BGIOSGA036678

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Revision as of 08:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036678| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036678, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA036678

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036678, complete gene.

LocusTag

OS12G0132400

Ensembl Transcript ID

BGIOSGA036678-TA

Ensembl Protein ID

BGIOSGA036678-PA

Length

3999

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1893140..1897138

Sequence Coding Region

1897094..1897138,1896605..1896711),complement(1896424..1896502,1895975..1896148),complement(1895756..1895854
,1894931..1895099),complement(1894708..1894778,1894446..1894585),complement(1894289..1894361
,1893684..1893796),complement(1893444..1893561,1893140..1893271

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1893140..1897138 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1893140..1897138 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCGCAAGATCAAAGTCAAGAAGAAGAAGGCATCGAGCAAGGTATGGCAACCTGGTGTGGATACACTGGAAGAAGGGGAGGAGCTCCAGTTCGATCCTCAGGCTTACAATTATCTCAGAGGGTTTAACATTGGCTGGCCGTGCTTGAGTTTCGATGTTGTGCGGGATCAACTTGGGCTCGTGCGATCGGAATTCCCACATACATTATATGGCGTTGCTGGAACTCAGGCTGAGAGGGCTTCATGGAATTATATAGGCATTTTCAAGATTTGCAACATAAATGGGAAGAAGCGGGAACCTATACCAGCATCAGCAATTGATGGCGACAGTGATATGGATAGTGAAAGTAGTAGTGATGAAGAAGATGAAGCAGCTAATGAAGACACAATGCCCATTTTACATTTAAAAAAGGTGGCTCATGCGGGGTGTGTAAATCGTATTCGCTCTATGAATCAGGAACCACATATATGTGCAACATGGGGAGACACAGGTCATGTTCAGGTGTGGGACTTCAGCTCCTTCCTTAATTCATTAGCAGAGTCTGGAGCAGTTGCACACAACGAAGACGACAGAATCCATAATCACGTACCTGTGAAAATATTTGGTGGCCATAAAGATGAAGGCTATGCAATTGATTGGAGTCCGCTTGTTACTGGAAGACTTGTTTCTGGTGATTGCAATAAATGCATCCACCTCTGGGAGCCAACTTCAAACAGTTGGAATGTCGATACAAATCCATTTTGGAGTCCCACAGAAGCCGACATATTTGCCTCTTGTTCAGCCGACAGAACAATATCTATCTGGGATATACGGACAGGGAAGAAACCTTGTATTTCTGTTAGGGCTCACAATGCTGACGTGAATGTCATCTCATGGAACCGGCTCGCTAGCTGTATGATAGCTTCAGGATGCGATGATGGAAGTTTCTCAATTCGTGATCTTAGATTAATCAAGGATGACTCCTTGGTCGCCCATTTTGAATACCACAAGCACCCGATTACATCTGTGGAATGGAGCCCACATGAACCGTCAACACTAGCTGTATCATCAGCTGACCATCAACTGACAATTTGGGATCTTTCATTGGAAAAAGATGCTGAAGAGGAGGCAGAGTTCAGGGCAAGGATGAGAGAACAGGCTGATGCCCCTGAAGATTTACCCCCACAACTTCTCTTTGTTCATCAGGGCCAGAAAGACTTGAAAGAATTGCACTGGCATCCACAGATACCTAGTATGATCATATCTACGGCAGCTGATGGATTCAATATGTTGATGCCCAGCAACATCGATACAACCATTCGAGAAGCTGACGCATAG</cdnaseq>

Protein Sequence

<aaseq>MGRKIKVKKKKASSKVWQPGVDTLEEGEELQFDPQAYNYLRGFNIGWPCLSFDVVRDQLGLVRSEFPHTLYGVAGTQAERASWNYIGIFKICNINGKKREPIPASAIDGDSDMDSESSSDEEDEAANEDTMPILHLKKVAHAGCVNRIRSMNQEPHICATWGDTGHVQVWDFSSFLNSLAESGAVAHNEDDRIHNHVPVKIFGGHKDEGYAIDWSPLVTGRLVSGDCNKCIHLWEPTSNSWNVDTNPFWSPTEADIFASCSADRTISIWDIRTGKKPCISVRAHNADVNVISWNRLASCMIASGCDDGSFSIRDLRLIKDDSLVAHFEYHKHPITSVEWSPHEPSTLAVSSADHQLTIWDLSLEKDAEEEAEFRARMREQADAPEDLPPQLLFVHQGQKDLKELHWHPQIPSMIISTAADGFNMLMPSNIDTTIREADA</aaseq>

