BGIOSGA036622

From RiceWiki
Revision as of 08:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036622| Description = Putative transporter| Definition = Oryza sativa Indica Group BGIOSGA036622, complete gene.| tag = | tid = BGIOSGA036...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036622

Description

Putative transporter

Definition

Oryza sativa Indica Group BGIOSGA036622, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036622-TA

Ensembl Protein ID

BGIOSGA036622-PA

Length

2618

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2783151..2785768

Sequence Coding Region

2785636..2785768,2784885..2785069),complement(2784600..2784800,2784101..2784262),complement(2783151..2783471

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2783151..2785768 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2783151..2785768 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTTCTTCCATGAGCAAATCCGACAAGAAGAAGGTGCTAGATTTTGCGGCATGGAGTTTCAACATCACCACATCCGTTGGAATCATCATGGTCAACAAGGCTCTGATGGCTACACATGGATTCAGTTTCGCCACAACATTAACTGGTCTTCATTTTGTGACAACCACCTTGATGACTATCGTGTTTCGGTGGTTAGGCCTCAGCCAGCCCTCCCACTTACCAATACCAGATCTGATTAAGTTTGTGATCTTTTCGAACTTGTCAATTGTTGGAATGAATGTGAGCTTGATGTGGAACTCTGTGGGATTTTATCAGATAGCAAAGCTGTGCATGATACCTGCATCATGTCTCCTGGAGGTTGTCTTCGATCGTGTACATTACTCCCGGGACACAAAGCTGAGCATAATGGTTGTGCTTATAGGTGTTGCAGTCTGCACAGTTACTGATGTCAGTGTAAATGCAAAAGGTCTGGCTGCTGCTGTTATAGCTGTTTGGAGCACAGCTTTACAACAATATTATGTTCATTTTCTCCAAAGGAAGTACTCTCTGAACTCATTCAACCTCCTGGGCCACACTGCTCCAGCCCAAGCGGGATCTCTTCTGCTAGTTGGGCCCTTTGTAGATTTCTTGTTGACAGGCAAAAGAGTGGATCACTTTGGTTTCACATCGATTGCTTTGTTTTTCCTGACTCTCTCATGTGTCATTGCCATTGGTGTTAATCTGAGCCAATTTATCTGCATTGGTCGGTTTTCTGCCGTATCCTTCCAAGTCCTGGGCCACATGAAGACAGTGCTCGTCTTGTCCCTTGGGTTTCTCTTCTTTGGCAAGGAAGGTCTGAATTTTCAGGTAGTCCTTGGGATGATCCTTGCTGTTGTTGGGATGATATGGTATGGGAATGCATCAGCTAAACCAGGTGGCAAAGAGCGGCGCAGCGTTCTTCCAGTAAGGTCTGAGAAGCCTAATGGAGCATTAGACGAGAAGGATGGCAGTGAGAAATAG</cdnaseq>

Protein Sequence

<aaseq>MTSSMSKSDKKKVLDFAAWSFNITTSVGIIMVNKALMATHGFSFATTLTGLHFVTTTLMTIVFRWLGLSQPSHLPIPDLIKFVIFSNLSIVGMNVSLMWNSVGFYQIAKLCMIPASCLLEVVFDRVHYSRDTKLSIMVVLIGVAVCTVTDVSVNAKGLAAAVIAVWSTALQQYYVHFLQRKYSLNSFNLLGHTAPAQAGSLLLVGPFVDFLLTGKRVDHFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAVSFQVLGHMKTVLVLSLGFLFFGKEGLNFQVVLGMILAVVGMIWYGNASAKPGGKERRSVLPVRSEKPNGALDEKDGSEK</aaseq>

