BGIOSGA036534

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Revision as of 08:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036534| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036534, complete gene.| tag = OsI_376...")
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Gene Name

BGIOSGA036534

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036534, complete gene.

LocusTag

OsI_37672

Ensembl Transcript ID

BGIOSGA036534-TA

Ensembl Protein ID

BGIOSGA036534-PA

Length

3453

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4250243..4253695

Sequence Coding Region

4253630..4253695,4253377..4253499),complement(4252910..4253030,4252737..4252837),complement(4252547..4252634
,4251450..4251517),complement(4251282..4251368,4250707..4250781),complement(4250543..4250620
,4250342..4250446),complement(4250243..4250260

Genome Context

<gbrowseImage1> name=IndicaChromosome12:4250243..4253695 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:4250243..4253695 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTCGTCCACCGCCTCCTCCGCCGCGGCCTCTCCGCCGCCTCTCCCCTCCCCTCTCTTCAGGAGCTCGGGAGGCGTCCGGCGAGCTCGTCGGCGGCGGCGGCGGGGGACGCGGCGGCTGAGCTGCGGGGCGCGCGGGAGGACGTCAAGCAGCTGCTCAAGTCCACCTCCTGCCATCCCATCCTGGTTCGGTTAGGGTGGCATGATGCTGGTACTTATGACAAGAACATTACTGAATGGCCAAAGTGTGGTGGTGCCAATGGTAGCTTGAGATTCGAAATTGAGTTAAAACATGCGGCTAATGCAGGTCTTGTGAATGCTTTGAAGCTGATCCAGCCCATCAAAGACAAGCATGCAGGTGTCACTTATGCAGATCTGTTTCAGCTCGCCAGTGCTACAGCCATTGAGGAAGCCGGTGGCCCCAAGATCCCCATGATCTATGGAAGGGTTGATGTTGCTGCCCCCGAACAATGCCCGCCAGAGGGGAGACTTCCTGCTGCTGGCCCTCCTTCACCTGCGGAACATCTACGAGAAGTATTCTATAGAATGGGCCTGAGTGACAAGGAAATTGTTGCATTGTCAGGAGCTCATACACTTGGACGATCTAGACCAGAGCGCAGTGGATGGGGCAAACCAGAAACTAAATACACTAAAAACGGACCTGGTGCACCTGGAGGGCAATCTTGGACATCACAGTGGCTGAAGTTTGATAATAGCTACTTCAAGGACATCAAAGAACGCCGAGATGAGGACCTTCTAGTTCTGCCTACTGATGCTGTGCTCTTTGAGGACTCATCATTCAAGATCTATGCTGAAAAGTACGCCGCAGATCAGGATGCATTTTTTGAAGACTATGCTGAAGCTCATGCCAAACTGAGCAATCTCGGAGCAAAGTTTGATCCTCCAAAGGGTATTTCACTGGAATAA</cdnaseq>

Protein Sequence

<aaseq>MAVVHRLLRRGLSAASPLPSLQELGRRPASSSAAAAGDAAAELRGAREDVKQLLKSTSCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFEIELKHAANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVAAPEQCPPEGRLPAAGPPSPAEHLREVFYRMGLSDKEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE</aaseq>

