BGIOSGA036552

From RiceWiki
Revision as of 08:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036552| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036552, complete gene.| tag = OS12G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036552

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036552, complete gene.

LocusTag

OS12G0170100

Ensembl Transcript ID

BGIOSGA036552-TA

Ensembl Protein ID

BGIOSGA036552-PA

Length

3851

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3858817..3862667

Sequence Coding Region

3862633..3862667,3861304..3861853),complement(3858817..3860067

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3858817..3862667 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3858817..3862667 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGGTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGACGTTCCACCAGAAGCTCATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTTCTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTTAATGATGGCAATACATTGGATAGAAGTGAGCTCTTTTATGTCCTTCTTAGTCTTCGGAGGCGGAAGCTCTACATCAAAGCCTTGCAGCTTCTGGAGTATGTTGAAGAATCCAAACTAATTGATCTTGGAGAACGTGATTATGCTTCACGCGTGGATTTGGTAGCTAAAACCCACAGTATTTACAAAGCTGAAAAGTATATTGAGAATGTTCCTGCATCTCATAGGGGTGAGATTGTATACAGGACTCTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAAAAAGCAGAACAAGTCTTCAATAAGATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCTTGCAATCAGCTTCTGCTACTCTACAAGAGAGTGGACAAGAAGAAGCTTGGTGATGTTCTCACAATGATGGAAAAGGAGAATGTGAAGCCTTCCCTCTTCACTTATAAGCTCCTTGTAGATACCAAGGGTGCTGCTAGAGATATTGAAGATATGGAAAAGGTCATTCAGGCAATGCAAGCGGATGGAATTGAACCAGATCTTCTGTTTCAAGCCACAATTGCAAGGCACTACATATTTGGTGGTTATCGTGAGAAAGCTGAGGCAATTTTGGAGCAAATGGTGGGGGATGATATCAATGAAAACCGTTCTGCTTGCAAATTTGTTTTACCCCTGTACGCTTTTCTTGGCAAAAATGATGATGTTGAAAGGATCTGGAAGGTTTGTGAGGCCAATGCTCGTCTAGATGAGTGCATGTCTGCAATAGAGGCTTTTGGTAAGCTTGGGGATGTTGAAAAGGCTGAGGAGATATTTGACAATATGTTCAAGACATGGAAGACACTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGACAAGGGGAAGGAGCTAGCAAAGCGGATGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGCTTCTTGAGGCATATCTGAATGCAAAGACCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCTTTGCTTGCTGCTACCGATCCATTCAACAGGAAGAACGCAATGTCTAAATTGCTCGATTAG</cdnaseq>

Protein Sequence

<aaseq>MWALRRAGNPLRVRAHQALSARGCANLEVILNADAKNVEEHHEGDCQKLDCCHQPKPLVCQPSFSSGRFMWSRGFSSQAGASSGDKQDELEEGFSDLDVPPEAHKKDLDLTSDESSDEDTIDAIGLSEVEADAKPEEPIKKSQSTLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQLLEYVEESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDLLFQATIARHYIFGGYREKAEAILEQMVGDDINENRSACKFVLPLYAFLGKNDDVERIWKVCEANARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNRKNAMSKLLD</aaseq>

