BGIOSGA036675

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Revision as of 08:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036675| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036675, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA036675

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036675, complete gene.

LocusTag

OS12G0133000

Ensembl Transcript ID

BGIOSGA036675-TA

Ensembl Protein ID

BGIOSGA036675-PA

Length

6200

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1920506..1926705

Sequence Coding Region

1926534..1926705,1924893..1924933),complement(1924333..1924393,1924111..1924213),complement(1923926..1924028
,1923608..1923670),complement(1923483..1923532,1923305..1923380),complement(1922934..1923110
,1922647..1922734),complement(1922422..1922507,1922232..1922339),complement(1921851..1921895
,1921670..1921758),complement(1921505..1921548,1920506..1920597

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1920506..1926705 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1920506..1926705 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAGCGGCAGCGAGGAGGCGGCGCCGCTGCTGCTGCCGGTGGCGGCGGCGACGGCGACGGCGGAGGAGAGGTGCCCGGGGTGCGTGCAGGAGCGGAGGAAGGCGAGCCGCGGAGGGCGGATCCCCTACACGGAGCTCTTCTTCGTCGCCGTTACCACTCTTGCCTCATCTTTACCAATCACGTGCCTCTTCCCCTTCCTCTACTTCATGGTAAGGGACCTGCAAGTAGCACAAACAGAGGAGGACATTGGGTATTATGCTGGATTTCTTGGTGCTTCGTACATGGTTGGTAGATCCTTTGCCGCGATATTTTGGGGAGTTGTGGCAGATCGTATAGGAAGGAAACCTGTCATTGTGTTTTCAATATTGTCTGTGGTCATATTTAACACATTATTTGGGCTAAGTACAAAGTATTGGATGGCACTTACTACAAGGTTTGTTCTAGGTGCTCTAAATGGTTTACTTGCGCCAATAAAGGTTAACACAGCATGGGGTTTGGGTCTCGTTGTTGGTCCAGCTCTTGGAGGCTACCTTGCACAGCCTGTTGAAAAATATCCACATGTATTTTCTAAGGAGTCAGTTTTTGGGAGATTCCCGTATCTCTTACCTTGCCTTGGTGTATCATTGTTTGCTGCTATTGTTCTGATAAGTTGTATTTGGCTTCCGGAGACTATACATAAACATAAATCTCCTGATAAGGACATCAAAAGAATCAAAGAATTGCCATTACAGCAGGCTTATTGGGATTCACCTCGTAAGAAGAGCTTGTTCCAGAATCGGCCATGGATGTCTACTATGATTTCATATTGTTTTTTTGGTCTTCATGACACAGCATACAGTGAGATATTATCCTTGTGGGCTGTGAGTGATAGAAAATATGGTGGCCTTAGCTTTTCATCTGAGGATATTGGTCAGGTTCTTGCTGTTGCAGGTGCTAGTCTTCTAGCATATCAGCTTATTATTTACCACTGGGTTCATAAGTTTCTTGGACCAATCATTTCATTACGAATTGCTTCTGCTCTATCTATACTTATTCTTTCTACTTATCCTTTTATGACATACCTATCTGGCGCGGAACTTTCCTTAGCTCTTTATTCAGCGGCAATGATGAAAAGTGCTCTTGCAATTACTATAAGCACAGGAATTTGCCTTTTACAGAACAATGCTGTGCTTCAAGAACATAGAGGCACTGCAAATGGTGTATCAACAACAGCTATGTCATTTTTCAAGGCGATTGCTCCAGTAGGGGCAGGTGTTCTATTCTCGTGGGCGCAAAAACGTCAGGATGCCCTCTTCTTTCCAGCTTCAGCAGCCTGGACCCAGGAGCCAGCAGCAAAGCAGCTAGCTGCCTTGGCGTCGGAGCTCACCTTCAAGGAGGAGATACGGCGGGACTAA</cdnaseq>

Protein Sequence

<aaseq>MGSGSEEAAPLLLPVAAATATAEERCPGCVQERRKASRGGRIPYTELFFVAVTTLASSLPITCLFPFLYFMVRDLQVAQTEEDIGYYAGFLGASYMVGRSFAAIFWGVVADRIGRKPVIVFSILSVVIFNTLFGLSTKYWMALTTRFVLGALNGLLAPIKVNTAWGLGLVVGPALGGYLAQPVEKYPHVFSKESVFGRFPYLLPCLGVSLFAAIVLISCIWLPETIHKHKSPDKDIKRIKELPLQQAYWDSPRKKSLFQNRPWMSTMISYCFFGLHDTAYSEILSLWAVSDRKYGGLSFSSEDIGQVLAVAGASLLAYQLIIYHWVHKFLGPIISLRIASALSILILSTYPFMTYLSGAELSLALYSAAMMKSALAITISTGICLLQNNAVLQEHRGTANGVSTTAMSFFKAIAPVGAGVLFSWAQKRQDALFFPASAAWTQEPAAKQLAALASELTFKEEIRRD</aaseq>

