BGIOSGA036579

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Revision as of 08:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036579| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036579, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA036579

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036579, complete gene.

LocusTag

OS12G0162900

Ensembl Transcript ID

BGIOSGA036579-TA

Ensembl Protein ID

BGIOSGA036579-PA

Length

4415

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3472310..3476724

Sequence Coding Region

3476625..3476724,3476301..3476612),complement(3473851..3475474,3472310..3473288

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3472310..3476724 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3472310..3476724 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCAGCTCGTGCTCCTCCGCCGCATCCCCGTCCGCCGCCACTGCGGCCCCAGCAGCAGCCGCCTCCTCAGCTCGGCCGCCGCCGGGGCAGGCGGCGTGGGGCGGCGGGGACCCTACCAGCAGCAGCAGCAGGAGGAGGAGGAGAGCAAGGCGGTGAAGGTGTCCGTGTGGTGGGACTTCGAGAACTGCAACCTCCCCAACGGCGTCAACCCCGGCCGCGTCGCCCCGCGCGTCACCGCCGCGCTCCGCGCCGCCGGCATCCGCGGCCCGCTCTCCATCACCGCCTTCGGGGACGTCGTCCAGCTCGCCCGGCCGTCCCAGGAGGACCTCGTCGCCACCGGCGTCTCCATCTCCCACGTCCCCAACAGTTGCGTCCGCTCTCCTTTCCCCACTTCGATCCCCCCCTGCGGTGGAAAGAATAGTTCTGATCGGTCATTTATGGCTGATCTTGTCTATTGGATCGCACAGAATCCCCCACCAGCCCATTTTTTCCTTATATCTGGGGATAAAGACTTTGCAAACATTTTGCATCGCCTGCGAATGAGCAACTATAACATACTGCTTGCTTCTCCTGGTACTGCTACCACCAGTGTACTCTGTAGTGCAGCAACAATCATGTGGCCCTGGGAAGCTCTAGTGAAAGGGGAGGATTTCTCACCTAAACGTTTTAACCACCCACCTGATGGTTTAGCTGGTTCTTGGTATGGTCACTATAAAGGAGCCCTGGATGATCCCTTTGTAGACACAGAACCCGAGGAACTCGTTGTAGTACCATCTGATCTCAAGCATGGTTCAATCCCCAAATATGTGGTTAATGCGATCCAGCAGGTACTAAAATCATATCCTAATGGAGTGAATCTGTCAGACCTCCGACTAGAGCTTAAAAAGAAAAATATTTATCTGGGAAATGATTTTTTTGGCCACAAGAAGTTCTCTTGCCTTCTCCAATCGCTGCCAAATTTTGTGGAATTTATTAGTCCTCCAGTTGGTGCAAACCAGCCATGTGTAGTTGCAGCCAACAGAAAATTGATGGGTCCTGACAAACAAAATTTTGAGAGTTCAACTGAAAGTAATGTCGGGGACAATAACTTGAATCGAGCAATACACAATGACAAGCCACCTCCACTCCCTGTGTCGACTTCTTTTTCTGAAAAGAATGCTAAGACCGAAAATTCTTCTCAAAATATTGCCAAGAAGCTGCAGACTGCAAGCGAGAATCCACCTACATTTGCTGTCTTATCTTCCCGATCAGATGTGTTACCTGAGGATCAAAAGGAGCACCCAGCTGCCAACTTGAATGCACAGATAGAATCACCAGAGGACCACAAGGAAGTTGATCCTACGACTGCCTCTGGAATTCCCTCTTCCTTAGGGGTGGAAGACAATGTTAACAAGGAAGGGCTATTCAAAAGGATCTGGCTATTGTGGAAAGGCCCTGAGAGTGCCAAGTCTGAAGTTTCCCATCTTGAAAGTACTTCCACTGTAGTGGTTGGTGATGCCCAATCTCCTCAGCAAGAACATAATGCTAATGAGCATCGGAGACTTTTGAAGAGAGTCTATAAAAAATCTTGTCGAAATGGCAGCACAGACGGATCTGACAGTGTGACAACAGGCAGTGCATCAACTTCATCTCATGATGACCGCTCTAAAAAGTTAAAGCATGTGGATGATATGAGATCATTAGAAAGGGATACATCAAATTCAGAACCATGTGATAGTTCTGTATCTGTTTCTGTGGACAAAGCTGAGAAAGGAGATGGTATTTCCAAAATGGATAAGGGTTTATTTAGCTGGGTAACAGGGTGGTTGAAATTTGGAAAATCAGATGCAGATAATGTTACAGCCAATAGAAATGTGATTGATGAAGCAAGCACTGACTCACTAAAAGGACCTGAATCCTTGAAGGTTTCAGCTTGTGGAAGTGGAGAAGAGGAGGTTCATGAAATATTCACAAAATCTTTCTTCTGGGATGTTTTGCAGCAACAGCTATCAAAGCCCCTTGGTTCTGAGCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGTGCATCAATTGCACAAATTAGATTGTTGGCCTCTGAAAGGCCTAGCTGAGAAAGATCTCCATCAGCTGGTGAATATTTTAGTTTCAGAGAAGAAATGGGTTGAAGAAACCCCTTCCAGGTATTTTCCGTTTCGTCTTACCCTTCCTCACAAGAGAACATGCATTCCATCGAACTCCAGGAAGTTTGATGGTCTCAGTTCTCTGTTTTCCAATGGGAAGCCATTGCCGGGCAAATACACTGGTGATCAAAGCACAAACAGTCCTCTCCCTAGGGAGGAAACTTTGTCGGACTGTCACAAGCTGTTAAAGGACCTTCTTCTGGAATATGAATATGGTTTTAACATCAGCATTTTCAAGCTTCGTTTTGCTCAGAAGCATGGATATGAGCTAGACCCTCAAAAGCTTGGATATCCAGACCTTAAGTCCCTGTTGCAGATTATGCCTGGTGTGAGAGTAAAATTTCCAAGGGTTCTACCTGCAGAAAACGGAAATGGCCAAGCTGGCAGCAAGGGCAATGGAAATCAAAGTAATGGCGATGACTTTGTTTGGGAGGAACTTGGTCCTGTATCTGCTACCACTGAAACTGTGCAAACTGTTGACAAAGAAATGTGCTACCGTCCTCCTACTCTTTCAGATGATGATTTTTCAGAGGATGAGAACCATGCAGACCAGCAGCCTAGAAAAGAGGCTGAAGCAAGCTCGCTCCTCCAAATTATTGATTCCTGGCACAATAGTAAGGATGTCTCTAGCAAAAAAACTCAAGACATTGATGGGCTTGTTGATTGTTCAAGGAGTGACCATGGCTATCTTGACAATCTGACCGGAGGAAATGCACCGAAGCCTACAAGGCCACAGCATAAACAGTACTCTTTCGTGTCAGACTCGGAAGAAGATACAGAGAAGGGTAAGCTAGTTGAGAGCGTCTTGGGCAGCTTGCAAAAAGCACGGACCTCAAAGTTGCACAACTGA</cdnaseq>