Gene Sequence

<dnaseqindica>1..133#700..884#969..1169#1507..1668#2298..2618#ATGACTTCTTCCATGAGCAAATCCGACAAGAAGAAGGTGCTAGATTTTGCGGCATGGAGTTTCAACATCACCACATCCGTTGGAATCATCATGGTCAACAAGGCTCTGATGGCTACACATGGATTCAGTTTCGGTATGTTTTTTGCTACCTTAAGATATATATTTTGTGATGTTTTATTCCAGGCTACTCCGTGTTCTGGGATGACAAACTTGCAGTATTATGTTGTTTTAGTATAGAACGAATAAATGCTACTAGATCTTATGTAATTGTGGATTCTAGATGTTTGTTCCTTGGGGCATGCAATTAAACAATTGACTGACAGGCATCTTTAAACTTTGAGTAATTTTTTATCAAATTCCAATCATTTGAATTCTAGATAATCCATATGCCAAAGAAGTTCGCCGGATTTGTTTTTGTTGTGATCTAAAACAAATTAAAAGTGAACCTATAAGGTATCCGGTGGACCTGAAAACCACGCTGTTCTAGCTGCTATGAGAATTATGATCATAATTTCTTGTCACAAGCTGCCACTCTGCTTGATGAACATTAAAAGGGCCTTAATGGAACAGTGGAAGCACACTATATTATCCAGTTTCTTGTTGTGTCCAACAAGATTTATGGGCTGCTCCTCAACATACACATACTTCATTTGTATGATAATGGATGCCATGTAACTGACTGTGTTTTGTATTTTGCAGCCACAACATTAACTGGTCTTCATTTTGTGACAACCACCTTGATGACTATCGTGTTTCGGTGGTTAGGCCTCAGCCAGCCCTCCCACTTACCAATACCAGATCTGATTAAGTTTGTGATCTTTTCGAACTTGTCAATTGTTGGAATGAATGTGAGCTTGATGTGGAACTCTGTGGGATTTTATCAGGTTAGCAAAGGACCGTTCTAGTAGCTAGATTCCATCATGGCTTTAAACTTTCAACTACTAAACAATCCTTTTTCTTCCCTTCAGATAGCAAAGCTGTGCATGATACCTGCATCATGTCTCCTGGAGGTTGTCTTCGATCGTGTACATTACTCCCGGGACACAAAGCTGAGCATAATGGTTGTGCTTATAGGTGTTGCAGTCTGCACAGTTACTGATGTCAGTGTAAATGCAAAAGGTCTGGCTGCTGCTGTTATAGCTGTTTGGAGCACAGCTTTACAACAATATGTAAGTTAAAATCACCACCCTTGTTGTATGGTTATGTCTTATATATCAGCTATGAGATAAGATTGCATTCTATTCCTATAGCTCTCCTTTGGCAGCCATGAACATTTTTATGAGGGGGAAATTAGTACATGGTGGTACAACAGTAACTGTGGCTATCTATTTGTCTTCTTATTGATGAATGATGAATAGTTGGCGCTCCCTGAATCATTATTGGTTCCCTGCAGTCCTTGTTAGTTATGAATAATTGGCACTCCCTAAATCATTTGTTTGTTTGTCACTTCTTTAATTATAGACAAATTACTCATTAGTTTCCTTTCCTTTTCTATTTTCCTTGCAGTATGTTCATTTTCTCCAAAGGAAGTACTCTCTGAACTCATTCAACCTCCTGGGCCACACTGCTCCAGCCCAAGCGGGATCTCTTCTGCTAGTTGGGCCCTTTGTAGATTTCTTGTTGACAGGCAAAAGAGTGGATCACTTTGGTTTCACATCGATTGCTTTGGTAAGAGGCTAGCCTCATTACAATGCTTTGTTTCTGATCTAAGTTAGACAAAACCACAGGAATTTTGGCATGTGACACAAAACCATGATTCTAAAGTTTCACAAACCAACACCGTTAACCATTTTGACATACTCATATATTAAAATTTTACAAAGCGGATGTAATATTTATATGATGGATAAAACGCTCATAAATTTGAGATGTGATTGTATAACTCAAAAGTGTGGTAGATATAAGTTAAAATGATCAATAGTGTGGTTTTGTGAAACTCTAGGATTATAATATGTGGGGTTATATGTCACATGCCAAAATCCCAGTGGTTTTGTGCAACTTGGACCATAATATGTGGGATTTTATGAAATTTACTCATTTTCAAATGACCTAGACTAGCATTACATTTCCTCTTGTGACCACAAAAGTCTTTACTTCATAGCATCACTTGTTAGCAGTAACTTCAAACAACTATAGTCTATAGATTTCCTTTTATGTGCAATCTCTTGCTTGTTATTAGTCTATAGTTACACTTTACTTGGTTGGAATATGGATGAATTTGAGTCAATGCTTGATTTGTTTGTAATTTGACCTCAAATTTTCCATTTCATCTTACGATGGTTTTTATTGTTCCGCAGTTTTTCCTGACTCTCTCATGTGTCATTGCCATTGGTGTTAATCTGAGCCAATTTATCTGCATTGGTCGGTTTTCTGCCGTATCCTTCCAAGTCCTGGGCCACATGAAGACAGTGCTCGTCTTGTCCCTTGGGTTTCTCTTCTTTGGCAAGGAAGGTCTGAATTTTCAGGTAGTCCTTGGGATGATCCTTGCTGTTGTTGGGATGATATGGTATGGGAATGCATCAGCTAAACCAGGTGGCAAAGAGCGGCGCAGCGTTCTTCCAGTAAGGTCTGAGAAGCCTAATGGAGCATTAGACGAGAAGGATGGCAGTGAGAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036622