Gene Sequence

<dnaseqindica>1..172#1773..1813#2313..2373#2493..2595#2678..2780#3036..3098#3174..3223#3326..3401#3596..3772#3972..4059#4199..4284#4367..4474#4811..4855#4948..5036#5158..5201#6109..6200#ATGGGCAGCGGCAGCGAGGAGGCGGCGCCGCTGCTGCTGCCGGTGGCGGCGGCGACGGCGACGGCGGAGGAGAGGTGCCCGGGGTGCGTGCAGGAGCGGAGGAAGGCGAGCCGCGGAGGGCGGATCCCCTACACGGAGCTCTTCTTCGTCGCCGTTACCACTCTTGCCTCATGTAATCCGTTCATTTCAGCTACTGCATTTTTTTTATATATATACTCCCTCCGTTTCACAATGTAAGTTATTTTAGCATTTTCTACATTTATATTGATGCTAATGAATATAGACATATAAATCTATAATCAATATGAATGTGGAAAATATTAGAATGACTTACATTATGAAAAGGAGGAAGTATAAGCAAATGATTTTACCAGCTGCATTATCCTTGCACTTCTTATTAGTAGTTCTTACATCTTCATCCGTTTCTTAAATCTCTCCTCTTTTCTACTGCATGCGCAACACTGCAATGCACCAACCATATGGTAGCTATATATTGATTACAGTTATCATCGTTGTTAATGTTTCTGTTCATGCATGTTCATCAACGTGAACACATGCATACATTGATACATAGCACTCTTTCCAGTTATAAACACTTAAATTTAAGATAAGACGTGATCAACTTTTAAAATTTTGATCAGATCATCAATAGTTTCTCAAATGCTTAATTTAAAAGAAAAAAAATAGTGTGTGTAAATTTATCTGGAAAGGTACTATTATAAAATCATAAATCTATCAAAAATTTAAAACTTATTCTAACATAAATCTAATGGTTAAAAATCAAAAAATTAACCAAGTCTTATCTTAAACATCCAATATTTATGGCATCATTTGATCATCCTTAGCCACTAGAGAGATGAAGGGGGCATCGATCATGATGAATAAACGGTACTACAAGACGGACAAAAGGCAGGTTGCAAGTTGCAAACTTGGATCTCCTACTCCTAAATAAAAGGAAATAAAAAGTAAACTAGGATGCCCTTCTGGTACTTGACAAAAAGAAAAGCATAACTAGCACCCACCAATACAACCCCAACTTGCTCTCTTCTTGACAAATCTTGATCTACATGCCAAATAAATATATACTAGTAATATATTGCCATATTGATGCATCCTAGGCTAACTATAGTATATAAGACCACATATTTACCTGTTTTGAGATATGCCAAAAACAAGTAAATATATAATGACATGGACCCAATTAACCCTATATATATATATATATATATATATATATATATATATATATATAAGAGGAGAGAGAGGAGAACAAAGGAGAGGATGGAGGAAGAAGACGAGAGAAATTTTGTCCGAAAAATTTAGAATTTGCATTGAAAGGGTATGTAGTGGTACATCTTAAACACATGTTAAATTATAGTGGCGTGGTTCCAATTTCACAAACAGTAATGATATATCACAAAACAGGTAAATATATAATGGCATGATCCAATTAACCCTATATATATAGGAGTACTTGTGGAGCCGCTTGAATTGAAGCTCAAACATGCATGTAAAATTTGTTCAGGATAGCAAGTAGTATCTGTCTATCTGAGATCTGTTCCAGCACTATGCGCCTATGCAATTATGTACTATCAGTATACATATCATATTAATATTGGAGATCAATAGCGTAACTAACCACAAACAGCAGCAGGAGCAAGCACATGCTTTCTTGTCGTGAATAACAGGATTCTTGTGTTTGTTCCCTTCATGCTGCAAGCTGCACATCTCGTTTCTGATTTATTGCTTCCTCTGTCCTTTAAATATTGCAGCTTTACCAATCACGTGCCTCTTCCCCTTCCTCTACTTCATGGTAAGTATGTATTCACTTCTCCATCTAATTATTTCATCATGCGTCTTGAGCTACAGTATCACCTGCGTCGCACAAAGACGTTTACCTAACTTGAAGGACACTGCTTTGCATCATTCCTAATTAATCTCTGAACCCTGGATCATTTCGAATGCATGTCCCAGTTCACACATTTCTCCCTAACCATTATACCTTACCACTTGGTTGCAACTTGGATCTCATGAGATATTCCAACTGTAGCCTTCACCGTTTTGCTTTGTATAGCTGGACTCATTGGTCCTTTGTCTAAAAGAAAAACTCATAGCCTTCCTTGAATTTCTGACACGATTTCAGTTTGTACGTCAAACCATCATCTTCAGATCTATGTAGCATATATAACGGGAGTGCCTGCCCCGTAGTTCTCTTTATCAAGATCTCTACTGGTTCATTCAAGTTGCATCTCAGTGATCCCCTTTTCGCATATTGAATACTCTGGCTTATTCAATCATCTCTGTTTTCATAGGTAAGGGACCTGCAAGTAGCACAAACAGAGGAGGACATTGGGTATTATGCTGGATTTCTTGGTAATTTTTTTTCCAAACCAATTCAAAATATTTATAAAAATGGCTACGGTGACCAGTGAGAAATGTAATTTAAACGTGTGTACGCCGGTACACCTATCCATTGATGTTTTGAAATGAAGGTGCTTCGTACATGGTTGGTAGATCCTTTGCCGCGATATTTTGGGGAGTTGTGGCAGATCGTATAGGAAGGAAACCTGTCATTGTGTTTTCAATATTGTCTGTGTAAGTCAATTCAGTACAGCTACAACAGCATTTCTATCAGTCATTTTAGGGTAGTACTTAGATTTCCATGTGTGTACTGTAGGGTCATATTTAACACATTATTTGGGCTAAGTACAAAGTATTGGATGGCACTTACTACAAGGTTTGTTCTAGGTGCTCTAAATGGTTTACTTGCGCCAATAAAGGTAACTAAAAGTCTTTCAAGTGACAATTTCAGCATGAAGTTGTATGAAATTATTCATGTGCCTAGGAGGGAGCTTTCCTAACATAGTATTTATCAAGCATTACAGGCTTATTCTATTGAAGTTTGCCAAACTGAACATCAAGCTCTTGGACTCTCCATTGTAATGCCAAGCAATTCTCTTGTTTGCCCCCATTGTGTTCCACAATCCTTTCAATATGCACTGCTATAAAGCTGTTATGATTTACTTTGATCATAGGTTAACACAGCATGGGGTTTGGGTCTCGTTGTTGGTCCAGCTCTTGGAGGCTACCTTGCACAGGTACTAATTTCAAAATGGAAAAAGAAGAAAAGAAGCTAATATTCGGTTTCTTACATCGTTCTGCTTCCTTCTCAGCCTGTTGAAAAATATCCACATGTATTTTCTAAGGAGTCAGTTTTTGGGAGGTATGTCATACACTGATACAAGAGCAAGATATAAGCCCAGATTGCTTGTAGTCAGTGTTGTAACTACTAAATACCCATATCTAATTTCATTACATTTTGCAGATTCCCGTATCTCTTACCTTGCCTTGGTGTATCATTGTTTGCTGCTATTGTTCTGATAAGTTGTATTTGGCTTCCGGTACGTAAAGTTTCACTTAGATGCCATTTCCCCAATAATTCTTAAGCGAATTCTAGCACTAAATGCTCGTTACTTAGCCCTTTTCTATGGTCTAGTTAATTTCACAAAACAAAAAAATATTGGATTAATTTTTTTAGAACTGTTTTTCTAGTGTTACTATTAATGTGGTTTTGTTTGAAAAATGTATCTGGCAGGAGACTATACATAAACATAAATCTCCTGATAAGGACATCAAAAGAATCAAAGAATTGCCATTACAGCAGGCTTATTGGGATTCACCTCGTAAGAAGAGCTTGTTCCAGAATCGGCCATGGATGTCTACTATGATTTCATATTGTTTTTTTGGTCTTCATGACACAGCATACAGTGAGGTAAAGAACCATGTTTTCTACGCCTTTGCTTGTTACCAGTCAGAAGGTCACGTTAATCTATCTAGATGCCACTCAGTTTATTTCTCATGCTTCAAAAATTATTATCTACATACTTGCTAAACTATTCACACACAGCTTTGATATTCACATAACTTAAGGGGTTCTAAAAAGATTAATACCATTAGCATATTTATGCTAGATATTATCCTTGTGGGCTGTGAGTGATAGAAAATATGGTGGCCTTAGCTTTTCATCTGAGGATATTGGTCAGGTTCTTGCTGTTGCAGGTATATTGCCATCTTTCCCCCAACATACATAATTTATATATATATTCTGAACTATTCATCAGACTTTAAAGATTCATGTTCTCACATAGCTGCATAAATTTGTTGTTAAATAATTGTACTTCATGTCTCTTCGTTTCAGGTGCTAGTCTTCTAGCATATCAGCTTATTATTTACCACTGGGTTCATAAGTTTCTTGGACCAATCATTTCATTACGAATTGCTTCTGTGAGTAGTCTCCTATCACGACTTCAAAAGAAATATAAATAATCATTTCATGGTCATCACTCATATTTAACTGAAATTGCAGGCTCTATCTATACTTATTCTTTCTACTTATCCTTTTATGACATACCTATCTGGCGCGGAACTTTCCTTAGCTCTTTATTCAGCGGCAATGATGAAAAGTGCTCTTGCAGTAAGCAATTTCAAAGCTCTTCCTTCAAATTTTAAGTATCTACACGTGTATCCAACCACACCATTTGTTAGCTAATAGGTACAGCAGTAATATTTCAAAAGTAATAATGTACAAAAAAGAAGATGTGTTGCACTGCAGAATGCAGATTATGAAAATCTAACTCAGTCTACAATATGACAAATTCAACTGTAACTACTTGGGGAAGACAAGCCTGGGTTATTTCATAGAGTACTATTTTCAGGGATTTAAGAGTAACAACTAAAATAGGGGCTTTATTATACTTCCACTAATATCCAAGTCTTTATCTCTAATGTTTGTTTTGTACAACGTGTGCAGATTACTATAAGCACAGGAATTTGCCTTTTACAGAACAATGCTGTGGTATGCATAAAAATCAAGTGAATGCATGTGTTCTGATACTGTGTTCACGTAAATAAGCTAAATTATTTATTGACTTTGAAATTCAATATCAGCTTCAAGAACATAGAGGCACTGCAAATGGTGTATCAACAACAGCTATGTCATTTTTCAAGGCGATTGCTCCAGTAGGGGCAGGTGTTCTGTGAGTACCACCTCTTAACACTTTTCTCATAAATACAATTAATGATCGAGACATAATGTTTCTTAAATGATTGAGATAAATGATTTAGATTTTAGTGATCAATACTCAATTTTCAATTCAGATTCTCGTGGGCGCAAAAACGTCAGGATGCCCTCTTCTTTCCAGGTGAGCTATTTATCTGAACTGCACTGCGCTATACGCCTATATCTTGCCTCGTCTTTTAATTAGCCAGGTTGGCCGAAAGAACACCCCTTCCCTCCCTTGTCTTTCAATTTGTTTGGCCTAGTAAACTACCATATCTTTCAGTCGACCATACATTACATACCCTTGTCCTATCTTATTTCGTTAACAAGGGGTTTGCCTGGACTAATTGTACTAAAAGAACATGTAATCAGGAAAAAGAAAAAAGGAAAAGCTTATCCAGTTTGGCTTTCTTGAAACCTGTAGGTGATCAAGTGGTGTTCTTGATGCTGAACTTTGTGGAGCTCATTGGACTCATATTTACTTTTGAGCCTTTTATGGTGTTACCTGCGGCATCAGATGAGTGTAGTTAGCCAAGTGCAGAGGAATTGTTTCTTATCAATAATAAATTTGAAACAGTAATAATACTTAACACTTGCTAATGGGCTGAGTAATGAGGCATAGCTTAAGTATGTGGCATGCTTGTCTGCTCACAGAAATGGAAGTCCTTGAATGATGAATCTGGCTGCAGTCAGCATGACATGTCCAATTTTGTCATCATGGTGTATTAGTTGCATCTTGTCACAATGATTACTTTTTAAACAGAACAACATTTTAAGGTAGTTCATGTTCTCAGATGTCAACATTTCCCCTTTTTGAGGTCACTACTCCTACTTGACTAGGCTGACAGCTTAGTAGTTGACAGTTAAGTTTAGCCTGAAGGAACTGAAGACAAGAAGAAATCAGGCGGGTAATGATGAGACTGATTGATTAGACAATGGGAGGTTAACTCATCATAATGCTTACGCACCTCTGTCAAAACTCAAAAGCCAGTCATCATCATCTTCGGATTGCATCGCCGCTGCCGGGGCCATGACGGTGTTCTGTTCAGCTTCAGCAGCCTGGACCCAGGAGCCAGCAGCAAAGCAGCTAGCTGCCTTGGCGTCGGAGCTCACCTTCAAGGAGGAGATACGGCGGGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036675

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036675&oldid=52980"