Protein Sequence

<aaseq>MSQLVLLRRIPVRRHCGPSSSRLLSSAAAGAGGVGRRGPYQQQQQEEEESKAVKVSVWWDFENCNLPNGVNPGRVAPRVTAALRAAGIRGPLSITAFGDVVQLARPSQEDLVATGVSISHVPNSCVRSPFPTSIPPCGGKNSSDRSFMADLVYWIAQNPPPAHFFLISGDKDFANILHRLRMSNYNILLASPGTATTSVLCSAATIMWPWEALVKGEDFSPKRFNHPPDGLAGSWYGHYKGALDDPFVDTEPEELVVVPSDLKHGSIPKYVVNAIQQVLKSYPNGVNLSDLRLELKKKNIYLGNDFFGHKKFSCLLQSLPNFVEFISPPVGANQPCVVAANRKLMGPDKQNFESSTESNVGDNNLNRAIHNDKPPPLPVSTSFSEKNAKTENSSQNIAKKLQTASENPPTFAVLSSRSDVLPEDQKEHPAANLNAQIESPEDHKEVDPTTASGIPSSLGVEDNVNKEGLFKRIWLLWKGPESAKSEVSHLESTSTVVVGDAQSPQQEHNANEHRRLLKRVYKKSCRNGSTDGSDSVTTGSASTSSHDDRSKKLKHVDDMRSLERDTSNSEPCDSSVSVSVDKAEKGDGISKMDKGLFSWVTGWLKFGKSDADNVTANRNVIDEASTDSLKGPESLKVSACGSGEEEVHEIFTKSFFWDVLQQQLSKPLGSELVSKAKTREELVHQLHKLDCWPLKGLAEKDLHQLVNILVSEKKWVEETPSRYFPFRLTLPHKRTCIPSNSRKFDGLSSLFSNGKPLPGKYTGDQSTNSPLPREETLSDCHKLLKDLLLEYEYGFNISIFKLRFAQKHGYELDPQKLGYPDLKSLLQIMPGVRVKFPRVLPAENGNGQAGSKGNGNQSNGDDFVWEELGPVSATTETVQTVDKEMCYRPPTLSDDDFSEDENHADQQPRKEAEASSLLQIIDSWHNSKDVSSKKTQDIDGLVDCSRSDHGYLDNLTGGNAPKPTRPQHKQYSFVSDSEEDTEKGKLVESVLGSLQKARTSKLHN</aaseq>