Gene Sequence

<dnaseqindica>1..35#815..1364#2601..3851#ATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGTACCTACCTACCCCCACCTCCTCTCTCTCCCCCGCCCTCTGCCACTGTTCTTGTGGGATTTCGTTAACAGATGATTGATTGGTAATAAATCTGTGGCTTATGTTAGTTCGTGTCATCCGTGCCTTTCTCCCACTCGCGTTTTTCTGTCCCTGTTGCGTGGTGGCGACAAGTAGATCCATCCAAATGCCTTGTTTAGTTCTTGGGGGTTTATTTGTGTGATTTTCCGGTGCCAAGTTGTGTGGTGTCCCCGTTAATAGGCCATAGTTTCTTGTTAAGATGGATCATTGGGTCTTGGATGAGTTGATCATTGCCAGTGATTTATTTTTACAGGTGGGGAGTAGGGAGTTGCTGGTATTATTCATCTGATGTTGGGACTCTGTTTTGTTGTAATCTCTTGAATTTCTATGCAAATTGCAGTCTTACCATCTTGGGTTTGACTGAAATATATCAGTCGGATGTATGTGAGAGACATGATAGTGTATCTACTGTGTGTATATGTGCTTGAAGAAGTACCCATCTTAGATGTTTGTCTATGTAGACATGATTATTACTTTGCGTAGCATTATGTACGGAACGATATTAGATGTGTTTGAAGATGGAACAACACCTCTTCTTGTTTCAATCATCTGGTCATGTTATTGTGAAATGAAGCAGATATTTTGTATTTCGTTTTGCATGTGAATCCATGTTCACGATCATAATTTGTACCTATCATCCCATGTTTCATGCGTTGTTAATACTGATATTTGACTTGGCTAACTGTTTGCTGCTGTTTTAGGGTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGACGTTCCACCAGAAGCTCATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTTCTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTTAATGATGGCAATACATTGGATAGAAGTGAGCTCTTTTATGTCCTTCTTAGTCTTCGGAGGCGGAAGCTCTACATCAAAGCCTTGCAGGTGTTTAACTTGGCCTTTACGTGTTTTATTTTTTTCAATGATAGCAAGTCCTTTCTGTACATTTATAATTATTGATAATACATGTAGCGACTGTTATGCTCGTTAGCTTGGCATGTGTTAAGAATGTTACTTTCTGAAACATATTTGCAATGTCAATGGTGAATGAGCTTTTGGTTTTGCACATAAATGAAGTGTTATAGCCTTGTAAAATGTAGCATGCACTAGATGAGGTAGGGGCACTTTAGAATGATATGTCTATATGCTTCTTCTTCAAGTCCTAGAGTATTAAAAAAGAGGAAGTGATGAAGTACTCTTAGTCAACTATGGGAATGATGCTAGACAGCTAGAGGGTGAAGATAAGAAGCACACACAATTTCCTTGACTATTGAAAAATACAATGTTGTTGAGATATCACCAGTTCACCACCTGTACTTCTATGTTACATCCTAAACTTAATTTAGTATGAGAATGTTATTGTGACTTTGTAGATCATGTGAATGGTGGGCAAACTGCATCTTCTTTTCTATAGTATCAGACTCTGAAATTTGTTAGAGTGCTTGTGTTGGTTTTGTTTGTCAAAGGGCGTTGTCTTTTTCTGTTCATTCCATGCACGTTTTGAGTATTACTCCATTTCTTTGATTCCCTCTTTATGCTGCAGCTTTTATTGACCACCATTTTATTTTACTGTTAAGCATTCCAAGCATGTTTACCCCTTAACATACATATTGTGCCATCTGTGCTTTTAAACCTTTCGTTGTAATACTCATGTTTGGTTATACATGATGTTTGAAATAGCGTAGTCATACTTGTTTCTTTTTATGTGCAATCTAATTTGTGACATGATGAAATGAATGCTACCTTTCTTTGTAAAGTACTAGCTAAATTGTGTGTTCAACTGTCTATACTCTTATGTACAAAACAAATTCTTGTTTGTAACTTAGTGGACCATTGTAGCTATCTAATAGATCTTAGTCATGCAGCTATAACTGTCTTAGATAATAACAAAGCCACCTTGCTTCCGAATGCATTTGTACCGCTGCATGGTAAATTTTCAAAATCTCACTATTCTTTGGTTATTTGTAGCTATACACGGTGTTTACTTTGATGGAACTTGTTACGTAAACTTTTTTCATGTGAACAACCTCATATCTAAACACTTAAGCTTTTTTCACTGTAATTATTTACCTCGGTCTTTGTGTTTTCTAACTCAGAAGATATTTACTTCATTTTCTGCAGCTTCTGGAGTATGTTGAAGAATCCAAACTAATTGATCTTGGAGAACGTGATTATGCTTCACGCGTGGATTTGGTAGCTAAAACCCACAGTATTTACAAAGCTGAAAAGTATATTGAGAATGTTCCTGCATCTCATAGGGGTGAGATTGTATACAGGACTCTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAAAAAGCAGAACAAGTCTTCAATAAGATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCTTGCAATCAGCTTCTGCTACTCTACAAGAGAGTGGACAAGAAGAAGCTTGGTGATGTTCTCACAATGATGGAAAAGGAGAATGTGAAGCCTTCCCTCTTCACTTATAAGCTCCTTGTAGATACCAAGGGTGCTGCTAGAGATATTGAAGATATGGAAAAGGTCATTCAGGCAATGCAAGCGGATGGAATTGAACCAGATCTTCTGTTTCAAGCCACAATTGCAAGGCACTACATATTTGGTGGTTATCGTGAGAAAGCTGAGGCAATTTTGGAGCAAATGGTGGGGGATGATATCAATGAAAACCGTTCTGCTTGCAAATTTGTTTTACCCCTGTACGCTTTTCTTGGCAAAAATGATGATGTTGAAAGGATCTGGAAGGTTTGTGAGGCCAATGCTCGTCTAGATGAGTGCATGTCTGCAATAGAGGCTTTTGGTAAGCTTGGGGATGTTGAAAAGGCTGAGGAGATATTTGACAATATGTTCAAGACATGGAAGACACTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGACAAGGGGAAGGAGCTAGCAAAGCGGATGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGCTTCTTGAGGCATATCTGAATGCAAAGACCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCTTTGCTTGCTGCTACCGATCCATTCAACAGGAAGAACGCAATGTCTAAATTGCTCGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036552