BGIOSGA036555

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Revision as of 08:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036555| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036555, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA036555

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036555, complete gene.

LocusTag

OS12G0169100

Ensembl Transcript ID

BGIOSGA036555-TA

Ensembl Protein ID

BGIOSGA036555-PA

Length

4987

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3812636..3817622

Sequence Coding Region

3817506..3817622,3816019..3816346),complement(3813099..3815479,3812636..3812980

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3812636..3817622 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3812636..3817622 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTATGGATCGAACGAGTTGGCTCTGGAGGCGCAAGCCGTCAGACAAGAGCCCCGGAGGCGCCGAGAACACCGTGTCTGTGTCGTCACATTCTGAGCACTACTCTGATGATCAGGAGGTTCTGAGGCCTGTCTCAAACAATGCTTCACCACATCTTGGCCAATCACCTGGAATGCCTTCAAGGGTTAGGGATGATGGGACCCAAGAGACTGGAGTCACAAAACCCTCGAATGAGAAGTTAGCATTGGGATTTAAACTAAATGATTCTTCTCCACGGCATGGTCAATCATCAGAGCCACAGTCATCTTCAAATGTCAGAGATGAAGATGTAAAGGAGAACTTGAAGAGTTTGAATGATAAACTTGCTGCTGCATTTTTGACAATTAATGCTAAAGAGGAATTGGTGAGGCAGCACGCTAAAGTCACAGAAGAGGCTGTTTTGGGTTGGGAACAAGCTGAATCTGAAGTTGCTGCCCTAAAGAAGCTACTTGAAGCTTCAGCCCAGAAGAATGGTTCCCTCGAGGTTCAAGTCAGCCACTTAGCTGAAAAAAATGCTTCTCTCGAGGTTCAAGTCAGCCGCTTAGATGAGGCTCTGAAGGAATGTGTCAGGCAGCTGCACCTAGCACGGGAAGATCAAGCGGAGAAAGTCCATGATGTAGTTACCAAGTCCCAGGAGTTGGAGTCTGAGAACTCAAAGCTCCAAAACCGCATCACTGAACTGAAGAAGCAGCTGGAAACCACGAAACTAGAAGCCTCCAACATGTCTATAGATCATGATCTGCAAGAGAAGTTTCAGGCAATTAAGAAAGAGAACATGGATCTCAAGTCCAAGCTTCTTGTACAGTCCAAGGACCTGAAGATACTATCATTGGAAAGAGACTTGAGCAATCAAGCAGCGGAAACAGCAAGCAAGCAACATTTGGAAAACGTGAAAAAAATTGCAAGGCTTGAGGCAGAATGCCGCAGATTACATCATCTAACTCGCAAAGCAACATTAATTAATGATTCTAGGCCTCTGGCAAACAATACTTGTGTGGAGTCACTTACTGATAGCCAATCTGACAGTGCTGAACGCATGGCTGCTGTTGATAATGAACTGCGGAATTCCGACTCATGGGCATCTGCTCTGGTAGCTGAGTTTGATCAGTTCAAGAATGGAAATGCTGATGAGAAAAATCTTGTGAACAATCCTGTTGTGATTGATCTAATGGATGATTTCCTTGAGATGGAGAGGTTAGCTGCATTGCCTGAATCAGATCGCACAAGCTCTACCTTCGATATGGAAACAGATTCTGATAAAGCTGTGACCAGAAACAGCTCCTCTAAACTTGAAACTGAAGAGTTGAGGAATCAGGTGGCTGATTTGCATGCACAGGTTGAGAAGATTGAAAGTGAGAAAAAGGAGCTTGAGATGGCACTAATGGAGGCAAGAAATCAACTTGACATCTCCTGCAATGCACTAGTGGCAGCAAAGAACAGGCTAGTTGAAATGCAAATGGAGTTGGACTTGGCAAATGACTCCAAGCATGATGCTTTGAGGGATTTTGAGGGATTGAACTCAGAGAAGAAGGCTTTGGAGTTTCAACTGGAGTCTAAATCTGTACGAGTGGAGGAGTTACTTCAGGTGGTGGCTTCATTGGAAGAAAACACAGATAAAAAGGAATTGGAGTCACAATTAGAACTGCTGTCTGCGGAAGCCAAAGAGCTTCGTCTGACTGTAACATCATTAGAAGAGAAGATTGAAGCTGAAAGGTCTCTTTCTGTGCAGCATCAAGCAGAAGCAGTGGCTGCATGTAATGCGAAAGAATCGTTGGAGGAACAGCTATATTCAGCAAACACTGAAGTAGAGAGATTGCATGTCATTGTCAAAGAACTGGAGGATGAGGTAGAAAAAGAGAAGATGAGGCAGGAAGAACTCGTGGCAGAATTAGAAATGAAGATGGAAACAGCTGTCGAGGCTATTAAAGAATCATTGGAGGCACAACTATGTGCAGCAAACACTGAAGTAGAGAGACTGAATGGCATAGTTCAGGCACTAGAGAACGATATAGAAAAAGAGAAGGCGCTGCATAAAGAACTGACAGCACAGTTAGAGGTGAAGTTTGAAGAAGAGAAAGTTCGTTCTGTTCAGACTGTTAAGGAATCAATGGAGGCACAGCTATGCTCATCAAACACCGAAGTACTGAAACTACGTGACATTGTTAAAGCACTAGAAAATGAGGTAGAAAAGGAGAAGGCACTGCATGAAGATCTTTCAGCACAGTTGGAGGCGAAGATCGAAGCAGAGAGAACTTTTTCTGTGGAGGCTATTAAAGAATCATTTCAGTCGGAACTCCAGTCAGTGAACTCAGAAGTTGTGGAGCTGCGCGGTATGGTGACTGCACTTGAGCATGAGGTGGTAAAGGAGAAAACATTTTCTGCAGAGCTCCAAATGCAGCTAGAAGCTCTGGAGGCAATAAAAAGGGTGTTGGAGTCTGAGATTGAGTCTGCACATCAGGATAACAGGAAGCTCAATGATAAGGTGAAGTCTTTTGAAGCAAAACTGAAAAAACAGGTGTCTTCAGCTGCGGACTTCACAGCCAAGGAAGAAGCCATGCAGTCAGAGAGAAGGGCCATGAAGCAACAACTTGAAGCAGCAAAGATGGAAGTTGGAAAGCTGACAAACAAGGTGAGCTTGCTCCAAGGGGAGGTGTTACAGGAGAGATTGTTATCAGAAGAGTTCGAACAAGAATACCACAAGCTGGAGGCTCGGCTGTCAAGGGATAGCCGGGACGCGAAGCTCTGGCGACTCGCAAATTCAAATGGGGGTCTGAAGGCCAAGCAGGAGAAGGAACTTGCAAATGCTGCTGGGAAGCTCGCAGAATGCCAGAAGACCATAGCTTCTCTCGGCCGTCAGTTGAAATCATTGACCGACATCGACAATACGATTGTGGAGCCTGAGAGGCTGGAACCCAGAGAAATCAGAGAAATGCCGCTCGATTTTAGAAATAGTGATGCTGACTTTGCAGTATTTGCAGATGAGTTATATGATTTTGATCTTCCAAAGGTCAACAGCAGCTGCTTTTCGCCGTTACCGTCGATCCAGCCCTCTTCGCCACCTTCAGAAATGTCAGTATTTGCAGGGGGCCTGTCTTCGCTTAGTAGTTTCAGAAGCAAAAGAAGAAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MVMDRTSWLWRRKPSDKSPGGAENTVSVSSHSEHYSDDQEVLRPVSNNASPHLGQSPGMPSRVRDDGTQETGVTKPSNEKLALGFKLNDSSPRHGQSSEPQSSSNVRDEDVKENLKSLNDKLAAAFLTINAKEELVRQHAKVTEEAVLGWEQAESEVAALKKLLEASAQKNGSLEVQVSHLAEKNASLEVQVSRLDEALKECVRQLHLAREDQAEKVHDVVTKSQELESENSKLQNRITELKKQLETTKLEASNMSIDHDLQEKFQAIKKENMDLKSKLLVQSKDLKILSLERDLSNQAAETASKQHLENVKKIARLEAECRRLHHLTRKATLINDSRPLANNTCVESLTDSQSDSAERMAAVDNELRNSDSWASALVAEFDQFKNGNADEKNLVNNPVVIDLMDDFLEMERLAALPESDRTSSTFDMETDSDKAVTRNSSSKLETEELRNQVADLHAQVEKIESEKKELEMALMEARNQLDISCNALVAAKNRLVEMQMELDLANDSKHDALRDFEGLNSEKKALEFQLESKSVRVEELLQVVASLEENTDKKELESQLELLSAEAKELRLTVTSLEEKIEAERSLSVQHQAEAVAACNAKESLEEQLYSANTEVERLHVIVKELEDEVEKEKMRQEELVAELEMKMETAVEAIKESLEAQLCAANTEVERLNGIVQALENDIEKEKALHKELTAQLEVKFEEEKVRSVQTVKESMEAQLCSSNTEVLKLRDIVKALENEVEKEKALHEDLSAQLEAKIEAERTFSVEAIKESFQSELQSVNSEVVELRGMVTALEHEVVKEKTFSAELQMQLEALEAIKRVLESEIESAHQDNRKLNDKVKSFEAKLKKQVSSAADFTAKEEAMQSERRAMKQQLEAAKMEVGKLTNKVSLLQGEVLQERLLSEEFEQEYHKLEARLSRDSRDAKLWRLANSNGGLKAKQEKELANAAGKLAECQKTIASLGRQLKSLTDIDNTIVEPERLEPREIREMPLDFRNSDADFAVFADELYDFDLPKVNSSCFSPLPSIQPSSPPSEMSVFAGGLSSLSSFRSKRRK</aaseq>

