BGIOSGA036554

From RiceWiki
Revision as of 08:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036554| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036554, complete gene.| tag = OS12G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036554

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036554, complete gene.

LocusTag

OS12G0169400

Ensembl Transcript ID

BGIOSGA036554-TA

Ensembl Protein ID

BGIOSGA036554-PA

Length

4565

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3823603..3828167

Sequence Coding Region

3828016..3828167,3827759..3827918),complement(3827059..3827191,3825878..3826048),complement(3825541..3825619
,3825332..3825445),complement(3825183..3825249,3824976..3825081),complement(3824816..3824877
,3824614..3824723),complement(3824408..3824535,3824233..3824315),complement(3823895..3823984
,3823603..3823779

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3823603..3828167 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3823603..3828167 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCACCGCCTCGGCGACGGCGCCGCCGAGCCGCCGGACGCGGAGCCGCCCGCCGTCGGCGTCCTCCCGCAAGTCCGACGACCCCTCCGCCGCCGCCGCCAACGGGAACGGGAAGGCCTCCTCCAAGCCCACCTCCCCCGGCCAGCTGACCGGGGAGAGGACGGTGAGGAAGCTGAGGCTGTCCAAGGCGCTGACGATACCGGAGGGGACGACGGTGTCGGAGGCGTGCAGGAGGATGGCGGCGAGGAGGGTCGACGCCGTGCTGCTCACCGACGCGCAGGGCCTCCTCTCCGGCATCGTCACTGATAAGGATGTAGCTACAAGGGTGGTTGCTGAGGGGCTGCGGGTGGAGCAAACCATCATGTCCAAGATCATGACAAGGAACCCCACATATGCCATGTCTGATACGCTTGCCATTGAAGCATTGCAGAAGATGGTTCAAGGTAAATTTAGACACCTCCCAGTTGTGGAAAATGGTGAGGTTATTGCTATGCTGGACATTGCTAAATGCCTTTACGATGCAATATCAAGACTGGAAAAGGCAGCAGAACAAGGGAGTGCAATAGCAGCTGCTGTAGAAGGGGTAGAGCGTCAATTAGGAGGCAACTTTTCAGCTCCTTATGCTTTCATAGAAACTCTAAGAGAGAGGATGTTCAAACCTTCTTTGTCAAGCATTGTCACGGAGGGCACAAAGGTAGCAATTGTTTCTCCTTCAGACCCAGTGTATGTAGCAACACAGAAAATGCGTGAATTTCGAGTTAATTCGGTGGTTGTTGCTACAGGAAACACACTACAGGGGATCTTCACCTCAAAGGATTTGCTTATGCGTGTTGTTGCACAGAATCTTTCTCCTGAATTGACCCTAGTAGAAAAGGTGATGACTGTAAACCCAGATTTTGCTACATTAGACACGACAATTCTTGATGCTCTACATATAATGCATGATGGAAAGTTCTTGCATATTCCTGTTCTTGATCGAGAAGGACAAATTGCTGCTTGCTTGGATGTCCTGCAACTTACCCACGCAGCCATTCAATTGGTGGTTGAAGGAGGAAATGACACTGTAAATGATGTGGCAAATACAGTAATGCAGAGGTTTTGGGATTCTACTCTTGCTTTGGAGTCTCCAGATGAGGAATGCGATAGCCGTAGTGAAGTATCATTGCTCTTGGCATCAGAAACTGGAGATGGAAAGAGTAGCATTTACCCCCCTGTTATTGGAAATTCGTTTGCCTTTAAGCTTCAAGACCAAAAGGGACGCGTGCATAGATTCACTTGTGGCTCAGAGAGCTTAAACGAGCTAGCGTCTTCTATAAAACAAAGATTAAGTATTACTGACGAAGAGGGCATAATGCAACTCCTGTACGAAGATGATGAAGGTGACCGGGTGCTACTGACAACTGATGCCGATCTTGCTGGTGCCGTGCTCCATGCCAAATCGTCCGGTTTGAAGGTTCTGAAGTTGCATATCGACCTGTCTGAATCCAGCACAGAGGTGACAAAGCCATCACAGCAGCTGGCAGCTGCACGCAGGAGTCGGTTGTCGCCTGTTCGTGTTGGGCTGATGGCTGGTGTGGTCGCTCTCAGCGGTGCAGCAGTGATGGTTTACCTGAAACGAGCTAAAGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MSTASATAPPSRRTRSRPPSASSRKSDDPSAAAANGNGKASSKPTSPGQLTGERTVRKLRLSKALTIPEGTTVSEACRRMAARRVDAVLLTDAQGLLSGIVTDKDVATRVVAEGLRVEQTIMSKIMTRNPTYAMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAIAAAVEGVERQLGGNFSAPYAFIETLRERMFKPSLSSIVTEGTKVAIVSPSDPVYVATQKMREFRVNSVVVATGNTLQGIFTSKDLLMRVVAQNLSPELTLVEKVMTVNPDFATLDTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTHAAIQLVVEGGNDTVNDVANTVMQRFWDSTLALESPDEECDSRSEVSLLLASETGDGKSSIYPPVIGNSFAFKLQDQKGRVHRFTCGSESLNELASSIKQRLSITDEEGIMQLLYEDDEGDRVLLTTDADLAGAVLHAKSSGLKVLKLHIDLSESSTEVTKPSQQLAAARRSRLSPVRVGLMAGVVALSGAAVMVYLKRAKV</aaseq>

