BGIOSGA036642

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Revision as of 08:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036642| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036642, complete gene.| tag = OsI_374...")
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Gene Name

BGIOSGA036642

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036642, complete gene.

LocusTag

OsI_37447

Ensembl Transcript ID

BGIOSGA036642-TA

Ensembl Protein ID

BGIOSGA036642-PA

Length

3612

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2348405..2352016

Sequence Coding Region

2351917..2352016,2351023..2351114),complement(2350805..2350876,2350670..2350708),complement(2350447..2350504
,2350316..2350361),complement(2349670..2349715,2349172..2349264),complement(2349018..2349086
,2348841..2348919),complement(2348405..2348757

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2348405..2352016 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2348405..2352016 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGTCCAAGCAGTACGACGAAGGCGGGCAGCTCCAGCTCATGGATGCAGAGAGGATCGAGGAGGAGGAGGAGTGCTTCGAGTCCATCGACAAGTTAATCTCGCAAGGGATAAACTCTGGAGATGTGAAGAAGCTGCAGGATGCTGGTATCTACACTTGCAATGGCCTCATGATGCATACAAAGAAGAGCCTGACAGGAATCAAGGGATTATCTGAAGCAAAGGTAGACAAGATCTGTGAAGCAGCTGAAAAGCTTCTGAGCCAGGGCTTCATGACAGGAAGTGATCTCCTTATCAAGCGGAAGTCTGTTGTTCGGATCACCACTGGGAGCCAGGCACTTGATGAGCTGCTTGGCGGAGGGATTGAAACACTCTGCATCACAGAGGCATTTGGAGAGTTCCGATCAGGGAAGACCCAGTTGGCTCACACTCTATGTGTCTCCACTCAGATCATATATGCTCGTGCATACACCTATGAGCACCAGTACAACTTGCTCCTTGGCCTCGCTGCCAAGATGGCTGAAGAGCCTTTCAGGCTTCTGATTGTGGATTCTGTGATTGCACTATTCCGTGTTGATTTCAGTGGCAGGGGTGAACTTGCAGAGCGCCAGCAAAAATTGGCACAGATGCTCTCCCGCCTTACTAAGATAGCTGAGGAGTTCAATGTTGCAGTGTACATCACCAACCAAGTGATTGCGGACCCAGGTGGTGGAATGTTCATAACTGACCCGAAGAAACCTGCGGGAGGCCACGTTCTGGCGCATGCAGCCACCATCCGGTTGATGCTGAGGAAAGGCAAAGGAGAGCAGCGTGTCTGCAAGATCTTTGATGCCCCTAACCTGCCTGAGGGAGAAGCTATATCCTTTTGCATTGTGCATACATGTTTACTGAAACTACTTGTTCAATTGGTTACCTTGGTTCAGTATGCTGCTAAAATATTGATTGATTTTTTCTTTGTCCGAACTTTCTCCTCAAAACTCTTGCAGCTGCTGTTTTTCCCATCTGAAAAAAAAACCTGTTGTTTTCCATCACTGAAACTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAPSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLMLRKGKGEQRVCKIFDAPNLPEGEAISFCIVHTCLLKLLVQLVTLVQYAAKILIDFFFVRTFSSKLLQLLFFPSEKKTCCFPSLKL</aaseq>

