BGIOSGA036644

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Revision as of 08:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036644| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036644, complete gene.| tag = OSDMC1A...")
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Gene Name

BGIOSGA036644

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036644, complete gene.

LocusTag

OSDMC1A

Ensembl Transcript ID

BGIOSGA036644-TA

Ensembl Protein ID

BGIOSGA036644-PA

Length

4958

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2308664..2313621

Sequence Coding Region

2313522..2313621,2312553..2312644),complement(2312335..2312406,2312203..2312241),complement(2311976..2312033
,2311845..2311890),complement(2311215..2311260,2311065..2311126),complement(2310897..2310963
,2310723..2310815),complement(2310573..2310641,2310402..2310480),complement(2310195..2310316
,2308664..2308909

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2308664..2313621 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2308664..2313621 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGTCCAAGCAGTACAGCGAAGGCGGGCAGCTCCAGCTCATGGACGCCGAGAGGATCGAGGAGGAGGAGGAGTGCTTCGAGTCCATCGACAAGCTAATCTCGCAAGGGATAAACTCTGGAGATGTGAAGAAGCTGCAGGATGCTGGTATCTACACTTGCAATGGCCTCATGATGCATACAAAGAAGAGCCTGACAGGAATCAAGGGATTATCTGAAGCAAAGGTAGACAAGATCTGCGAAGCAGCCGAAAAACTTCTGAGTCAGGGCTTCATAACAGGAAGTGATCTCCTTATTAAGCGGAAGTCTGTTGTTCGAATCACCACTGGGAGCCAGGCGCTTGACAAGCTGCTTGGCGGAGGGATTGAAACACTTTGCATCACAGAGGCATTTGGAGAATTTCGATCAGGGAAGACCCAGTTGGCTCACACTCTATGCGTCTCCACTCAGCTTCCAATCCACATGCATGGGGGGAACGGGAAGGTTGCTTACATTGATACTGAGGGAACATTCCGGCCTGAACGAATTGTGCCGATTGCTGAGAGATTTGGGATGGATGCCAATGCTGTTCTTGATAATATCATATATGCTCGTGCATACACCTATGAGCACCAGTACAACCTTCTCCTTGGCCTTGCCGCTAAGATGGCTGAAGAGCCTTTCAGGCTTCTGATTGTGGATTCTGTGATCGCACTATTCCGTGTCGATTTCAGTGGCAGGGGTGAACTTGCAGAGCGCCAGCAAAAATTGGCACAGATGCTCTCCCGCCTTACTAAAATAGCTGAGGAGTTCAATGTTGCAGTGTACATCACCAACCAAGTGATTGCCGACCCAGGTGGTGGAATGTTCATAACTGACCTGAAAAAACCAGCGGGAGGCCACGTGCTGGCGCATGCAGCTACCATCCGGTTGATGCTGAGGAAAGGAAAAGGAGAGCAGCGTAGCGCGGCGGCAGAGAGGGCAGATGCAGCTGAGCCGGAGCCAGTCGAAGATGCAGCGCTGGTGGAAGGTGTGGGAGCACGGCATCATCCTCAGCTTCTCCTCCGCCACGAAATCCTGCAAGCAAACGGCGCACTCCTCCTCCCTCGCGCCGGCCGCCGTCACCTCACGCAGGCCTTGGATGGCCTTGCTCAGCTCGCCTGTAGGACGCAGCCGCCTCGTCGGAGATCTGTGGCGTGGGGTGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAPSKQYSEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDLKKPAGGHVLAHAATIRLMLRKGKGEQRSAAAERADAAEPEPVEDAALVEGVGARHHPQLLLRHEILQANGALLLPRAGRRHLTQALDGLAQLACRTQPPRRRSVAWGG</aaseq>

