BGIOSGA036548

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Revision as of 08:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036548| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036548, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA036548

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036548, complete gene.

LocusTag

OS12G0172500

Ensembl Transcript ID

BGIOSGA036548-TA

Ensembl Protein ID

BGIOSGA036548-PA

Length

5731

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3974581..3980311

Sequence Coding Region

3980135..3980311,3979397..3979711),complement(3979206..3979314,3979018..3979120),complement(3977648..3977735
,3977466..3977549),complement(3976750..3976846,3976564..3976651),complement(3975615..3975720
,3975431..3975523),complement(3974581..3975012

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3974581..3980311 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3974581..3980311 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAGCGGCGAATTCCTCGGCCTCCGCGGCGGGGGCCGGCGGCGGCTCCGCGGCGGCGGCCGGGCTCAAGACCTACTTCAAGACCCCCGAGGGGAGGTACAAGCTGCAGTACGAGAAGACGCACTCCGCCGCCGTGCTTCACTACAACCACGGCGGGAAGACCGTCTCGCAGTTGACGGTAGCGTATCTCAAGGAGAAGCCTGCCGGACAGGGCTCCACGCCTTCCACGCCAAGCTCCAGCAGCGGGATGCGTTCTGCAGCAGCGAGGCTTCTTGGCTCTGGGAATGGTAACCGGACGCTTAGCTTTGTTGGGGGAAATGGTGTAAGCCGGGCTGTGTCTGGGAGCAGCCGCATTGGGGGTGGCCTTGGTACATCCGGAGGCATTGGTAGTTCACAAGCTGTGGCAAATTACGATGGCAAGGGTACATACATCATTTTCAACACCGCTGATACATTATTCATCAGTGACCTCAATTCTCAAGACAAGGATCCAATAAAGTCCATCCATTTCAGCAACTCGAACCCACTATGCCATGCATTCGACCCAGAGGCCAAGGAGGGACATGACCTGATCATTGGGATGGGGTCAGGGGATGTCTATTCAATGTCACTGAGGCAACAATTGCAAGATTCTGGAAGGAAGCCTGTTGCGGCCCAACATTACAACAAGGGTGATAAAGATGGAACAAGCACTGGCAGCCGATGCACTTCTGTTGCATGGGTACCGGAGCGTGAAGGAATCTTTGTTGTTAGCCATTCTGATGGAAATCTGTATGTGTACGATAAATGCAAAGATGGAAACACTGAGTGTACATTCCCAGCTATAAAGGATCCGGCTCAGTTAATGATTTCACATGCAAAGTCCAGCAAGAGCAACCCAATTGCTAGATGGCATGTTTGCCAAGGTTCAATCAACGCCATCTCCTTTTCACCAGATGGAGCATATTTAGCAACTGTTGGGCGAGATGGTTATTTGAGAGTGTTTGACTTTTCGAAGGAGCAACTAATATTTGGTGGGAAAAGTTATTATGGTGCACTATTGTGTTGCACATGGAGCTCGGATGGCAAATATCTGTTGACTGGTGGTGAAGATGATCTTGTGCAGGTATGGAGCATGGATGACAGAAAGATAGTCGCGTGGGGCGAAGGGCATAATTCCTGGGTCAGTGGAGTTTCTTTTGATTCGTATTGGTCTCCTCCGAATTCTGATGGAACAGGAGAAAATACCGTGTATCGTTTTGGTTCTGTTGGTCAGGACACACAACTGCTTCTGTGGGACCTGGCATTGGATGAGATTGCTGTCCCACTACGACATCCTTCCAGTGGCTCACCAACTTTTAGTAGCGGCAGCCCTTCTGCACATTGGGACAATGCATGTCTCCCAACAGGTGTTCTTCAACCTTCTCCAAGAATGCGAGATGTGCCAAAGCTCTCACCCCTTGTTGCCCACCGAGTACATGTGGATCCACTCTCAGGTCTGGTGTTCACTAACGAATCAATTCTCACTATTTGTCGTGAGGGACTGATCAAAATCTGGGTAAGACCTGATCAGAACGAAAACAATCATCAGTCAAACTCTTCGGAGTTAGTTTTAGGTAACCCTGTTTCAAAGGATAGGGTGATCACAACTTCAAATAAAGCAACCGGTTCCAGCTTCAAGCAATCTTCAGCTGTTGTCTTCACATGA</cdnaseq>