Gene Sequence

<dnaseqindica>1..66#197..319#666..786#859..959#1062..1149#2179..2246#2328..2414#2915..2989#3076..3153#3250..3354#3436..3453#ATGGCCGTCGTCCACCGCCTCCTCCGCCGCGGCCTCTCCGCCGCCTCTCCCCTCCCCTCTCTTCAGGTACTAGTACCACCTACGACGCCTCCCCCCCTCCCTTTCGCTGTTCATTACCCGCGCCGGCGGCGGACCGGTTCTTGATTTAGCGATGTCCCTTTCTTGATGATTTTTGTTCATTTTCTCCCCCGTGAAGGAGCTCGGGAGGCGTCCGGCGAGCTCGTCGGCGGCGGCGGCGGGGGACGCGGCGGCTGAGCTGCGGGGCGCGCGGGAGGACGTCAAGCAGCTGCTCAAGTCCACCTCCTGCCATCCCATCCTGGTATGCTAATATATGCTTTGCTGCTTTAGTGTTCTTGTGCAAAGATTGCGGGTTTGTATGGTTCGAAGAGTATAATGGGATTTTAGATTGTCTAGCTATATCCATGGATTTCGCATCTCTACAAAAGATTGTTCTTTGTGTGTTTAGTTAACTGGTCGATTATGCTATGTAAAACAGTAACTTTTACTTCGAGAAGATGCAACTGCTCTAGTTCACCTGTGTGCAAGAAGACTGTAACACGTTCTATGCACAATATTCGCTAGATTTGTGCAGTTCATGGTTCTGCATCTGCTTGATCGAACATTGCATATTTATGACTTGTCTGCTGGGTTAACCTTGGTTGCAGGTTCGGTTAGGGTGGCATGATGCTGGTACTTATGACAAGAACATTACTGAATGGCCAAAGTGTGGTGGTGCCAATGGTAGCTTGAGATTCGAAATTGAGTTAAAACATGCGGCTAATGCAGGTAGTGCTTCTGTTCTGTCATTATCTATTGTTCGTGATTCATGGTTATCCTTACAATAACCCTCTACTTCAGGTCTTGTGAATGCTTTGAAGCTGATCCAGCCCATCAAAGACAAGCATGCAGGTGTCACTTATGCAGATCTGTTTCAGCTCGCCAGTGCTACAGCCATTGAGGTCCTTTTGTCACTTTAGTCTAATGATAACTATGAACTATCATTCAAACAGTATTTATTATTTAATGCTTATATGATTGCTTTGGTCTGTTTTAAAACTCAGGAAGCCGGTGGCCCCAAGATCCCCATGATCTATGGAAGGGTTGATGTTGCTGCCCCCGAACAATGCCCGCCAGAGGGGAGACTTCCTGGTCAGTAGCTTTTGGGTTCTGTAGCCCAAATTTGTTCGTTACCGTGATTTATCATCTGGAAACTAAAATATAATGCTGTACCTTTAGTGTCATGTCACACTGATCCCAAGTTGCTATTACAATTGGTCATCTTCTTGCAGCTTCATTTCGCAAATTCTACTTTCTCCTTATTCATTAAACCTAGAATATTGATAACTTTCAGAGCAGAACTGATATGTGTTCCAACACTCAGAAATGAAGTTACAAATATACTCTATTGGTCCTCTTGTTTAATCTCAATTTATGGGTTATCATGCAATTGAGATACCTGATTGACATAGGAAATCGCGCATATCCATCTTTATTTGTCTGCAATCTATTTACATCAAAATCAAATTATTTAGATGTAGTGTCAACAATAGAAGACATTAATATAAATTGATAGTTTTCTTGCTAACCTACTGTAATAGTCCTGTTTTATTTCTTCTTTAATGATAAATTTATTTTCTTAAATGGACAATGGTCTGCCTATAATAGGCTATTACATTCGTGGTAATGCCTCTCAGATTCAACTTATTTAGAAGGTTTAGGCGTGGTATCTTATCCATGTATCTATGGGTTTTACTTCATGAAGTACTAAAATTGATGCTAACTGGCTAAAAGCATGAAAAAACAAGTTTCTTATGAAATATTGCCACCGTGAGCTCTGTAATCTGGTGTAATAACATTTTGGACATGCAAATGTGTAAGAAAGATTACCCCAATTGCAATATAACAGAAAAATTGTAAGCTGCACATGCTGTGCAGAATGAAAATCAGTGCTATGATTGCACTTAACCTGTGAGATTGATAAAATATAGCTCCCCAAGAATTGCAGCATTTTCAGCTGTTTGTTTTTGTATTCACATGACATTGATATATTTCCTGCTGTGTCTTATAGTGTACTTTGATATTTGAAATCTAGTGCTGATGATGATCTAATCCTCTTTCATATGCATGTGCTTTCTGTTGCAATTTTGTTCCCTATATTTTACATTTCCACCCTTTCAGCTGCTGGCCCTCCTTCACCTGCGGAACATCTACGAGAAGTATTCTATAGAATGGGCCTGAGTGACAAGGTACTTGCAGATTGCTTCATTCAATATTCCAAACAACTTTTTCTGGGGATTTGCTAGTTACATCTGTTTTGTGATCTGTAGGAAATTGTTGCATTGTCAGGAGCTCATACACTTGGACGATCTAGACCAGAGCGCAGTGGATGGGGCAAACCAGAAACTAAATACACTGTATGTAACTTATATAGTTATATCAGTAGTAGGTTATTGTTCTGATTTTAGTAACGCCTTGTCCATGATTCATTTTGGAGTATTGCATGTTATTTAGTTACTACGTATTTTTTAGATTAGCCAATGGGATAATTAAGTTGTCATCACTGGCAATGCTTATTGATCTTGCATATATCTCTTCCTTGTAAAAGCTCTGTATTGAAGATCTTTATATGATTTATTACTACTTCACCGAAGAAAATAAAGAGATGTTTCTGCGCTGTTGTGTTAGTTGACCATATTATGCTTCATCTCTAATCGCGGATGACCTATATTAGCATCAATGCTACAAACTTTCCTACTACAGTGCTTATATGCTTTCAAATATGTTCTTGTGGGTAGTAGACTTGCAGTATTAACTATATCTAGCATGCACTCCTTCATGAAGTTCTTGCTGATGAATGTTCTGAATGTTGAATTTCTTGTTTGGCTAATTGATTAATTTCTTTTGACTCGCAAAGAAAAACGGACCTGGTGCACCTGGAGGGCAATCTTGGACATCACAGTGGCTGAAGTTTGATAATAGCTACTTCAAGGTAGGATGCACTATTTTCTTTATCAATACCAAACATGATAGCAGTTACAATTTACAAAACTTATGTTAGTCTGCATAAAATTTAAGGACATCAAAGAACGCCGAGATGAGGACCTTCTAGTTCTGCCTACTGATGCTGTGCTCTTTGAGGACTCATCATTCAAGGTTAGTGAAGATTCTCATCAGCTCTTGTTGTAAAGAACTGCAAATCAAAAGTGACGCTCTAAACTAAAAAGTTTTGCTTGCTTGCCATGCCTGAAGATCTATGCTGAAAAGTACGCCGCAGATCAGGATGCATTTTTTGAAGACTATGCTGAAGCTCATGCCAAACTGAGCAATCTCGGAGCAAAGTTTGATCCTCCAAAGGTAAGTGAGATTAAAGACTAACATTACTGGAATTAAAAAATGTGCAGTCAACTTGACATGGTTATCACTGAAATGACACAGGGTATTTCACTGGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036534