Os12g0178300

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0178300| Description = Protein of unknown function DUF248, methyltransferase putative family protein| Version = NM_001189888.1 GI:297728906 ...")
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Gene Name

Os12g0178300

Description

Protein of unknown function DUF248, methyltransferase putative family protein

Version

NM_001189888.1 GI:297728906 GeneID:9271134

Length

4568 bp

Definition

Oryza sativa Japonica Group Os12g0178300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3965772..3970339

Sequence Coding Region

3969384..3969754,3969927..3970155

Expression

GEO Profiles:Os12g0178300

Genome Context

<gbrowseImage1> name=NC_008405:3965772..3970339 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3965772..3970339 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgttatactctacattattaaattttttagaatgttctacaactatttacattgaatttaaaagaaaaaagataaataacgggacatcccctcaacggtttaaaatccactcccatccaaacaccctgcatcgcatcgcatcaatgacattgtcatcttcttcctcgatcaggttcgcggcggcattgaaggacatgaatgtgtgggtgatgaacgtggtgccagtggactcggcggacacgctgccgatcatctatgagcgagggctgtttggcatgtaccacgactggtgcgagtccttcagcacctaccctcgatcatacgacctcctccacgccgaccatctcttctccaagctcaagaaaaggtgcaagctgttgccggtgatggtcgaggtggaccggatcctgcggccggaggggaagctgatcgtgcgggacggccgcgacacggcggcggaggtggagagcatcctgaggtcgttgcactgggaggtgaggatgacggtgtccaagcagggagaggtgatgctctgcgccgagaagacgatgtggcggcccaaggaagtcgagaaggcggcgacgacggcgagctag</cdnaseq>

Protein Sequence

<aaseq>MLLYSTLLNFLECSTTIYIEFKRKKINNGTSPQRFKIHSHPNTL HRIASMTLSSSSSIRFAAALKDMNVWVMNVVPVDSADTLPIIYERGLFGMYHDWCESF STYPRSYDLLHADHLFSKLKKRCKLLPVMVEVDRILRPEGKLIVRDGRDTAAEVESIL RSLHWEVRMTVSKQGEVMLCAEKTMWRPKEVEKAATTAS</aaseq>