Gene Sequence

<dnaseqindica>1..152#250..409#977..1109#2120..2290#2549..2627#2723..2836#2919..2985#3087..3192#3291..3352#3445..3554#3633..3760#3853..3935#4184..4273#4389..4565#ATGAGCACCGCCTCGGCGACGGCGCCGCCGAGCCGCCGGACGCGGAGCCGCCCGCCGTCGGCGTCCTCCCGCAAGTCCGACGACCCCTCCGCCGCCGCCGCCAACGGGAACGGGAAGGCCTCCTCCAAGCCCACCTCCCCCGGCCAGCTGACGTAAGCACACCGAGCCTGCGAACCCTTCCTTCCGTTCCTTCTCTCCTTTGGTTCGTAGCCGCTGAATGATTTTGGGGGTTTCTTCTGTTGGTTGAAGCGGGGAGAGGACGGTGAGGAAGCTGAGGCTGTCCAAGGCGCTGACGATACCGGAGGGGACGACGGTGTCGGAGGCGTGCAGGAGGATGGCGGCGAGGAGGGTCGACGCCGTGCTGCTCACCGACGCGCAGGGCCTCCTCTCCGGCATCGTCACTGATAAGGTACAGGATTTTCTTTGCTTGCCCCCTCCCAATCTGTTGGAAATTTGGAATTTCTAGTGTGCTTTTATAGATGCTGATTTTGGAAGATAGAAGATGGTTTGATTCTTTCAATTTGATGCTATGCGGATGCGACACCTTCTCGTTGCTCTTTTGAAAAACATCGATGCCTGGATTGGATTCTCAGTTTGGAGCATAGCAAGTGGCTTTTTGTGGGTGTCAAAGTTTAAGATATTTTGTTCTCCTTTAGATTTTGGATGTTTTCATCCAAAAAAGTAGGAGTCATTTTTGTTGACCATGTGTTCACTAGTCGCTGCAATTATACATTTATACTTATTGATGCATACTTTTCACTCTGCCTTTTCTTTTTCATTCGGTTTTGGCAAAAAAGGTAGAATTAGTTAAGGTAAAGTGAAGTCGATTTCCACTAAGCCATGGAGTTCAATTTATGCTTTTTACTCTGCTGTGAACCAAAAAGCCAACATGCTTTGCACTTGGTCTAATTTTAGTACTACGATTCGAGATGAAGATGGTTCTTGTTTTCATTCTTTTTCGGGATTCCAATCGCAGGATGTAGCTACAAGGGTGGTTGCTGAGGGGCTGCGGGTGGAGCAAACCATCATGTCCAAGATCATGACAAGGAACCCCACATATGCCATGTCTGATACGCTTGCCATTGAAGCATTGCAGAAGATGGTTCAAGGTATGTCAGACGCACTCCATTTTTTTTACACTTTCTTGGCTAAAACATCTATAGGGACAATGTAACAGTGAAATTGAGCTGGCTAAATTCAATTCCCCTGTCATCTTATAAAATGTTCTTTCATATGATTGAGATTGTAGCAGATTAGCCAGTCATTTCTATTATTATTTTAGCTGTAGTGACTAGTGCCACTTCAAGTCATTTTCGCTATCATGATGCATAATTCTTTCGCCAATGATTCACTAAATTGTAGTACTTAACATAAAGTACTCGGTTAAACAAATTGGGAGCACCTAATTGAGAATCGGCACATGTCAATTTTGTTAGAGCTTTGTGAAACGGGGATAATTCACAGTACTAAATGAAGGTATACTGCACCTAGTAGAGCATTAAAAGAATGGAGTACTTGTTTGCTGTGTATTGCTTGTTCTCCTTTTTTTTTTGTTTTTTGAAAAAGGGTGCAGGAGTTTTGTCCCATTAATTTATAGCAGGGAGAGAACAAAAAAGCAATATCCAGAAATTACATGATGGGTAAGCCCTCGAAAGACTGACAGAGAGAGGAAAACTAAAAAATCCCTGATGTTGGAGGCCAACTTAGTATTCTCTTTGCATGATCATGCTTTCAACTTTCAAGTACTATCTTAGATGAAAAATATGATGTTTTCTTGTTGTATTTTGTTACGCATACTGTTTTTGTATGTCACCATCAGATCAGCTCAATCTGCCCCTTTTTCTGTGTGTGCAATGAAAGGCAAAAGCACATTTTTTGGTAATGTTAGGCATCTTAGCTGTCTTGGAATTTCAATATCTCCAGCAAAAGAAATTGAAGATTCCTTGATTTGTATCGTCAGACGTCTAAGATTTCTTTGGTATGCCCTGAACTTCAGTGGCATATATGTAGGCTGGTTGTTTCACTTTGTTACACATAGACCTTGGTTGGCTAGAAATTTAGTCCCTTTTTCACAAACATACTGACTGTAGTTTCTTTAAAATGTTCATACATATTTTAGGTAAATTTAGACACCTCCCAGTTGTGGAAAATGGTGAGGTTATTGCTATGCTGGACATTGCTAAATGCCTTTACGATGCAATATCAAGACTGGAAAAGGCAGCAGAACAAGGGAGTGCAATAGCAGCTGCTGTAGAAGGGGTAGAGCGTCAATTAGGAGGCAACTTTTCAGGTACTGCACTGGATATTATTATCAATTACTTCACTCTTTCTCACTCTTGAAACTGAAAGTACACCGTGCATAACATGTACTATTTATGGTACATTTTATGGATTATCACTTTTCATGTTGCTATATACATCTTTTAAATAAAATATGTCGAACAACTTATCAGGTATATCATATTCTACTAGACTATTATATGTGTTTGTTTATCATAATTATATTTGGTACTGATCAATTTAAGGTATTCTCTGTTTGTGGATACAGCTCCTTATGCTTTCATAGAAACTCTAAGAGAGAGGATGTTCAAACCTTCTTTGTCAAGCATTGTCACGGAGGGCACAAAGTACAGTAACTGCTTTCTCTTACTATTTTCTGTTAACTTTTAGCAAAAAAGAATGAATAGTGAGTTTTCTCTGACTATTTTCTGTTAATTTTCAGGGTAGCAATTGTTTCTCCTTCAGACCCAGTGTATGTAGCAACACAGAAAATGCGTGAATTTCGAGTTAATTCGGTGGTTGTTGCTACAGGAAACACACTACAGGGGATCTTCACGTGAGCAATCTATTTTAGTACTTCTACTATTATTTACAACTTCCTTATTTTTCTTCTACTTTACTGATGCATCCAAATGCAGCTCAAAGGATTTGCTTATGCGTGTTGTTGCACAGAATCTTTCTCCTGAATTGACCCTAGTAGAAAAGGTTTCTCCACCAGATTTACATTTTCTTGCCTCTTCCGATGCCATCTGAGCTTTGTTTAATTGCATATGAACTCACTGTGTTACTTTCAATTATTTTTGAAGGTGATGACTGTAAACCCAGATTTTGCTACATTAGACACGACAATTCTTGATGCTCTACATATAATGCATGATGGAAAGTTCTTGCATATTCCTGTTCTTGATCGAGGTAGAGCCTTATTCATGTCTCTGCGTCCCAAAAGGACAATAACAAAGCATCTTCTGGGACTTTATTATTTGATGCTTGTCTTACATTTTCCTCAACAGAAGGACAAATTGCTGCTTGCTTGGATGTCCTGCAACTTACCCACGCAGCCATTCAATTGGTGGTCCCTTATCCCAAACTCCTTAATTTCTGATAGTTCTTCCACTCTGCGGTAGATTCCCATGCTAAGCTTCTGAATGCATTCTCAATTTGTAGGTTGAAGGAGGAAATGACACTGTAAATGATGTGGCAAATACAGTAATGCAGAGGTTTTGGGATTCTACTCTTGCTTTGGAGTCTCCAGATGAGGAATGCGATAGCCGTAGGTCTGTTGATGGTTTTCATTTGTTGAATGTTTCGCTCACTTGCTTTCCCCTAATACAATTCTCTTCTACATTTCCCAGTGAAGTATCATTGCTCTTGGCATCAGAAACTGGAGATGGAAAGAGTAGCATTTACCCCCCTGTTATTGGAAATTCGTTTGCCTTTAAGCTTCAAGACCAAAAGGGACGCGTGCATAGATTCACTTGTGGTAATTGCTCTCCTGATAGTTTGCACAAGTATGTTGATTGTTCTCATATCATTCAAACATAACTGTTCTTAACTTCTTTTCTCTTGCTGCAGGCTCAGAGAGCTTAAACGAGCTAGCGTCTTCTATAAAACAAAGATTAAGTATTACTGACGAAGAGGGCATAATGCAACTCCTGGTACAACTGAGTATTTGTCATAAGAATATTTCTAGTGCTTTCATAATCATGTGTAACAAAGAGATGAAATATTCGCTGCCTTAATGTACTCTGCTTCGAGAGTGAAGCTATTGCTATGAGCTTATATGCATGTATTTATGTCCTCTAAACCTGTAATTATTGTCTTTGCACTGCACCACTAAGGCACTTACTAGAGGACAGCCAATATTTCAAGCACTTCCCCACTTAATCTTGTTTGTTCTATGTAGTACGAAGATGATGAAGGTGACCGGGTGCTACTGACAACTGATGCCGATCTTGCTGGTGCCGTGCTCCATGCCAAATCGTCCGGTTTGAAGGTATCTGTTGTTCTTGGACTCTTGGTACTATAGTTTACTCTATGTAGCAACTCGTAGAGCTCTCTAACTTTTCTTGCTTCCATCTATCTCACTACTATGAATATCTCATTGTCAGGTTCTGAAGTTGCATATCGACCTGTCTGAATCCAGCACAGAGGTGACAAAGCCATCACAGCAGCTGGCAGCTGCACGCAGGAGTCGGTTGTCGCCTGTTCGTGTTGGGCTGATGGCTGGTGTGGTCGCTCTCAGCGGTGCAGCAGTGATGGTTTACCTGAAACGAGCTAAAGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036554