Gene Sequence

<dnaseqindica>1..100#978..1069#1216..1287#1381..1419#1589..1646#1732..1777#2362..2407#2496..2557#2659..2725#2807..2899#2981..3049#3142..3220#3306..3427#4713..4958#ATGGCGCCGTCCAAGCAGTACAGCGAAGGCGGGCAGCTCCAGCTCATGGACGCCGAGAGGATCGAGGAGGAGGAGGAGTGCTTCGAGTCCATCGACAAGCGTACGCCCTCCGCCTCATCTCCATCCCTTCCTCCCCCTGTCTCGTATCCCGCACTGCATTGCTTGGCGCGCCTGCTCGTGTGCGTTCGTGTGTGTTCGCGTGTGTTCGCGCGTGCGAGTGGCAGTGCTCGTTCTGCCTCGCCTTTCAATTAGTCGCTGTTCGACTTGTAGTTCGATGCTTGATTCGCGGTGAAGTAAACGAGATTTAGCATTAGTACGTTTCCACTTTTTTTTTGTTGGTTTCGATTCTGCTTGCGAGCAGCGTCTGGATGCTTTGTGATGTGCGTGTTGGGTTGCTTCTAGTTTTCCCCCCAATTTCGTGCGTTCTGGACATAAATTAGCCTCGTCTCGTGACGAATTTGTTCTGGAATTTTCGCCGCTCCACAATTGATCTCTGTTTTTGGGCTATTTCCTGCTGATCGGTGTGTGGATCGCCACATCGCTTGCTATGAGAGGATCGATTAGAATTTATCCCCATTTTTAGTCAAATTTACACGCGTTTTGCATTAACCCGTCAAAATGATCGCTGGAACTCGTCGGAATTCTCCACCGGCTAGTTTAAACATTTGCATTTTCTGCATATTAGTTGAATCAGTTGTGTGTTTTGGTGCACTTGGAGTGCATTTAGTTGAACCAGTTGTGTATGGGTGCACTTGGAGGTTTAGGGATTAAGCTTGAGTTCCTCTTGCACTTTACGTTTTCTGGTGGCTCCCTAACTCTAGCGAGTTCAATTTTAGTAAGTTGTTTGGTGTGATCCTGACATTTGCCTGTGTTTCATGCTTCATTTGGTTCTTCCTGCAAATTATTCATTGCCGTGAATTCAAACTAATGAGCATAGTTCCTGCATTACTGTTCATCTCTGGTGCACTTGTCTACAGTAATCTCGCAAGGGATAAACTCTGGAGATGTGAAGAAGCTGCAGGATGCTGGTATCTACACTTGCAATGGCCTCATGATGCATACAAAGAAGGTTGTGAACTCGGGATCCCAAACCTTCATGCCATCTCCTGCTTGTTCCATTTCTGGTTTATGACACCCATCTTCTTTCGTTTGTTCTATTTCTTTCTTACAGTATGCTTATCTGATATTGTTTCAATATATGGATTCATCTTGTAGAGCCTGACAGGAATCAAGGGATTATCTGAAGCAAAGGTAGACAAGATCTGCGAAGCAGCCGAAAAACTTCTGGTGTGGTTCTCTTTTCATTATTAAAGTCTGAAAGCTTCACTGTCAATTCTGTGTGATACATTCTTCTGAAATTGCTATATTTGTTTTTCTCAGAGTCAGGGCTTCATAACAGGAAGTGATCTCCTTATTAAGGTAAGGAAATAGGAGCTAATCTGCATACAGCATACTAGTGTACAGGATATGGTGTTATAGCAAACTAAGTGGAAACTATTCCTTGCTTCATGGATGCTCTAGAGCTTTTAGTTACTCCAGCTGTGCACTTCCCTGGGCTGTTTGGTTTATTCTTTTTCTTCTTTTGAAGCGGAAGTCTGTTGTTCGAATCACCACTGGGAGCCAGGCGCTTGACAAGCTGCTTGGCGGTAGCATATATAGTCCTCTGATTATGTTATGATCAGTTGTTGCATTATGTTGTTCTAATCTATTTTCATTCTTCAAATTTTCAAGGAGGGATTGAAACACTTTGCATCACAGAGGCATTTGGAGAATTTCGGTGCGTAGACGTTCTTGTTCCTTTTGATTCTTTTTCCTGGATTACAACTGCAGATTGGTTGTACCAATGGAATGTGGCCATATCTGTCTAATAGATATGGTGAAAATCTAGCTTAGCAATATGGTTAGTATTCTGGTTGAAGTTAATTTGCTAAGGCTGTTGTGCTCCCATTTTTATCATTTATTCATGCCAGTATATACAGTAAATTCCTAAATATGTTTGTATTCTGCTAACACTGAGAACTTAATACTCCTCATGTGTAAACTTCAGGCATATACACATCAATATTGTCTGAAACTGTTTTCTTTGATGTTAATACTAAATTGGTTCTACTAAACATTAAATTTAGCTGAGATAATCTTGTTTTGCGACAAAGTTGATGTATTATAGAATGATTCCTTGAATTGCAGCTTGGAACAATTTGGCTTTGTGTAGCACATAAATAAAACATCTTACTATTTAATGTGAACCAGCCAAACTTTGACCCTTGATGTACTTTGATTTAACGTTCATCATTCGTCAATTTGGTTCCAGCTTCTTAGCTTTGTAATTTGTAATCTGTCATCTTTATTTTTGGTCCTCAGATCAGGGAAGACCCAGTTGGCTCACACTCTATGCGTCTCCACTCAGGTTCATTTCCGACACATTTTTGTCATCAACACCTTACTACCATAGATCCAATGAATAATTTTATTTATTTTTTGTTTGTGAACTGCAGCTTCCAATCCACATGCATGGGGGGAACGGGAAGGTTGCTTACATTGATACTGAGGGAACATTGTATCTTTTGAATTTACTGAGTAATAACTCAGCTGATTCACTCAATGGATTTATTTGCATTTCCATATCGCCCCAACTTGTTTCCTTAATGGAATTTTCAGCCGGCCTGAACGAATTGTGCCGATTGCTGAGAGATTTGGGATGGATGCCAATGCTGTTCTTGATAATGTATGGCTCTTAATTTGTCTTTACCATTTCAGGCCTAACAGATGAAGCTGTATGTTATATTTCCATTTATTTCTTGTTTAGATCATATATGCTCGTGCATACACCTATGAGCACCAGTACAACCTTCTCCTTGGCCTTGCCGCTAAGATGGCTGAAGAGCCTTTCAGGCTTCTGGTAGGCATGGCTCCATAACATAAAAGAACATTGATAAATTTGTGTATCTCAGTTACTTATGTGGTTGTTTTACCTGAGTAGATTGTGGATTCTGTGATCGCACTATTCCGTGTCGATTTCAGTGGCAGGGGTGAACTTGCAGAGCGCCAGGTATTGTCAATATTTGTGTTGGTAGAAACAAAAAAAAAATCATAAAGTAGTTGAAGGCCTAAAGTTATGTACTAATTACTCTGAACTTGCAGCAAAAATTGGCACAGATGCTCTCCCGCCTTACTAAAATAGCTGAGGAGTTCAATGTTGCAGTGTACATCACCAACCAAGGTGAGCTTTCAGGACTATCCTGTATATCCCAAGAAAGAGTAACACCATAAGGGATTTCAAATTACAAGTGTCCTCCTTGTTTCAGTGATTGCCGACCCAGGTGGTGGAATGTTCATAACTGACCTGAAAAAACCAGCGGGAGGCCACGTGCTGGCGCATGCAGCTACCATCCGGTTGATGCTGAGGAAAGGAAAAGGAGAGCAGCGTGTCTGCAAGATCTTTGATGCCCCTAACCTGCCTGAGGGAGAAGCTATATCCTTTTGTATTATACATATACATGTTTACCAAAACTTCTTGTGCAATTGGTAACTTCGGTTCAGTAGGTTGCTAAAATATTGATTGGTTTTTCTTTCTTTGTTCAGACTTGCTCCTCAAACTCTTGTGATTTAGTTAATTGCAGATGCTGTTTTCGGTGACTGGAAGTCCAAAAGCTTTGCATAACAGATTATTAATGGTGTGGTGTAAAATAGTTGCTTCCCTTGACCAATAACACGTTTTCCAGGTAACATCAGGTGGAATAATGGATGCGAAAGACTGAATGTTCATTGAGGGTGCTTCCTGTCTTCAAATTGTTCAGGTTTCTCCTAGTAAATTCCTGCATAGGCCATATGGGTTTGGTACATTGACTAAACTACTACTGCTACTTTGCCACTGTCGAGGAAATATGCAACCTCATTTATCCAGACGATTATACCTTAAAATGGGTATTTTTCTATGCTTATGAGATCAACAGTTGTACTGAAACAAATACAGTATTGTCTTAAGTGAAAAATATATAAGAGGTTTACATGATGGTAACTTTCCCCAGAAACTAAATTCTTTATACCCGCGTGTGCACAATTTATACAATCTGACTTATTCTGCTGTATCAGCTATAAGGTCCTTAATTATTTGATCAAACCCCAAACAATTATTTTTTGCGGCTTATCCTGGGATTTTTCCTTCAAGGACGTGGTCTAATCTCTCTATACTCCAGTTCTTCAGTCCCCCAATCTGCAATCTTCAGTTAAACCACAAAAGAATCCCAGCATGTGCGACAAGCATTTTCTCGTTAGAAGAGACTCCAGTTATCTTTTAGCATGCACTTCTTCAATTGGACAGAACAAGGATCATTAGCATAATCGGCATAGTTGCAGCTAAGCTAACAACAAAGAGAGTTGGAATGAACATGCCATTGTACTTGTAGTTTGATATTCGGTAGAGGAGATACATAACATGCTTCCAATTGAAAAGTACTACTCGATCTTGGAATAGATCGATAGAGAAACATGCTTCTAGCTTTAGCTTTACATTGATGGGACGATAAAACATCGTCTCAGTCTGTACAACACAACTCTTGGAACAGACAAATCACCAATCTGCCTAATGCAGAGGATATTTAGGTGAACAGAGGAACAAAATACAGCCTTTTGGCCGGTTCATCAGCTGGTTGCTCCTAGCTCCGGGCACCCAAGCTTGTCGTCATCCTCCTGCTGTAGTGCTGTGTGGGTAGAGCGCGGCGGCAGAGAGGGCAGATGCAGCTGAGCCGGAGCCAGTCGAAGATGCAGCGCTGGTGGAAGGTGTGGGAGCACGGCATCATCCTCAGCTTCTCCTCCGCCACGAAATCCTGCAAGCAAACGGCGCACTCCTCCTCCCTCGCGCCGGCCGCCGTCACCTCACGCAGGCCTTGGATGGCCTTGCTCAGCTCGCCTGTAGGACGCAGCCGCCTCGTCGGAGATCTGTGGCGTGGGGTGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036644