BGIOSGA036639

From RiceWiki
Revision as of 08:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036639| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036639, complete gene.| tag = OsI_374...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036639

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036639, complete gene.

LocusTag

OsI_37457

Ensembl Transcript ID

BGIOSGA036639-TA

Ensembl Protein ID

BGIOSGA036639-PA

Length

2414

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2422286..2424699

Sequence Coding Region

2423100..2424699,2422286..2423004

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2422286..2424699 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2422286..2424699 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGCTGCTGTTGTTGCGTTCTTTGGAGTTCTTGGCGATCATGGCGGTTGCATCGAGCTTGGCAATGCCGGTGGCGGCCGCGGCTGCGGTGCCACAGCCGGAGCCGGAGGTGAAGCCGAGCGACACCGACGCGCTCACCATCTTCCGGAACGGCGCCGACGCGCACGGCATCCTGGCGGCGAACTGGAGCACCTCGAACGCCTGCGCCGGCGGGTGGATCGGCGTCGGCTGCGCCGGCGACGGCCGCCGCGTGACGTCGCTGTCGCTGCCGTCGCTCGACCTGCGTGGGCCGCTCGACCCGCTCTCCCACCTCGGCGAGCTCCGGGCGCTCGACCTCCGCGGGAACCGCCTCAACGGCACGCTCGACACGCTCCTCCTCGGCGTCCCCAACCTCAAGCTGCTCTACCTCTCCCACAACGACATCTCCGGCGCCATCCCGGACGCCATCGCGCGGCTCCTCCGCCTCCTCCGCCTCGACCTCGCCGACAACAGCCTGCGCGGGGCCATCCCGGTGGCCGCGCTCGCCAACCTCACCGGCCTCCTCACGCTCAAGCTCCAGGACAACCTCCTCACCGGCTTGCTCCCGGACGTCACCGCCGCCCTCCCGCGCCTCGCCGAGTTCAACGCCTCCAACAACCAGCTCTCCGGCAGGGTGCCCGACGCCATGCGCGCCAAGTTCGGCCTCGCCTCGTTCGCCGGCAATGCCGGCCTCTGCGGGCTGGCGCCGCCGCTGCCGGCGTGCTCTTTCATGCCGCGCGAGCCAGCCCCGACGTCACCCTCCGTCCCGTCGTCGCCGCAGTCCGTGGTGCCATCGAACCCGGCGGCGTCGTCGTCGTCGGTTGCTTCGTCCTCGCCGGCGTTGGCCACACCGGAGTCGCGCGACGGATCCGGCAAGGGGGGGTTGAGCACCGGCGCCATTGCCGGCATCGTCGTCGGCAATGCTCTCTTCCTGTTCGCCATGCTGTCGCTGCTCGTGGCGTACTGCTGCTGCAGCACCGGCGGCGAGAGCGGCGGCGAGCCACCCAAGAAGAGGAAACGAGGCGGCCGCGTCGGCCTGGAGGATGACGACGACGGCGGGATGTTCGGCCAAGGCAAGGGCGTGCAGCCAGGCCGGCCAGGCAGCGCCGGCATGCGCAGCGACGACGGCGGAGACAGCGACGGCGCGCGCAGCAAGCTGGTGTTCTTCGGGGTGGACGGCGGCGAGGACGACGACGACGACGACGGAGGCGGCAGCGACAGCAGCGCCGGCAGGAGGGCAACCGGCGGCGGCTGGACGGCGGCGCCGCACCAGCCTCACGGGAGGAGGAGCAGGTTCGCGCTGGAGGAGCTTCTCCGCGCGTCGGCGGAGATGGTCGGCCGCGGCAGCCTGGGCACCGTGTACCGCGCCGTCCTCAGCGACGGCCGCATGGTCGCCGTCAAGCGGCTGCGCGACGCCAACCCATGCGCCCGCGACGAGTTCCACCGCTACATGGACCTCATCGGCCGCCTCCGCCACCCAAACCTCGTCCCCCTCCGAGCCTTCTACTACGCCAAGCAGGAGAAGCTCCTCATCTACGACTACCTCCCCAATGGCAACCTCCATGACCGCCTCCACGGGCACCGGATGTCGGGGGAGTCGCCGTTGGACTGGACGACGAGGGTGAGGCTTCTCCTCGGCGCGGCGCGCGGGCTGGCATGCGTCCACCGGGAGTACCGCACGTCGGCGATCCCCCACGGCAACGTCAAGTCCACCAACGTCCTGCTCGACAAGAACGGCGTCGCCTGCGTCGCCGACTTCGGCCTGGCGCTCCTCCTCAGCCCGGCGCACGCCATTGCCCGCCTCGGAGGCTACATCGCGCCGGAGCAGGAGGACAACAAGCGGCTGTCGCAGGAGGCCGACGTGTACAGCTTCGGCGTGCTCGTCCTCGAGGCGCTCACCGGGAAGGTGCCGGCGCAGTACCCGCAGCCGTCGCCGGTCGTCGCCCCCGACGCCGCCGCAGACGCGCAGAGGAAAGACAAGAGGTGCTCGACGGCGGTGAGCCTGCCGGAGTGGGTGCGATCGGTGGTGCGGGAGGAGTGGACGGCGGAGGTGTTCGACGTGGAGCTGCTCCGGTACAAGGACATCGAGGAGGAGATGGTGGCGATGCTGCACGTCGCGCTGGCGTGCGTCACGCCGCAGCCGGAGCAGAGGCCGTCCATGGCCGACGTGGTGCGGATGATCGAGAGCATCCCGGTGGATCAGTCGCCGTTCCCGGAGGAGGACAGGGACATCTCCACCATGTCGCCGTCGATCGGCATTACCACTGACGACGGAGATGGTCGTCTCAGCTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAMLLLLRSLEFLAIMAVASSLAMPVAAAAAVPQPEPEVKPSDTDALTIFRNGADAHGILAANWSTSNACAGGWIGVGCAGDGRRVTSLSLPSLDLRGPLDPLSHLGELRALDLRGNRLNGTLDTLLLGVPNLKLLYLSHNDISGAIPDAIARLLRLLRLDLADNSLRGAIPVAALANLTGLLTLKLQDNLLTGLLPDVTAALPRLAEFNASNNQLSGRVPDAMRAKFGLASFAGNAGLCGLAPPLPACSFMPREPAPTSPSVPSSPQSVVPSNPAASSSSVASSSPALATPESRDGSGKGGLSTGAIAGIVVGNALFLFAMLSLLVAYCCCSTGGESGGEPPKKRKRGGRVGLEDDDDGGMFGQGKGVQPGRPGSAGMRSDDGGDSDGARSKLVFFGVDGGEDDDDDDGGGSDSSAGRRATGGGWTAAPHQPHGRRSRFALEELLRASAEMVGRGSLGTVYRAVLSDGRMVAVKRLRDANPCARDEFHRYMDLIGRLRHPNLVPLRAFYYAKQEKLLIYDYLPNGNLHDRLHGHRMSGESPLDWTTRVRLLLGAARGLACVHREYRTSAIPHGNVKSTNVLLDKNGVACVADFGLALLLSPAHAIARLGGYIAPEQEDNKRLSQEADVYSFGVLVLEALTGKVPAQYPQPSPVVAPDAAADAQRKDKRCSTAVSLPEWVRSVVREEWTAEVFDVELLRYKDIEEEMVAMLHVALACVTPQPEQRPSMADVVRMIESIPVDQSPFPEEDRDISTMSPSIGITTDDGDGRLSC</aaseq>