Gene Sequence

<dnaseqindica>1..100#113..424#1251..2874#3437..4415#ATGTCCCAGCTCGTGCTCCTCCGCCGCATCCCCGTCCGCCGCCACTGCGGCCCCAGCAGCAGCCGCCTCCTCAGCTCGGCCGCCGCCGGGGCAGGCGGCGGCGCCGGCGGCGTGGGGCGGCGGGGACCCTACCAGCAGCAGCAGCAGGAGGAGGAGGAGAGCAAGGCGGTGAAGGTGTCCGTGTGGTGGGACTTCGAGAACTGCAACCTCCCCAACGGCGTCAACCCCGGCCGCGTCGCCCCGCGCGTCACCGCCGCGCTCCGCGCCGCCGGCATCCGCGGCCCGCTCTCCATCACCGCCTTCGGGGACGTCGTCCAGCTCGCCCGGCCGTCCCAGGAGGACCTCGTCGCCACCGGCGTCTCCATCTCCCACGTCCCCAACAGTTGCGTCCGCTCTCCTTTCCCCACTTCGATCCCCCCCTGCGGTTCTGATTTTTGACACGTATCCTCTTTGAGTTGTTCTTCGTCTCTAGAGATGTAATCATGAATTAGGAAATGGTATTGTCGCCTTTGCTACGAGTGATGCGCCCTAGTGCGTATTTCTCTGGATTATGCGTTGCTGGAGGAGTGATTGATATGAGTTGCCATATTATTAGAGGGTTAATGAGCAATTGATCATTCCTTTTTGTGTAGAAATGGATCATGGGTAGCTCATAGGGATGAATGATGCGGAGTACAAGAGCTATGCTCTCCTTCTGTTTAGCCTTACAAAGGCTACACATTTTTTTTTGTCATGGGCTCAGATTTGTCGGCTAATTTTTCTAGTGAAGCACAAAATAAAATAAATCTATTTGGTTAATGTTTACTTGATTTTGGTGTCAATTAGCTTCAAATTGCTAGATGATCAGGACCATTTCATTTTCATCATGGATCTTGGGGAAAAAGATCTCTATGAATATTTTCTTTTTTAATTCCTGATGTAGTTAAGTTATGTGGTTCTTGTTGTTTTTGATGGGTAAATTATTAGGTAGTGCCCGAGCAGTGTTGTCGAGTTTAATACACTTTCGGTGACTCCAATATCAGGTGGTTAGTTGGACGGTCTCACTGCCGTAGATGACAGTTGAATGTGCTTGGATGTTTGTTCCTAAAAATGGTGAAGTAGCAGCATTAGCGCTTCTCATTAGCACTACTTATGTTAACAGTGAAAGCTTAGCATTCTGTCACCTCCATTATTTTTTTCGTGCATTCATTTTCTTATGATGTATTTCGGTTTCTTCTTGTTCTGCTAATAATGCTATTGCTGTGATGTAGGTGGAAAGAATAGTTCTGATCGGTCATTTATGGCTGATCTTGTCTATTGGATCGCACAGAATCCCCCACCAGCCCATTTTTTCCTTATATCTGGGGATAAAGACTTTGCAAACATTTTGCATCGCCTGCGAATGAGCAACTATAACATACTGCTTGCTTCTCCTGGTACTGCTACCACCAGTGTACTCTGTAGTGCAGCAACAATCATGTGGCCCTGGGAAGCTCTAGTGAAAGGGGAGGATTTCTCACCTAAACGTTTTAACCACCCACCTGATGGTTTAGCTGGTTCTTGGTATGGTCACTATAAAGGAGCCCTGGATGATCCCTTTGTAGACACAGAACCCGAGGAACTCGTTGTAGTACCATCTGATCTCAAGCATGGTTCAATCCCCAAATATGTGGTTAATGCGATCCAGCAGGTACTAAAATCATATCCTAATGGAGTGAATCTGTCAGACCTCCGACTAGAGCTTAAAAAGAAAAATATTTATCTGGGAAATGATTTTTTTGGCCACAAGAAGTTCTCTTGCCTTCTCCAATCGCTGCCAAATTTTGTGGAATTTATTAGTCCTCCAGTTGGTGCAAACCAGCCATGTGTAGTTGCAGCCAACAGAAAATTGATGGGTCCTGACAAACAAAATTTTGAGAGTTCAACTGAAAGTAATGTCGGGGACAATAACTTGAATCGAGCAATACACAATGACAAGCCACCTCCACTCCCTGTGTCGACTTCTTTTTCTGAAAAGAATGCTAAGACCGAAAATTCTTCTCAAAATATTGCCAAGAAGCTGCAGACTGCAAGCGAGAATCCACCTACATTTGCTGTCTTATCTTCCCGATCAGATGTGTTACCTGAGGATCAAAAGGAGCACCCAGCTGCCAACTTGAATGCACAGATAGAATCACCAGAGGACCACAAGGAAGTTGATCCTACGACTGCCTCTGGAATTCCCTCTTCCTTAGGGGTGGAAGACAATGTTAACAAGGAAGGGCTATTCAAAAGGATCTGGCTATTGTGGAAAGGCCCTGAGAGTGCCAAGTCTGAAGTTTCCCATCTTGAAAGTACTTCCACTGTAGTGGTTGGTGATGCCCAATCTCCTCAGCAAGAACATAATGCTAATGAGCATCGGAGACTTTTGAAGAGAGTCTATAAAAAATCTTGTCGAAATGGCAGCACAGACGGATCTGACAGTGTGACAACAGGCAGTGCATCAACTTCATCTCATGATGACCGCTCTAAAAAGTTAAAGCATGTGGATGATATGAGATCATTAGAAAGGGATACATCAAATTCAGAACCATGTGATAGTTCTGTATCTGTTTCTGTGGACAAAGCTGAGAAAGGAGATGGTATTTCCAAAATGGATAAGGGTTTATTTAGCTGGGTAACAGGGTGGTTGAAATTTGGAAAATCAGATGCAGATAATGTTACAGCCAATAGAAATGTGATTGATGAAGCAAGCACTGACTCACTAAAAGGACCTGAATCCTTGAAGGTTTCAGCTTGTGGAAGTGGAGAAGAGGAGGTTCATGAAATATTCACAAAATCTTTCTTCTGGGATGTTTTGCAGCAACAGCTATCAAAGCCCCTTGGTTCTGAGCTTGTTTCAAAAGCAAAGACAAGGTAAGATTTTTATGCCTTTATACATTAATTAATGCCTTCTGGTTAGTTCTAGACCTTACTTTGCATACCAAAATTTTTTGACCTGATAAAAGATTTCCAATAATGTAACATGGTGTTCTTGTATTTCTTTCCATACCAGAAGAAATATGTAGGTCTACTGAGTATCAGCCTGTCAATTAGTGAGAAGAAAATAACTCGCAAAGCTGAGTTTTCTACTCTGATGTCAGCAAGACAATTCTGAGTGTGTTTGTGACAGATCAAAAACTTTGGTTTATGTGTGTAGCTTGATATAGTGTGTTATGAGCAAGTTGAAATAACTGTTATTGCCCAGATGGTTCATTTAGTTTGTAGCTGGAATGCCTGTAAGTCTATAGAAGTATTAGTTTTTCCTTTTACTTCAACTTCCTATGAGCATGTCTGTTTGGGTACACTAGAAGACGATACTAATTGCCGGGTGAAAAAAATAATTCTAACCCGGATTCTTATGAGATGATTTGATAAATCATTTTTGGCTTGTCCCTTCGAGAGAATCTTACTGACATGATTATATTTTCGTGATCAGGGAGGAGTTAGTGCATCAATTGCACAAATTAGATTGTTGGCCTCTGAAAGGCCTAGCTGAGAAAGATCTCCATCAGCTGGTGAATATTTTAGTTTCAGAGAAGAAATGGGTTGAAGAAACCCCTTCCAGGTATTTTCCGTTTCGTCTTACCCTTCCTCACAAGAGAACATGCATTCCATCGAACTCCAGGAAGTTTGATGGTCTCAGTTCTCTGTTTTCCAATGGGAAGCCATTGCCGGGCAAATACACTGGTGATCAAAGCACAAACAGTCCTCTCCCTAGGGAGGAAACTTTGTCGGACTGTCACAAGCTGTTAAAGGACCTTCTTCTGGAATATGAATATGGTTTTAACATCAGCATTTTCAAGCTTCGTTTTGCTCAGAAGCATGGATATGAGCTAGACCCTCAAAAGCTTGGATATCCAGACCTTAAGTCCCTGTTGCAGATTATGCCTGGTGTGAGAGTAAAATTTCCAAGGGTTCTACCTGCAGAAAACGGAAATGGCCAAGCTGGCAGCAAGGGCAATGGAAATCAAAGTAATGGCGATGACTTTGTTTGGGAGGAACTTGGTCCTGTATCTGCTACCACTGAAACTGTGCAAACTGTTGACAAAGAAATGTGCTACCGTCCTCCTACTCTTTCAGATGATGATTTTTCAGAGGATGAGAACCATGCAGACCAGCAGCCTAGAAAAGAGGCTGAAGCAAGCTCGCTCCTCCAAATTATTGATTCCTGGCACAATAGTAAGGATGTCTCTAGCAAAAAAACTCAAGACATTGATGGGCTTGTTGATTGTTCAAGGAGTGACCATGGCTATCTTGACAATCTGACCGGAGGAAATGCACCGAAGCCTACAAGGCCACAGCATAAACAGTACTCTTTCGTGTCAGACTCGGAAGAAGATACAGAGAAGGGTAAGCTAGTTGAGAGCGTCTTGGGCAGCTTGCAAAAAGCACGGACCTCAAAGTTGCACAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036579