Protein Sequence

<aaseq>MAAAANSSASAAGAGGGSAAAAGLKTYFKTPEGRYKLQYEKTHSAAVLHYNHGGKTVSQLTVAYLKEKPAGQGSTPSTPSSSSGMRSAAARLLGSGNGNRTLSFVGGNGVSRAVSGSSRIGGGLGTSGGIGSSQAVANYDGKGTYIIFNTADTLFISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGRKPVAAQHYNKGDKDGTSTGSRCTSVAWVPEREGIFVVSHSDGNLYVYDKCKDGNTECTFPAIKDPAQLMISHAKSSKSNPIARWHVCQGSINAISFSPDGAYLATVGRDGYLRVFDFSKEQLIFGGKSYYGALLCCTWSSDGKYLLTGGEDDLVQVWSMDDRKIVAWGEGHNSWVSGVSFDSYWSPPNSDGTGENTVYRFGSVGQDTQLLLWDLALDEIAVPLRHPSSGSPTFSSGSPSAHWDNACLPTGVLQPSPRMRDVPKLSPLVAHRVHVDPLSGLVFTNESILTICREGLIKIWVRPDQNENNHQSNSSELVLGNPVSKDRVITTSNKATGSSFKQSSAVVFT</aaseq>

Gene Sequence

<dnaseqindica>1..177#601..915#998..1106#1192..1294#2577..2664#2763..2846#3466..3562#3661..3748#4592..4697#4789..4881#5300..5731#ATGGCGGCAGCGGCGAATTCCTCGGCCTCCGCGGCGGGGGCCGGCGGCGGCTCCGCGGCGGCGGCCGGGCTCAAGACCTACTTCAAGACCCCCGAGGGGAGGTACAAGCTGCAGTACGAGAAGACGCACTCCGCCGCCGTGCTTCACTACAACCACGGCGGGAAGACCGTCTCGCAGGTGAGCTCGCTCGTCTCCGGGAGGGGATCTAGATTGGGGTGGCGTCGGACTCGCGTCGAGGGTTTCCACGGTTTTTGCAGTGTGTTAGTGGGATCTCGATTGGCTTCGAGGCGGGTTCTAGAGGAACATTTTTTTAGGTAGTCCAAGTTTTTAGGTCGCTGGTGCAGATTTTAGATGGCGCTAATTTATTTCATGAACAACTTACGTCGCTGCTAGCCTTATAGAGATCTTATTCGTTAGATTTTAGCGATTCGTTGAGTTGATAAGGTTGCAAGTTCAATCGGTAGATCTCTCTCGATCATGTGGTAGTAGTGTCTCAGCTTGTGTAATGCTTAGTTGTGCTGTGTGGCCTATATGTGTTATTCCTGAAAATAGTTTTTGTGGCGTTGTAAGTGCTGTTGTTGATGGTTCTAGTTATTGCAGTTGACGGTAGCGTATCTCAAGGAGAAGCCTGCCGGACAGGGCTCCACGCCTTCCACGCCAAGCTCCAGCAGCGGGATGCGTTCTGCAGCAGCGAGGCTTCTTGGCTCTGGGAATGGTAACCGGACGCTTAGCTTTGTTGGGGGAAATGGTGTAAGCCGGGCTGTGTCTGGGAGCAGCCGCATTGGGGGTGGCCTTGGTACATCCGGAGGCATTGGTAGTTCACAAGCTGTGGCAAATTACGATGGCAAGGGTACATACATCATTTTCAACACCGCTGATACATTATTCATCAGTGACCTCAATTCTCAAGACAAGGTCTGTACCTTTTATAATGGTTTAGTGTGAAATGTAGTTTCTAGTGTTTATTGTCTGCTGATAAGCCTGATAACTGCACCAGGATCCAATAAAGTCCATCCATTTCAGCAACTCGAACCCACTATGCCATGCATTCGACCCAGAGGCCAAGGAGGGACATGACCTGATCATTGGGATGGGGTCAGGGGATGGTTAGTATCGTTATTAGCTTGAATCACTCCATTTTTTGAAGTGTATTTTGTATAATCACGAGTTTTATATTTGCCCATTCTGCAGTCTATTCAATGTCACTGAGGCAACAATTGCAAGATTCTGGAAGGAAGCCTGTTGCGGCCCAACATTACAACAAGGGTGATAAAGATGGAACAAGCACTGGCAGGCATGTTTAAATTTTTCACTTTTCATTTAGGTGTCAGATATGATTGCTTGACTTAGTTGGCACTTACTCCCTCCATCCCAAAATATAAGAACCTAGGACCGGATGGGACATATCCTAGGTATAAGAATCTGGACAGCATTAGGAAATGTCCTATCCCGGTCCTAGGTTCTTATATTTTGGGATGGAGGGAGTAGATTTGTATCACCATTGCCTGTTAAATATTTTGGCTGCATGTTTCCCTCCCTTCCTGCAGTGAAAACCAAGTGGCATCTTTGAATATACATGGTCAAACTTTAACTTTGGTCATCAAAATTGTCATGAACATTAAGATAAGATGTGGAAATAACATTGGGAGGTCTTCCTGGAAGACCAAAATATTTGTACATCCTGTAGTATATGCGCTATGATAAAAACTGGTAGTGTTGTGTTTGGGGAACTGTGTTGATGTCCAAAACGTAACTTATCTTTAATTGTTGAGGTTTTGACAGTTTAGCACATAAGACTTTTTTTTGGGGGTCAAGTTGGCATAAATGCAAGTACAACACATCAATACTCATGCTCATGTGATATAGACGTACATTGCTTTGAAGTATCAGATGGACAGCAAAATTTGAAAGGTAGCAAATTTATTTGCGGTCAGAAGGACTCCCAAATCATTCTAAAGAAGTACCATAGAGTTCTTATTTGGGACATTGGAATAAATCATTGCGATGCTTTGAATCTAATGCTGAGCTGATTCTTTCAGTTGATCAATCTATGGTAGTAACGAGCTTTTGTTATTTAAATCTGCTCTCTGTTAGTTCGTGTGCTATCAATTCTGAGCTCTCTCTCCTGTACGAAGCCAACATATTATGGAGAAAGAAGGATAACCTTATTTCATTTTGTTATTGCCATCTGCTGTTGCATGGCACCTGTTTACATGCTATCAATTCATAGAAGCGATAAATAAAGGAAAGTAAATCTTGCATTGCTGATGAACTTTTCTTCTCTTAGTCTAAGAACTATATCATTATATTTTAAGTCATTAATCGATAGGATGGAACTGCTACATATTAATGATTTTGTAATACAGCTACATGGATCATTGTATGGGCAGTTGTCATCAAGATGCCTAACTTCTTCTTGTTATTTAATTAACCTCTAGACACTATTGTTCAAAACAGAATGCTGTTTACATAGTCATCCTTGCAGATGCTTATCTTTCTCTTATTAGTGAATTGAATTCTCTAATTAGGGAATTGAATTCTCTAATTAACTTGTGGGTACTACCTTTTTTTGGCAGCCGATGCACTTCTGTTGCATGGGTACCGGAGCGTGAAGGAATCTTTGTTGTTAGCCATTCTGATGGAAATCTGTATGTGTACGATAAAGTGAGCAGATGTTGGTTATCGGATTTGGTATTTTAAAATCTGGTTTCTGTTTGGTGGATGATTGAACTGATGTATATTGATGTACTATTTATATTCAGTGCAAAGATGGAAACACTGAGTGTACATTCCCAGCTATAAAGGATCCGGCTCAGTTAATGATTTCACATGCAAAGTCCAGCAAGGTATGTTAGGCACTTCAAGAATTATTTTAGTTAAGTATGCTTTAGTATAGAGGTATATTCCCCCTTTGTTAACATGGATGTCTACAGGGTAGTCTAGTATTCTGAACCTTGAACATATTTCTTAAATCAATGAACATACTTATTTATCGCGCCATGTAGAGCATGGAAATAGCATTGCAAACAGTGATAACTACCAGTTCTGCACCTATATTCATGCTTAAGTGCACTTATAGAAATGTTTAATAGTCCTTTAAAAATGATGGTTTTTGCTCATGCTCGCTTTTGATAGTTTGATTATGCAGTAATTAAATTTTTAATAGAAAAGGCTATCATGGCAGTTGGTTCCAACAATTATGCACTTGTTCTGGCCTCCAGTTATGTACAATGCTAAGTTTCGTGACTGGTATTTTACAACAAGAACTTTACTGGCAAATGCCAACCACCCGATAGTATATTCCAAATAGCATACATCATATAAAGTGAATGTTGGCAAGTAACTCCATTATCCTATATTTTCTACTATCTTAGAAATATGTTTTTTTGTTGCAAAACATGTGGTTAGAGGAGTTCGTATGAAGGTGCCATAATTAACTTTGGATTCATCTCAAAATCATTTCAGAGCAACCCAATTGCTAGATGGCATGTTTGCCAAGGTTCAATCAACGCCATCTCCTTTTCACCAGATGGAGCATATTTAGCAACTGTTGGGCGAGATGGTACTTCCTTTGTCCCAATAGTAGATGGTTCTTTATTCCTTATAGAACCCACTGATTCTGTATTGCTTATTAAAATAACACTATAAAACCTTATTTAGGTTATTTGAGAGTGTTTGACTTTTCGAAGGAGCAACTAATATTTGGTGGGAAAAGTTATTATGGTGCACTATTGTGTTGCACATGGAGGTAATTGGAATCTCCACTTTTACATTTGCCCTATCTTTGCTAGTTAGTTCTATGATTTATCTATTCCCACTGTTTGGCTGTCCTGTCCCAAAATATAGCATTTTTTAGAGGATGACACATGTATTAAGGATAGGGGTAGAAAGACTTGTTTGCCTTCTCAGGATGGGTGAGGTATAGGCCTGGTCGCCTGGACTACAATAGAGACAAGGATAGTAGGGGTAGTATGGGTAGTTTAGTGGCAAAAGTTACCTTTTACATGTCCTAGGTTGCTACATTTGGGACAAAATGAACTCAAAAACTTGCTACATTTTGAGACCGAAGAGCTTTATGAGGCAATCCTGAAACGTGTTTCTGTTAGTTTTAGTTTTTTAACTCTACACCCAGCTTGGGATGAACAGCATGCCAAACTTAATAATTCTGCTGATTTATGAGCCATTCCGGAAAAAAAATGTTTCTGTTTGTAAGTTTAGGTTGAATAGCATGCCAACCTTAACTAATTTTGCCGGTTGCCTGCCTTTCTGCCAGGCTGCTTGTTACATGTGAGGAACTTTTTTGGTTTGCATAACATTACGGTGTACTATGCCTATTCCCCTGTATTTGGGGTAACAAATTAACAACACAGTTTTTGGCGCCACTAGTTTCTAGCACGGCACACGTTGAGGCACATCTCTGGCCTGGTCTCTACCATGTCATCAGGTTTCTGCTCCGTGGCATTTTATCTGCTAATTGTTTATCACTAGTTTATGCGACTTTGAATTATCAGCAACTATTTGTGTTTACCACTGGATTATCTTCCACAAATTAGTTCCTCTTACCTTATTTTATCATGGTCTGTTTTTACAGCTCGGATGGCAAATATCTGTTGACTGGTGGTGAAGATGATCTTGTGCAGGTATGGAGCATGGATGACAGAAAGATAGTCGCGTGGGGCGAAGGGCATAATTCCTGGGTACAACTTAACTTGCCTAAAAAATTGTCAATGCCACGATGTTTCCTGTCAATAGTTGTAATTGAGGACAAGGTCAATTTTATGTTGACAGGTCAGTGGAGTTTCTTTTGATTCGTATTGGTCTCCTCCGAATTCTGATGGAACAGGAGAAAATACCGTGTATCGTTTTGGTTCTGTTGGTCAGGTATCACAAATTTATATAGCTGGAGATATAGTATGCAGTCTGTGCTTTTATGACATGTCCTTAATGTTTAACTCATGTAGTATCAAAGTTTCTTTTTGAGAAGTGTAGTAATCAATGTTAATAAGCAATCATAAGATGCTTATTTCTCCGTCCACTCTTATGCTGTTGTTTGGCTTTAAACTGATCAAACTATGTATGTAGCTGGATGTGCTAACTTCTTATCATACTCGTGCTATTTTCTCGCTGTACAATCTATGACAATGTTTTCTGTTTATGTTAATCAACTTGGTTAGTTATTAATATCGATTCTTGCTCATATGGTTAGTTATAGTGATGAGATTCATTTGGGCAAGTTATTTGGCAATTCTTTTTACATGTTCTAACGCTGGCATAACTTTTCACTGTTTCATGCTCCTAGGACACACAACTGCTTCTGTGGGACCTGGCATTGGATGAGATTGCTGTCCCACTACGACATCCTTCCAGTGGCTCACCAACTTTTAGTAGCGGCAGCCCTTCTGCACATTGGGACAATGCATGTCTCCCAACAGGTGTTCTTCAACCTTCTCCAAGAATGCGAGATGTGCCAAAGCTCTCACCCCTTGTTGCCCACCGAGTACATGTGGATCCACTCTCAGGTCTGGTGTTCACTAACGAATCAATTCTCACTATTTGTCGTGAGGGACTGATCAAAATCTGGGTAAGACCTGATCAGAACGAAAACAATCATCAGTCAAACTCTTCGGAGTTAGTTTTAGGTAACCCTGTTTCAAAGGATAGGGTGATCACAACTTCAAATAAAGCAACCGGTTCCAGCTTCAAGCAATCTTCAGCTGTTGTCTTCACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036548

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036548&oldid=52853"