Gene Sequence

<dnaseqindica>3613..3983#4156..4384#gcattttgaatttctctctctcttcatctgcctcactttctctctctacttcacttcttcttcttcttctcttctcccaagcaaagcaacagctcgagatcgatctagtactgtggctgctagctgcatatataagtaatggtgcatatttgatctcgctttcgcaaccgttcgattggtttgaggatcaattgatttggagatttttttgagtgtgttcaattcatcactcatcaggtcagtttcaatccaggatgttgttttgttgtactgtttcttggttgctaattatgctaggatgttcgtttcatttgtgcttaattttgttgaattttggcgcatgtttaactaatagatcaccttcttttgtataatgtaggtagtaataacccaaacaatctgatctgtaaacaggaattccattattgtttcttgtcattagcatttgcaacatttcagacagtgtctctgtccacataacataaacaaataaactgtctaaataagatactcagacagtttcttactggagtaataatatgctatattgatcagtgtgattagattgttactgatgtggaatttggatttcaaatcccagatcaatttacacataatttgttcactccaaaataagaggctaataagcctttcctgtgtgaatgtgcagagagtgtgaagtgcctactgcatgagctagctgtgagcctgtcacaagatgccgttgtttgatcgggatcggtaccagcggctggatggcaacggcggcggcggcggcggaggacgccgttcttcgccgtcgtcctgctcgacggcgaccatcgtcctgttcgtggcgctctgcctcgtcggcgcgtggatgatgtcgtcgacgggaaacgtcccgatggccgtgtcgccggaggacaagccgccggcggtggtcaaggaggacgacgcgtcgtccatcgacgtcaccgacggcgtcaagggtcgcggcggcggcggcgatggcggcgacacgccgcgaactacggacgaggcagccgacgacgttggcaagaaagtccaagatgccggcgacacggcgaagacgacggacgacgtcggggacaccggcgtgaaaggcggcggcgttgacacgcaaacggcgacggatgcggtcgccaagaccaccaccggaggcacgggggcgggggagtccggcaagcccgccggcgacaaggtaggcgacggcgagacgacgacgacgtcgaagaaccagacattctccgacgagaacggcaagacggagggcggcgaggtggtgagcccagaagatcccgacaagcagagcgccgacgatgcgccaaccgacggcaaggacaccggcgaccaagccagcggcgatgccgacgaggcgccgtcgacggacacgaaggggaaaaagaacagcacggcggaggagcccagggacaccaaggacgccggcgagaacgccgatgaggcttccaccgagactaaggctgacaagagctccgacgatacgcccaccgacgcgaaggcgaccggcgacggcggcacgccgtcgaagaaccagacgtcattcgacgacgagaacgggaagatggacggcgtcgagacggtggcagaggacggcaaggtcacggagaagagctccgaacaagttcccaccaatggcgacgacggcggcggcggcggcgaggcgcaaaccaccgacgacgacacggccaccggcgcgtcatcgaacaaccaaactatcagcgacatgaacgacgactcgaacacgacgacgacgacgacgacgacactcgcagccgtggacagcagcaatggcacagtctcccaaacaacagaggacgacgcgccggcgaacagcgccgccgccgccgccgccgccaccgaaaagatcaatccggcggcggagcaggagctcctcccgagcggccaggctgagctgctgaacgagacggcgtcggcggtggcgcagaacggctcgttcccgacgcaggcgtcggagtcgagcgccgagaagaaggcgcgcgacagaaacaagaacaagagcaacggcagcgacacggcggcggcggcggcggtggcggtggcgcacgggtggaagctctgcaacgtgagcaccggcgaggactacatcccgtgcctggacaacgaggcggcgatcaagaagctcaagacgaccaagcactacgagcaccgtgagcgacactgccccgccgcggcgccgacgtgcctcgtcccgctccccggcggctaccggcggccgatcccgtggccgtacagccgcgacaagatctggtaccacaacgtgccgcacaccaagctggcgtcgtacaaggggcaccagaactgggtgaaggtctccggcgagcacctgacgttccccggcggcgggacgcagttcataaacggcgcggcgcactacatcgacctgatcgaggaggcggtcccggcggtggcgtgggggcggcgcagccgcgtcgtgctcgacgtcggctgcggcgtggccagcttcggcggcttcctgttcgaccgcgacgcgctcaccatgtcgctggcgccccaaggacgagcacgaggcgcaggtgcagttcgcgctggagcgcggcatccccggccatctccgccgtcatgggcaccaagcgcctccccttccccggcggcgcctacgacgccgtccactgcgcgcgctgccgcgtgccatggcacatctggggcggcaagctcctcctcgaggtcaaccgcctcctccgccccggcggcctcttcgtctggtccgccacgccggtctaccggaagacgccggaggacgtccagatctggcacggtgagctcccctcccccattaattcttctcatctcatatgcctcgctcttactcctcgccgcgccgcgctgcgccgcacgcagacatggcggcgctcaccaagtccatgtgctggaagatggtgaagaagacgaacgacaccgtggacgagacggccatggtgatcttcaagaagccgacgagcaacggctgctacagcaaccgggagaagccggagccgccgctctgcgacgccgacgacgaccccaacgccgcgtggaacatcacgctgcgggcgtgcatgcaccgcctgcccaccaacaagtccgtccgcggcgcgcggtggccggagctgtggccggagcggatgtcggcggcgccctactggctgtcgcacagccaggtcggcgtctacggcaagccggcgccagacgacttcgcggcggacgaggagcactggaaccacgtcgtcaacagctcgtacctcgccggcgtcggcatcgactggagcaacgtcaggaacgtcatggacatgcgagccgtgtatggcgggtacgacaccactacacgattggaaactattttgatgcctcgagtttgtttaaaaaaacattccaacgattataaaaaaaatcttaaagaattttaataacactcatacaacatatcacttcacaaaattttaaatccaaactcagccgaaacattgagatattaaaaaactaaatttaacatatgaatagtattgtactgttcacatccgaattttttatttgtgggttgcatttaacttgatttttaagtactgatagatgttgttatactctacattattaaattttttagaatgttctacaactatttacattgaatttaaaagaaaaaagataaataacgggacatcccctcaacggtttaaaatccactcccatccaaacaccctgcatcgcatcgcatcaatgacattgtcatcttcttcctcgatcaggttcgcggcggcattgaaggacatgaatgtgtgggtgatgaacgtggtgccagtggactcggcggacacgctgccgatcatctatgagcgagggctgtttggcatgtaccacgactggtgcgagtccttcagcacctaccctcgatcatacgacctcctccacgccgaccatctcttctccaagctcaagaaaaggtcactacatactactccttacattccacattataattcgctttgacttttttggccaaaaaagtcaaagcgaattataatgtggaacggagggagtacattctttcgtcatttcccccattcagagctgagctagccatccatggtgtctcttctctatcaccttgtgcaggtgcaagctgttgccggtgatggtcgaggtggaccggatcctgcggccggaggggaagctgatcgtgcgggacggccgcgacacggcggcggaggtggagagcatcctgaggtcgttgcactgggaggtgaggatgacggtgtccaagcagggagaggtgatgctctgcgccgagaagacgatgtggcggcccaaggaagtcgagaaggcggcgacgacggcgagctagtagggaagaagttgatgatcatggctagtagtgcttagcaccagaaaaagagttttggcaaatattgtggcacgttgtaataaaaaaatgatggtagatttgagtagaaattagacatgtcataattgagttttgtatacaagttttacaaaagagagatggttaattcagtaggtttgtgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0178300, RefSeq:Os12g0178300