Gene Sequence

<dnaseqindica>1..1600#1696..2414#ATGGCGATGCTGCTGTTGTTGCGTTCTTTGGAGTTCTTGGCGATCATGGCGGTTGCATCGAGCTTGGCAATGCCGGTGGCGGCCGCGGCTGCGGTGCCACAGCCGGAGCCGGAGGTGAAGCCGAGCGACACCGACGCGCTCACCATCTTCCGGAACGGCGCCGACGCGCACGGCATCCTGGCGGCGAACTGGAGCACCTCGAACGCCTGCGCCGGCGGGTGGATCGGCGTCGGCTGCGCCGGCGACGGCCGCCGCGTGACGTCGCTGTCGCTGCCGTCGCTCGACCTGCGTGGGCCGCTCGACCCGCTCTCCCACCTCGGCGAGCTCCGGGCGCTCGACCTCCGCGGGAACCGCCTCAACGGCACGCTCGACACGCTCCTCCTCGGCGTCCCCAACCTCAAGCTGCTCTACCTCTCCCACAACGACATCTCCGGCGCCATCCCGGACGCCATCGCGCGGCTCCTCCGCCTCCTCCGCCTCGACCTCGCCGACAACAGCCTGCGCGGGGCCATCCCGGTGGCCGCGCTCGCCAACCTCACCGGCCTCCTCACGCTCAAGCTCCAGGACAACCTCCTCACCGGCTTGCTCCCGGACGTCACCGCCGCCCTCCCGCGCCTCGCCGAGTTCAACGCCTCCAACAACCAGCTCTCCGGCAGGGTGCCCGACGCCATGCGCGCCAAGTTCGGCCTCGCCTCGTTCGCCGGCAATGCCGGCCTCTGCGGGCTGGCGCCGCCGCTGCCGGCGTGCTCTTTCATGCCGCGCGAGCCAGCCCCGACGTCACCCTCCGTCCCGTCGTCGCCGCAGTCCGTGGTGCCATCGAACCCGGCGGCGTCGTCGTCGTCGGTTGCTTCGTCCTCGCCGGCGTTGGCCACACCGGAGTCGCGCGACGGATCCGGCAAGGGGGGGTTGAGCACCGGCGCCATTGCCGGCATCGTCGTCGGCAATGCTCTCTTCCTGTTCGCCATGCTGTCGCTGCTCGTGGCGTACTGCTGCTGCAGCACCGGCGGCGAGAGCGGCGGCGAGCCACCCAAGAAGAGGAAACGAGGCGGCCGCGTCGGCCTGGAGGATGACGACGACGGCGGGATGTTCGGCCAAGGCAAGGGCGTGCAGCCAGGCCGGCCAGGCAGCGCCGGCATGCGCAGCGACGACGGCGGAGACAGCGACGGCGCGCGCAGCAAGCTGGTGTTCTTCGGGGTGGACGGCGGCGAGGACGACGACGACGACGACGGAGGCGGCAGCGACAGCAGCGCCGGCAGGAGGGCAACCGGCGGCGGCTGGACGGCGGCGCCGCACCAGCCTCACGGGAGGAGGAGCAGGTTCGCGCTGGAGGAGCTTCTCCGCGCGTCGGCGGAGATGGTCGGCCGCGGCAGCCTGGGCACCGTGTACCGCGCCGTCCTCAGCGACGGCCGCATGGTCGCCGTCAAGCGGCTGCGCGACGCCAACCCATGCGCCCGCGACGAGTTCCACCGCTACATGGACCTCATCGGCCGCCTCCGCCACCCAAACCTCGTCCCCCTCCGAGCCTTCTACTACGCCAAGCAGGAGAAGCTCCTCATCTACGACTACCTCCCCAATGGCAACCTCCATGACCGCCTCCACGGTACACATCCATGTCTGATGTCTCCTCCTCCTAGCTGTGAATCGCCATGAGAGTGGCACGATGAGCCCGATCTCGCCATTGATTGTGTTTGTCAGGGCACCGGATGTCGGGGGAGTCGCCGTTGGACTGGACGACGAGGGTGAGGCTTCTCCTCGGCGCGGCGCGCGGGCTGGCATGCGTCCACCGGGAGTACCGCACGTCGGCGATCCCCCACGGCAACGTCAAGTCCACCAACGTCCTGCTCGACAAGAACGGCGTCGCCTGCGTCGCCGACTTCGGCCTGGCGCTCCTCCTCAGCCCGGCGCACGCCATTGCCCGCCTCGGAGGCTACATCGCGCCGGAGCAGGAGGACAACAAGCGGCTGTCGCAGGAGGCCGACGTGTACAGCTTCGGCGTGCTCGTCCTCGAGGCGCTCACCGGGAAGGTGCCGGCGCAGTACCCGCAGCCGTCGCCGGTCGTCGCCCCCGACGCCGCCGCAGACGCGCAGAGGAAAGACAAGAGGTGCTCGACGGCGGTGAGCCTGCCGGAGTGGGTGCGATCGGTGGTGCGGGAGGAGTGGACGGCGGAGGTGTTCGACGTGGAGCTGCTCCGGTACAAGGACATCGAGGAGGAGATGGTGGCGATGCTGCACGTCGCGCTGGCGTGCGTCACGCCGCAGCCGGAGCAGAGGCCGTCCATGGCCGACGTGGTGCGGATGATCGAGAGCATCCCGGTGGATCAGTCGCCGTTCCCGGAGGAGGACAGGGACATCTCCACCATGTCGCCGTCGATCGGCATTACCACTGACGACGGAGATGGTCGTCTCAGCTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036639