIOSGA036482

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036482, complete gene.

LocusTag

OsI_37763

Ensembl Transcript ID

BGIOSGA036482-TA

Ensembl Protein ID

BGIOSGA036482-PA

Length

4518

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5125482..5129999

Sequence Coding Region

5129985..5129999,5129468..5129671),complement(5129294..5129386,5129114..5129212),complement(5128647..5129045
,5128498..5128554),complement(5128348..5128404,5127943..5127999),complement(5127787..5127843
,5127537..5127677),complement(5127301..5127420,5126851..5126896),complement(5125482..5125660

Genome Context

<gbrowseImage1> name=IndicaChromosome12:5125482..5129999 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:5125482..5129999 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAAAAGAAAGAAGGTATTTTAACTTGGATGAATGCTTAAAGGATTATGTCATGAGATCAGCTCATAAGAAATGGAAAGATTTCAAAAATAGGCTGAAAGCTAAGTATTTTGACCCTAAGAAGACTAATAAAGAACTTTGGAAAAAACATGATTCAAGAATATCACTAAAAGTCTGGAAGTGGCTTGTTTGTTTTTGGAGAAGTGAGAAAGGCAAAGCCCGCAGCAATCGTGGAAAAGCAAATCGTGCAAAAATGGTTGCAGTACACACCATTGGAACTAGGAGCTTAGCAAATGTTCGTCATGATATGGAGAAAAGAAAAGGTCGAAAAGTTAGTCGAGCAGAAGTTTTCAAAGTTGCATACACCCGTAAAGATGGTAGACCACAACCAGCTCATGAAGTAACAATTGCTAAAATTGAGGAGAAACTCACCGAGGAGCCAGAATTTGTGGACAAACCCATAGAAGAAGGAGACTATCTTTCAAACTTGCTTGGTAAGGAAAACAGAGGTAGAGTGATTGGAATAGGTATGGGTCCCACTCTTGCAAGTCTTGGTTTGCCAGGAACTAAATCAACAGCAAGAACAAGCTTACAGTTGGAGAGAGAAGCAAGACATAGAGCAGAAGAAGAAGTCCGTGCTTTAAAAGAAGGGAAGCAACAACTGGAAGAAAGAATGAAAGAACAAATGGAGAGACGACTTGCAGAGAAAATGGCAGAATTTAAAGCTATGAAGCATACTTCTCCTGAACAAAGGCATTCCTTGAACAAGCCAACTGAGGAGCACTCATGCTCATCCGCCTCAAACAATATACAACCAAGAATTGTTGAAGCATTGCAACTAAATCAGAAGAGGCCTGCTATGAAGATACAACCAAGAATTGCTAGAGAATTGCAGCTTAATCTGAACAAACATGCTAGGAAGGTACAACCAAGAATTGTTGAAGAATCTCAGCTTAATCATAACAGACATGATGGGATGGTGCAACCAGGAGTTGCCAGAGAATTGCAAGTTAATCAAAATATGCATGTTATGAAGGGGGTAGTAAAAGATGTGGACAATCACAATTGTACCAAGCAACCAAAAATGACAAAAAAACGTTGTGGAGAAACAACAAGCAATCATGCCACAAGTAAACGCTCTAAAGTTCCAACTGTGATCACTCAAATTGCTGCTGAGGGGGTACAAAAGCATATGGCCAGGTACAATAACAACAAGCCTACTGAAATTGAAGGGGCCAATGTGGGAACAACTAAACATGCTAATGTCAAAAGGGCAACATTAGCTTGTGAAAATGTGGTTGAAGAAGTGTCACCTCAGTGCAATGGGGAAGTGACAAAAAGAGGGCGAAAGGAAGAGAAGGGAGGGAAAAAGAAAGCCATTACCCCCAATGGCGATGAGAAGCCGGGGCGCAACAATGGTGAAGCGGGCGGTGCCCGGATTGGGGAAAACAGCTCCGACGATGGACGGGTTTCAGAGAGGCACACAATGGGGTCGCCGAACTTCGGAGAACTCGGCAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAKERRYFNLDECLKDYVMRSAHKKWKDFKNRLKAKYFDPKKTNKELWKKHDSRISLKVWKWLVCFWRSEKGKARSNRGKANRAKMVAVHTIGTRSLANVRHDMEKRKGRKVSRAEVFKVAYTRKDGRPQPAHEVTIAKIEEKLTEEPEFVDKPIEEGDYLSNLLGKENRGRVIGIGMGPTLASLGLPGTKSTARTSLQLEREARHRAEEEVRALKEGKQQLEERMKEQMERRLAEKMAEFKAMKHTSPEQRHSLNKPTEEHSCSSASNNIQPRIVEALQLNQKRPAMKIQPRIARELQLNLNKHARKVQPRIVEESQLNHNRHDGMVQPGVARELQVNQNMHVMKGVVKDVDNHNCTKQPKMTKKRCGETTSNHATSKRSKVPTVITQIAAEGVQKHMARYNNNKPTEIEGANVGTTKHANVKRATLACENVVEEVSPQCNGEVTKRGRKEEKGGKKKAITPNGDEKPGRNNGEAGGARIGENSSDDGRVSERHTMGSPNFGELGK</aaseq>