Gene Sequence

<dnaseqindica>1..117#1277..1604#2144..4524#4643..4987#ATGGTTATGGATCGAACGAGTTGGCTCTGGAGGCGCAAGCCGTCAGACAAGAGCCCCGGAGGCGCCGAGAACACCGTGTCTGTGTCGTCACATTCTGAGCACTACTCTGATGATCAGGTTCTATCCCATGTCTGATGACTTTGTTTTGTATAACTAGAGTTCTTTCTACCTCAATAGGACAGTTTAGTTGCTATGTTCTTTTCGGACCTACGTCGCGGTTGTTACATTCTTTAGTCGTAGCCATTCTCTTTCTAGCTGTTATAAACAAATCTCCTTTTTAGCTTTTAAGAAAATGAGAGGCAGGATAAATTACTTGCTTTTTTTATCTGAATGAGAATGGAATTTGAATCCAGGACTACAACAATGTGATAACTGTACTATCGACCTATTGTTTTCAGAGATAGCGAAGTTTGTCTTAGAAAAGAAGTCTGAAACTTTACATTATAAGTGTTACAGAAATGTCACTTTAGGATTGTACAGGCAAGATGTCATTTTCACTTCCTTGGGCAGATATATATCGCAGACAAACTTATAGTTTGGCCTGATTCTAATGGAGCATAGTGGTTCAGATGATAATGTCTGATGAATGCATTGATATTGACTTGATGTATTATGGTACTAGAGATTGAGCAGCATGTTGCTACCTAGTACCTACCGAGTACCGACTATCGTGCTCATAACAGTAGCTCAAACCGTATAAAATCTGTCATGTTGAGGTTGAGTATGAAGCTGAATCTCGACTTCTATTAATGAAAATGTTGTAGCGATGTGCCGATGTTTCATAATATTTGTAATGCCCTTTTCCGTGCAAGCAAAGAAAAAGCTTTGAACAGACAAAATGATGCTGGTAGTATTTAAGGGAGTTAAGTACCCTGTTCAGTTAACTCCAAGAGAGTTCTTCTAATTATGAGAAAATTCATTCCTTAAAATTTATTCTGAATAGTATCTGCCAACTAAAGACAATTAAATTCAATTCGCCCAATCTCCTATAAGATGCTCTTGAAATCTATGCATATTTTTCAAGGTTCTAACTAGTAAGTTCTGCAACAGTCTATATTGATGTACCTTTTTGTCAACCTGTTTGTGTTTTCTTGTATGAAGGTAAATGAGCTGCCTAATAGCACTAAATATGGACATAAATAGTTAATACTTGTAATATAATTTATACATATATGGCATCTTTTGCTAAATCTGGATGCTGTTTTATTTCTTTTTCTGAATGATAATAAATGATTTATCCTGAGTGTTCGAATTTTGTTTGCTCATGTTAAACCAGGAGGTTCTGAGGCCTGTCTCAAACAATGCTTCACCACATCTTGGCCAATCACCTGGAATGCCTTCAAGGGTTAGGGATGATGGGACCCAAGAGACTGGAGTCACAAAACCCTCGAATGAGAAGTTAGCATTGGGATTTAAACTAAATGATTCTTCTCCACGGCATGGTCAATCATCAGAGCCACAGTCATCTTCAAATGTCAGAGATGAAGATGTAAAGGAGAACTTGAAGAGTTTGAATGATAAACTTGCTGCTGCATTTTTGACAATTAATGCTAAAGAGGAATTGGTGAGGCAGCACGCTAAAGTCACAGAAGAGGCTGTTTTGGGTAAATATATCCTTTCTATAACATCTTTTTTTTTTTTTGGAGAAAGGGAGGTAGGCCTTCCCCATTTCTATTACCAGAAATGGCTGAAAAGACATGTAGTTCTTACAGCAAACAAAATAAAACATAGATAGGAGCTTCAGCATGCCTTTTAGCCTGATGCCGTCCTGTTGGGTGCACACCGATGGCTGGATAGTCTGCTGCTTTGAGATCTGACAATGACTAGAAAGAAAAGATAAAGCTATAATAGTTTCTAGAAAAGCAACTTGAAAGCATCACTTCCTGTGTGGCTGTGCTACACAAAATCCTTTCTATAATTTACGCATATTAACTAAATGATTCCTCCATGTTAGTTATTTTGTAGGTAAACTTTAGAAACTGTGCACTTAATTGATCCACACTTCCATTCATTAATCTGCAAAGTTACTTCTGAGTACTGAATTGCGTTTGTAAAAATTGTTGTAAGAGATCAAATTGATTTAGGTAATTTTATTTGTCTTTGTTGCAGATTACTAATCTTGTCATTGATATACATTTTTTAGGTTGGGAACAAGCTGAATCTGAAGTTGCTGCCCTAAAGAAGCTACTTGAAGCTTCAGCCCAGAAGAATGGTTCCCTCGAGGTTCAAGTCAGCCACTTAGCTGAAAAAAATGCTTCTCTCGAGGTTCAAGTCAGCCGCTTAGATGAGGCTCTGAAGGAATGTGTCAGGCAGCTGCACCTAGCACGGGAAGATCAAGCGGAGAAAGTCCATGATGTAGTTACCAAGTCCCAGGAGTTGGAGTCTGAGAACTCAAAGCTCCAAAACCGCATCACTGAACTGAAGAAGCAGCTGGAAACCACGAAACTAGAAGCCTCCAACATGTCTATAGATCATGATCTGCAAGAGAAGTTTCAGGCAATTAAGAAAGAGAACATGGATCTCAAGTCCAAGCTTCTTGTACAGTCCAAGGACCTGAAGATACTATCATTGGAAAGAGACTTGAGCAATCAAGCAGCGGAAACAGCAAGCAAGCAACATTTGGAAAACGTGAAAAAAATTGCAAGGCTTGAGGCAGAATGCCGCAGATTACATCATCTAACTCGCAAAGCAACATTAATTAATGATTCTAGGCCTCTGGCAAACAATACTTGTGTGGAGTCACTTACTGATAGCCAATCTGACAGTGCTGAACGCATGGCTGCTGTTGATAATGAACTGCGGAATTCCGACTCATGGGCATCTGCTCTGGTAGCTGAGTTTGATCAGTTCAAGAATGGAAATGCTGATGAGAAAAATCTTGTGAACAATCCTGTTGTGATTGATCTAATGGATGATTTCCTTGAGATGGAGAGGTTAGCTGCATTGCCTGAATCAGATCGCACAAGCTCTACCTTCGATATGGAAACAGATTCTGATAAAGCTGTGACCAGAAACAGCTCCTCTAAACTTGAAACTGAAGAGTTGAGGAATCAGGTGGCTGATTTGCATGCACAGGTTGAGAAGATTGAAAGTGAGAAAAAGGAGCTTGAGATGGCACTAATGGAGGCAAGAAATCAACTTGACATCTCCTGCAATGCACTAGTGGCAGCAAAGAACAGGCTAGTTGAAATGCAAATGGAGTTGGACTTGGCAAATGACTCCAAGCATGATGCTTTGAGGGATTTTGAGGGATTGAACTCAGAGAAGAAGGCTTTGGAGTTTCAACTGGAGTCTAAATCTGTACGAGTGGAGGAGTTACTTCAGGTGGTGGCTTCATTGGAAGAAAACACAGATAAAAAGGAATTGGAGTCACAATTAGAACTGCTGTCTGCGGAAGCCAAAGAGCTTCGTCTGACTGTAACATCATTAGAAGAGAAGATTGAAGCTGAAAGGTCTCTTTCTGTGCAGCATCAAGCAGAAGCAGTGGCTGCATGTAATGCGAAAGAATCGTTGGAGGAACAGCTATATTCAGCAAACACTGAAGTAGAGAGATTGCATGTCATTGTCAAAGAACTGGAGGATGAGGTAGAAAAAGAGAAGATGAGGCAGGAAGAACTCGTGGCAGAATTAGAAATGAAGATGGAAACAGCTGTCGAGGCTATTAAAGAATCATTGGAGGCACAACTATGTGCAGCAAACACTGAAGTAGAGAGACTGAATGGCATAGTTCAGGCACTAGAGAACGATATAGAAAAAGAGAAGGCGCTGCATAAAGAACTGACAGCACAGTTAGAGGTGAAGTTTGAAGAAGAGAAAGTTCGTTCTGTTCAGACTGTTAAGGAATCAATGGAGGCACAGCTATGCTCATCAAACACCGAAGTACTGAAACTACGTGACATTGTTAAAGCACTAGAAAATGAGGTAGAAAAGGAGAAGGCACTGCATGAAGATCTTTCAGCACAGTTGGAGGCGAAGATCGAAGCAGAGAGAACTTTTTCTGTGGAGGCTATTAAAGAATCATTTCAGTCGGAACTCCAGTCAGTGAACTCAGAAGTTGTGGAGCTGCGCGGTATGGTGACTGCACTTGAGCATGAGGTGGTAAAGGAGAAAACATTTTCTGCAGAGCTCCAAATGCAGCTAGAAGCTCTGGAGGCAATAAAAAGGGTGTTGGAGTCTGAGATTGAGTCTGCACATCAGGATAACAGGAAGCTCAATGATAAGGTGAAGTCTTTTGAAGCAAAACTGAAAAAACAGGTGTCTTCAGCTGCGGACTTCACAGCCAAGGAAGAAGCCATGCAGTCAGAGAGAAGGGCCATGAAGCAACAACTTGAAGCAGCAAAGATGGAAGTTGGAAAGCTGACAAACAAGGTGAGCTTGCTCCAAGGGGAGGTGTTACAGGAGAGATTGTTATCAGAAGAGTTCGAACAAGAATACCACAAGCTGGAGGCTCGGCTGTCAAGGGATAGCCGGGACGCGAAGCTCTGGCGACTCGCAAATTCAAATGGGGGTCTGAAGGCCAAGCAGGTAGATATATATACTGAAGTCTTGTAATTTACATTACACCATTTACCCTTGGCTTAACACACTCGCCTGGTATTTATCAAGAAATGGATCCAACTATAAATCGTTGTGTTTGTCACAGGAGAAGGAACTTGCAAATGCTGCTGGGAAGCTCGCAGAATGCCAGAAGACCATAGCTTCTCTCGGCCGTCAGTTGAAATCATTGACCGACATCGACAATACGATTGTGGAGCCTGAGAGGCTGGAACCCAGAGAAATCAGAGAAATGCCGCTCGATTTTAGAAATAGTGATGCTGACTTTGCAGTATTTGCAGATGAGTTATATGATTTTGATCTTCCAAAGGTCAACAGCAGCTGCTTTTCGCCGTTACCGTCGATCCAGCCCTCTTCGCCACCTTCAGAAATGTCAGTATTTGCAGGGGGCCTGTCTTCGCTTAGTAGTTTCAGAAGCAAAAGAAGAAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036555