Gene Sequence

<dnaseqindica>1..100#903..994#1141..1212#1309..1347#1513..1570#1656..1701#2302..2347#2753..2845#2931..2999#3098..3176#3260..3612#ATGGCGCCGTCCAAGCAGTACGACGAAGGCGGGCAGCTCCAGCTCATGGATGCAGAGAGGATCGAGGAGGAGGAGGAGTGCTTCGAGTCCATCGACAAGTGTATGTAACGCCCTCCGCCTCATCTCCATCCCCTCCTCCCCCGTCTCGTATCCCGGCACTGCATTGCTTGGCTCGTGCTCGTGTGCGCGTGTGTGTTCGCGCGTGCGAGTGCTCATTCTGCCTTGCGTTTCGATTGGTTACTCTTCACATTGTAATTTGATGCTGATTTGCGGTGAAGTAGATGGATTCTAGCCTATTTTGTGTTTCCATTTTTTTTTGGGGTCTGGTTGTTTTGTGCTGTGCGTGTTCGGTTGCTTCTAGTTTTTCTCCCTCAATTTCGTGTGTTCTGGAGGTAAATTAGCCTCGTATCGTGGCCAATTTTTTCGGGATTTTTCGCCTCCCCACATTTGATATCTGTTTTGGGCTATTTCCTGCTGATCGATGTGTGGCATGTGAGAGGGCTGGTTCGAATTTATCCCCATTTTCAGTCAATTTTACCCGCGTTTGGTGGAACTCGTCGGAATTCGCCCCCGGCTAGTTCAAACATGTGGGGTTCTGCCCATTAGTTGAACCAGTTGTGTTTTGGTGAACTTGAGTGTATATTAGTTGAACCAGTTGTGTACTTGGAGGGTTTAGGGTTTAAGCTTGAGTCCCTCTTGTACTTTTACGATTTCTGGTGGCTCCCTAATTCTAGCGAGTTCAATATTAGTAAGTTGTTTTGGTGTGATCCTGACTTCTCCCTGGATTTCATTCTTCATATGGTTCTTCCTGCAAATTATTCATTCATATCCATGAATTCGAACTATGAGCAATTGAGCATAATCTCTGCATTATTATCCATCTCTCGTGCACTTGTCCACAGTAATCTCGCAAGGGATAAACTCTGGAGATGTGAAGAAGCTGCAGGATGCTGGTATCTACACTTGCAATGGCCTCATGATGCATACAAAGAAGGTTGCAAAATTGGGTTCCCAAATCTTCATGCTATCTCCCACTTGTTCTATTTCTGGTTTATGACGATTATATTCTTTCAATTGTCCCATTTCTGTCTTACAATATAATTATCTGATATTGTTTCAATATATGGATCCATCTTGTAGAGCCTGACAGGAATCAAGGGATTATCTGAAGCAAAGGTAGACAAGATCTGTGAAGCAGCTGAAAAGCTTCTGGTGTGGTTCTCTTTGCATTGTTTTTGGTCTGAAATCTTCATTACGTCAGTTCTGTATGATTTGTTCTTCTGAAACTGCTATGTTTGTTTTTCTCAGAGCCAGGGCTTCATGACAGGAAGTGATCTCCTTATCAAGGTAAGTTAATAGGAGCTGATCTGCGTACTAATGCATTTAAGGATATGGTGTTATGGCAAATAAGTGGAAACTATTCCTTGCTTCATGGACGCTAGAGTGCTTTTAGTTACTCCAGCTGTGCACTTTCCCTAGGCTGTTCGGTTTATTATTTTTCTTATTTTGAAGCGGAAGTCTGTTGTTCGGATCACCACTGGGAGCCAGGCACTTGATGAGCTGCTTGGCGGTAACATATATAGTCCTCTGACTCTGTTATGATCAGTTGTTCCATTATGTTGTTCTAATCTACTTGCATTTTTCAATTTTTCAAGGAGGGATTGAAACACTCTGCATCACAGAGGCATTTGGAGAGTTCCGGTGCGTAGATGTTCATGTTCCTTTTGATATTTTTTGCCCTCGTTTACAACTGCAGCTTGGTTGTATCAATGAAATTTATGATGTGTGGCCATACCTGTCTAATAAATATGGTGAAATCAAGCTTACTAATACTATTAGTATTCTGGTTTAAGTTAATTTGCTAGTGCCTTTTCAAACCTGTTGTGCACCCATTTCTATCGTCTATTCATGCCAGTGCATACAGCAATTCCTAAACATGTTCTGTGTTCTGCTAAAACTGAGAACTTAATACTGTACTTCTCATTTGTAAACTTCAGGTATATACACATCAATATTGTCAAACTATTTCCTTTGATGTTATACCAAATTGGTTCTACTAAACATTACATTTAGCTGATTTATCTTGTTTTGCAACAAATTTGATGTATGATAGAGTTCTTCCTAGAATTGTATCGCGTGGAACAATTTGGATTTCTGTAGCACATAAAACATCTTACTATTTAATTTTAATGTGAGCCAGCCAAACTTTGAACCTTGATGTGCTCTGGAGTTAGTTTTCACTATTTCTCAATTTGGTTCCGGCTTCCTAGCTTTGTAATCTTTCACTTTTTTGGTCCTCAGATCAGGGAAGACCCAGTTGGCTCACACTCTATGTGTCTCCACTCAGGTTCATTTTTAATACATGTTTTTGTCATCACCACCTTACTGCCATAGATTCAGTGAATTATTTTCTTTTTTTTTGTTCATAAACTGCAGCTTCCAATTCACATGCATGGGGGGAACGGGAAGGTTGCTTACATTGACACTGAGGGAACATTGTATCTTTTGAATTTACTTAGCAATAGCTTCATCTGATCCATCCATTCAATGGATTTATTTGCATTTCTGTATCTCTCCAACTTGTTTCCTTAATGGAGTTTTCAGCCGGCCTGAACGAATTGTGCCAATTGCTGAGAGATTTGGGATGGATGCCAATGCTGTTCTTGATAACGTATGGCCCTTAATTTGACTTTACCATTTCAGGCCTAACAAAAGAAGCTATCTGTTATATTTGCATCTATTTCTTGTTTAGATCATATATGCTCGTGCATACACCTATGAGCACCAGTACAACTTGCTCCTTGGCCTCGCTGCCAAGATGGCTGAAGAGCCTTTCAGGCTTCTGGTAGGCATGGCTTAACATAAAAATACATTGATAAGTTTGTGTATCTCAATCTCTTATGTGGTAGTATTGTTTTACCTGGAATTAGATTGTGGATTCTGTGATTGCACTATTCCGTGTTGATTTCAGTGGCAGGGGTGAACTTGCAGAGCGCCAGGTATTGCCAATATTTGTGTTGGCTAAAACACACACAAATAAATAATCATAAAGTAGTTGAAGGCCTAAAGTTATGTACTAATTACTCTGAACTTGCAGCAAAAATTGGCACAGATGCTCTCCCGCCTTACTAAGATAGCTGAGGAGTTCAATGTTGCAGTGTACATCACCAACCAAGGTGTGCTTTCAGGACTAATCCTGTCTATCCCAAGAAAGAGTAACTCAATAAGGAATTTCAAATTACAAGTGTCTTTGTTTCAGTGATTGCGGACCCAGGTGGTGGAATGTTCATAACTGACCCGAAGAAACCTGCGGGAGGCCACGTTCTGGCGCATGCAGCCACCATCCGGTTGATGCTGAGGAAAGGCAAAGGAGAGCAGCGTGTCTGCAAGATCTTTGATGCCCCTAACCTGCCTGAGGGAGAAGCTATATCCTTTTGCATTGTGCATACATGTTTACTGAAACTACTTGTTCAATTGGTTACCTTGGTTCAGTATGCTGCTAAAATATTGATTGATTTTTTCTTTGTCCGAACTTTCTCCTCAAAACTCTTGCAGCTGCTGTTTTTCCCATCTGAAAAAAAAACCTGTTGTTTTCCATCACTGAAACTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036642

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036642&oldid=52947"