Gene Sequence

<dnaseqindica>1..15#329..532#614..706#788..886#955..1353#1446..1502#1596..1652#2001..2057#2157..2213#2323..2463#2580..2699#3104..3149#4340..4518#ATGGCAAAAGAAAGAGTAAGTGGAGGAAGGGTAGAAATAAATAAGTATGAGCTTCAGCGCATGATGCAAATAGAAGAAACTATGAAGTCCTTGTGCAACACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATGTCTGGGATAACGTGAAGGTACAATCCTCTTCTTTTTATTCAACATTATAAGTGTTTCATAAATATTAGTATTTTACAAGAAGTTTTGCTCTGAAACTTATTGTATACTCTACTTTCAGAGGTATTTTAACTTGGATGAATGCTTAAAGGATTATGTCATGAGATCAGCTCATAAGAAATGGAAAGATTTCAAAAATAGGCTGAAAGCTAAGTATTTTGACCCTAAGAAGACTAATAAAGAACTTTGGAAAAAACATGATTCAAGAATATCACTAAAAGTCTGGAAGTGGCTTGTTTGTTTTTGGAGAAGTGAGAAAGGCAAAGTAAGTGCCATAGTTCAAATGTTCTGTATTCTTTTCTTGATTTGCAAAACATATTGACATACATTGCATATATGCAATTAGGCCCGCAGCAATCGTGGAAAAGCAAATCGTGCAAAAATGGTTGCAGTACACACCATTGGAACTAGGAGCTTAGCAAATGTTCGTCATGATATGGTTAGGCTAAGAAATTTTATTGATCTATCCATTTATTTTTCTTCCATTGAACTAATACCTTCTGCAATCACATGACCACAGGAGAAAAGAAAAGGTCGAAAAGTTAGTCGAGCAGAAGTTTTCAAAGTTGCATACACCCGTAAAGATGGTAGACCACAACCAGCTCATGAAGTAACAATTGTAAGTAAAATTTATTAAATGCCAAATTGCATCTCTTTTTGAAATTAACCATGTCTTCACTAATGCAGGCTAAAATTGAGGAGAAACTCACCGAGGAGCCAGAATTTGTGGACAAACCCATAGAAGAAGGAGACTATCTTTCAAACTTGCTTGGTAAGGAAAACAGAGGTAGAGTGATTGGAATAGGTATGGGTCCCACTCTTGCAAGTCTTGGTTTGCCAGGAACTAAATCAACAGCAAGAACAAGCTTACAGTTGGAGAGAGAAGCAAGACATAGAGCAGAAGAAGAAGTCCGTGCTTTAAAAGAAGGGAAGCAACAACTGGAAGAAAGAATGAAAGAACAAATGGAGAGACGACTTGCAGAGAAAATGGCAGAATTTAAAGCTATGAAGCATACTTCTCCTGAACAAAGGCATTCCTTGAACAAGCCAACTGAGGAGCACTCATGCTCATCCGCCTCAAACAATGTAAAAGATCATAGTTCATTTTGCATAACCTCAATTGTACTGGTATTATTATTCAGGAACTATAAACTTCTATCTTTTTTCCTTGATTTTAGATACAACCAAGAATTGTTGAAGCATTGCAACTAAATCAGAAGAGGCCTGCTATGAAGGTAACTTGGATGACATTTACTTTTCTCCATATTTTTCAACTCAATGTGCTAGTCTAGTTTCATCTAATGGTTTTTTTCCTTTGTTGAATACAGATACAACCAAGAATTGCTAGAGAATTGCAGCTTAATCTGAACAAACATGCTAGGAAGGTGAGCTAATGGAAACTAATTCATTTCCTTCGTCTGAAGTACTTCTAGAATAGTCCTAAAGTTAGGACATGGTCTAGAATAGTCTAGAAGCTGGTGCATGTTAGTTTGAAATATGATTTTTGGTGAATGAAATGCAGGTAGCCATCTAGCTTGCTAGTTGCTTTATTCTTCTCCTAGCTGTTGGTTGCTTTATTCTTCTTTGTTTGTCCCCCTGGTCAAGCTCTTCTTGAACAGATAGTAGTTGTGCTTAGTACGATGCACTAACAATAACTTCGACTTTACTTTATCTTGTTCAAGTCAATGCACTAGTATTGTTTGCGGCATTAAGAATTATTTTTTAAAATACAGGTACAACCAAGAATTGTTGAAGAATCTCAGCTTAATCATAACAGACATGATGGGATGGTGAGTGAATAACAATGACTTTGCTTCATATTTTTCAAGTCAATGCACTAGTATTATTTGGAATTAGTATAAACTTCTTTATTTTTTTGTTGAATATAGGTGCAACCAGGAGTTGCCAGAGAATTGCAAGTTAATCAAAATATGCATGTTATGAAGGTAAGCTGAATAACATCGATTTTACTTCATTTTCAAGTCAAACTGTAACATATCTTAAGTCTTGTAGGATTCATTGAGAAGGGTTGATGCTACATGTAATGTACAACAGGGGGTAGTAAAAGATGTGGACAATCACAATTGTACCAAGCAACCAAAAATGACAAAAAAACGTTGTGGAGAAACAACAAGCAATCATGCCACAAGTAAACGCTCTAAAGTTCCAACTGTGATCACTCAAATTGCTGCTGAGGTTTGTATATGGATATATGGTATTTATTTGGAACGCACTATATTACCACCATGCATTTCTGTTGCTTAATGCATGCTAATAGGTTGACAACAGTAACATCTTCTATTGTGTAACAGGGGGTACAAAAGCATATGGCCAGGTACAATAACAACAAGCCTACTGAAATTGAAGGGGCCAATGTGGGAACAACTAAACATGCTAATGTCAAAAGGGCAACATTAGCTTGTGAAAATGTGGTTAGTTCTTTTTTATTACTACAAAACAGTAGCAACTATTCTACTTTCTACTCTGTAATAAAATCTGATGTGGCCACATTTTGAAATAGGTTGGAAGGGATGTCTTTCTTAAGAGAATTGTCCATCCATATAACCGTGTTGCAAGAGCTACTATTCAAAGTCAAGACCCTTAGAAATGGTCGGAGGAACAATGCTGGGAAGGGAGTGCTACAAAGTAGTGATAGACAGTCTTATATGTGGAGATGTTGAATTGTTCCGGCCGCACAGAAATTTGAACTATATTAGAGACGCTATTGGTCATTGCATTGCATGGCCATCCCAACTAGTATGTTCCTTTCCTGGCTTCTTTATTTTATTGCTTAGTTTATATAGCAAGTCTAACATGGTAAATATCAATTTGAAAGGTTGAAGAAGTGTCACCTCAGTGCAATGGGGAAGTGACAAAAAGAGGTATATGTGCCATTTATGTTGACCGAGGCGTAGAAGGCTAGCATCGGCGCGGTCTGTATCCCATAGGCGTGCGCGGCGCGAGCGGGGAGGAAGTCGGATGCGCCGGACTGACCGAGGCGTAGAAGGCCAGCATCGGCGCGGTCTGTATCCCATAGGCATGCGCGGCGCGAGCGGGGAGGAAGTCGGATGCGCGGCGGCAGCAGGAAAGGGCCTCTCGGGGGCGGCCGTGGCGGGAGAGCGCAGAGAGGATGGCGGTGTAGGACGAGTAGGCGAGGGAGGGAGAGAGGGTTGACGGGGAGAGCGCGCCACTCGCCGGCGGCAGGCCCCGAGGTCGAGCACCCGACGCGTTCGAACATCTCCACCGCCGAGCTCGCCGTCGCGCCGGACGCCACCTCTCCTCCTCTCCCGCCACCGCCATCGCGCCGGCCGCCTCTCTCTCCCTCTCCTGCCACCGCCGGCCACCTCTCTCCCCCTCTGTCGCCGCGCCTGCTCAAGAGAATCCGGAGAGAAGAGAAGAGAAAAGAAAAAAAATTTTGAAATATTGGACCCACACCATTTTCTCACTTATATGTGGGCCCAACATATTAATTTTAATTATTTTTACTGATTAGGCCTCTATACTACCCTGGGACCTTTTATGTATGGTTTTACATAGCTCGGGGTATATATTTCTGGTTTTGTGGTTGAGGGACGGCCGGTGAACTTATTCCACATGGAAAGGAGGGGGTTGGTGGATTTCGGATTCTGGACCATGAGGGAGGAGGAGATGTTGTGGTGGGCAAGGCTTACTAGGCCTTGAGGCTTTGCAAGTTACCAAGGACGTCGGCCTAGCTTGTGGCCGCCGCATCTCGCTGGACGCTGGCGCAATGCGGGCCCGCTGAGCCCAACGTGGCAGCCATATCATCTGTTAACCGGAGGGAGTTGACCCCAGGCGGGATCGACGACCGGCAGTGCTCCAGCGAACGGAGGCACAAGAGGGTAAAGTGGAGGTGGAGCATAGGATTGGAACGAGTGGAGAAGGACGACGAGGATAGACGGATCAGTTAGGCACTGGATCGCTCGAGATGACCGGCGGTGAGTGGCAGAGTAGGTCCGTTGCCAAGCTACATCGATTCGCTAGCAGCGACCAAATTCACAGCGAAGGGGAGAAGGTTTGGCTTTGGGATGGAGTGCTGGTTCGAACGCGACAGGGCGAAAGGAAGAGAAGGGAGGGAAAAAGAAAGCCATTACCCCCAATGGCGATGAGAAGCCGGGGCGCAACAATGGTGAAGCGGGCGGTGCCCGGATTGGGGAAAACAGCTCCGACGATGGACGGGTTTCAGAGAGGCACACAATGGGGTCGCCGAACTTCGGAGAACTCGGCAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036482

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