BGIOSGA036662

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Revision as of 08:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036662| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036662, complete gene.| tag = OSCPD2|...")
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Gene Name

BGIOSGA036662

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036662, complete gene.

LocusTag

OSCPD2

Ensembl Transcript ID

BGIOSGA036662-TA

Ensembl Protein ID

BGIOSGA036662-PA

Length

2823

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2118929..2121751

Sequence Coding Region

2121038..2121751,2120624..2120902),complement(2119894..2119980,2119650..2119728),complement(2119425..2119531
,2119174..2119310),complement(2118929..2119031

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2118929..2121751 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2118929..2121751 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCGCCGTCGTGGTTGCCATGGCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCAGGGGAAGAGGGCGCGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATTGGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTCCGCCTCATGGACGAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCTGCCTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGCGAGGAAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTGGAGGAGCTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTATGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAALLLLAAAAAAVVVAMALRWLLLLGGPAAGRQGKRARMPPGSTGLPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGERTVFSADPAFNRLLLAAEGRAVHSSYPSSIATLLGARSLLLTRGAAHKRLHSLTLTRLGRPASPPLLAHIDRLVLATMRQWEPAATVRLMDEAKKITFNLTVKQLVSIEPGPWTESLRREYVKLIDGFFSIPFPLACLLPFTTYGQALKARKKVAGALREVIKKRMEEKAENGGSIGDDEGKKEKKDMVEELLQAEGGSFSEEEMVDFCLSLLVAGYETTSVLMTLAVKFLTETPAALAELKEEHANIRDMKGKNQPLEWSDYKSMPFTQCVINETLRVGNIISGVFRRANTDIHYKDYTIPKGCKIFASFRAVHLNNEHYENARTFNPWRWQINNKLQNAVGANIFTPFGGGPRLCPGYELARVVVSIFLHHLVTRFSWEETEEDRLVFFPTTRTLKGYPINLRLLSESIC</aaseq>

Gene Sequence

<dnaseqindica>1..714#850..1128#1772..1858#2024..2102#2221..2327#2442..2578#2721..2823#ATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCGCCGTCGTGGTTGCCATGGCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCAGGGGAAGAGGGCGCGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATTGGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTCCGCCTCATGGACGAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCTGCCTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGTGCTCGTCCTTTTGCCTCCATTCATTTTTTTTTCTTTCCCTATGCATCTTGCCTAACAACAAATTGGCGTAAGCTATTGATGTACTCCTATATCTCTCATAAAAATGTGGCATTGCACGATTTGATTCCTACAGGCGAGGAAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTGGAGGAGCTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGTATAAAACTATTCAAATTAGTTGTTTGGTAATTGTCAATTCTTGTATACACGTGCGGTAGTAGGTACCAGGTGCTGTCAATTGTCAAATAACGGCTGAAATAGGAAGGAATTTCATTTATTATAGTTGGGTGTTAATTGTTAAAAATATGGTTGTTAGACTATCTTTCACACCAATTCTGTCCAAAAGAGAAGTTTCTACTTTCTATTTCCGGTCTGTTGTTTTTAGTCAAGTTCAACTACAGCTTTGTTCCTGGTTTGTTATTGACTTGAATACTTGATCCTGAGTATTAATTTATTATTGACTCGAATCATTTATGTTCTTGAGTCCTGACTTCTTTTAGTTTAACTGTGTAAGAATGAATCTTCACTTCAGTCAGTACTCTGGTTTCCTTTTTTTTTTTCTCATTTTATTTACTTGCATTGATGAGTGCTAGGTTCCTCAGTCTAACAACAAAGTGAGAGAATCGTAGCAATAATATCACAATAGGTCCAAATCTTAGAAATCTGAACTTTATGACTTTTCCTGGTACAAGTTTTGTTTCCAATATGTTAAGCTTTGAGAGTCCTCAAGATTGGTCCAAGTGGTATTTTTTACTTCACTACATGTGTAACTGATTCCAGATATCTTGCTGATTTTACAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGTGTAAGTTGGAAAGCCCTTGTTTTCTTAAAAATTAGCTACTCCTAAAAATATCATGCCAACAGCACGAATCCATCTAGTGTAAATGGCATCTCTTAACTGAACCTTTGAGACAGTACAGTTGGTTTACTCACATCATGATTAAATGAAGGGTTAACATTTCTGCAGGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGGTATTTCAATATAAACTATACTAAGCCCACGTACATTTTATTCATTATCTAAAAGAAGTCCCCATACATTTTTCATCAGAAATGCTCATTATGTATGGCATTTTTCTTTGTTTCTTAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTATGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGGTACTCCTAGGGGCTCTGTGTTATTGCTATTGGGTCTACTTATTCAATTATGTCCTGTGCTACAAAAGTAAAATGCACGCTGAAGATATCTGCAACAAATTTGTTCCTGTGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGGTGAGCCACCTTAATCTCTCTAATTCAATCGCTATCTTGCTAGCCATAAAGGTGTAGATAATCTGCAAATGAATTTTCCACAATTGTGATCCAAATTGGACACCAGTCTGATTCCATAACAACTTGACCAATCAATTTGCAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036662