Gene Sequence

<dnaseqindica>1..45#428..534#637..715#991..1164#1285..1383#2040..2208#2361..2431#2554..2693#2778..2850#3343..3455#3578..3695#3868..3999#ATGGGTCGCAAGATCAAAGTCAAGAAGAAGAAGGCATCGAGCAAGGTGAGCGATTGGTGCTGACTGTCTCGCGATATTTTATTTTATTTTATTTTATTTTCATCATGGTTTAATTCGAGCCTAACTCTGCCTCTACTCTTTCTTCAATCTTTATCGGTGGGTGGATTGAAGAAAGCCGAAGCTTCATCGTCTAGGGTGCCTTCTTGCCCAGCCAAGGTGAGAGGGCAAATACATGCCAATTATTACAAGCAGATGCACACATATTTTTCTTTTCTTTTATTTTTTTTGGTAGTTGCAGTGAGAGGAAAAGGTTCGATGTGTGATTATTTTTTTTTTCTCCTATAGTTTTAATTTCCTAAGCTAAGGCAAATTGCTCCTGTCACTGCTCTTCGAATGAAACACTGACCCGATTGGTATTTCTTTTCAGGTATGGCAACCTGGTGTGGATACACTGGAAGAAGGGGAGGAGCTCCAGTTCGATCCTCAGGCTTACAATTATCTCAGAGGGTTTAACATTGGCTGGCCGTGCTTGAGGTAAAAGTTCACCATGGCAGCCATTGCGCGCTCCTTATCCAAGGCCAATATGCGCATCATTGTATGGGTTATTTATCCTCATCGATTTGTTATCTGTTGCAGTTTCGATGTTGTGCGGGATCAACTTGGGCTCGTGCGATCGGAATTCCCACATACATTATATGGCGTTGCTGGAACTCAGGTTGCATTCTCTCTATAATGCTTTCCTTCAAAATTTACATGATGAATATACATATATTTTCCTATTTTGATTAATGAATTCTGTCAACAACAAAATTAGGATTCCAGTTCGTTTCCATGTCAACTGTGCTCTGTCATGATTCATGGGTGCATTTGACTTTTTTTTTTCCTAGTAACATTCCTTTTCAATCAGTGGTTTTGCCTGCTCCTGAATTGATGGAATCAATCTTTTGTCAACATAGTTTGTGTAATTATGAGTGGTGCCTGTGTTTTCAGGCTGAGAGGGCTTCATGGAATTATATAGGCATTTTCAAGATTTGCAACATAAATGGGAAGAAGCGGGAACCTATACCAGCATCAGCAATTGATGGCGACAGTGATATGGATAGTGAAAGTAGTAGTGATGAAGAAGATGAAGCAGCTAATGAAGACACAATGCCCATTTTACATGTAAGTTCTTTCTCCAAGTGCACAGCTGTGAATTTAACTATGAATTTTACTTGTTTTGCATCCCAGTTTGCTCATTTGTTACATTACTCTAACATGCTTTGTGTCTGTATGCATGTACAGTTAAAAAAGGTGGCTCATGCGGGGTGTGTAAATCGTATTCGCTCTATGAATCAGGAACCACATATATGTGCAACATGGGGAGACACAGGTCATGTTCAGGTATTTTACTTTGTCTTGCAATACTCCTTTTTTTTTACTCTTTTTGATCAAACAAGTCTATTTTTGGTCCCTGAGTTCTTTGCGAGGTCTGAATTCCCCTTAAACTTAATACGGATACCATTAATTGGCATGCTCCCATTGTCATACAAAATCAGAAAAACCCCTGCGTTCAATCTATCTGGTTTTGAGTAGGATCTAGCTTTGCAGTCAGCTTGGCACTGGGCTCATGTAATGATGACCAAAAAAGGATTGTTCGTCCTCCTAGTCACCCATCCACTGCACTGCTGCTACCTTCTGTACATAACCACTGAACACCCCTGAATCAAGTTAGCGGATATTAGCATGCCATGTTAGACAAAACTAGGTATAAGATATTATGATTATTCTGTACAGGTTTTGATTTTTGATAGCCGAGGCACTGAAAGTAAATTGTATCAACGTTTAGAGTGGACTTGTGAGGTAGTCGAGGGATGAAAGCCCTGTTGTTTAGTGGTGGTTCCACTCAATCTGTACATTGGTACCATGTCCTGTTTTCGATGAACATGACATATTGTTATCTATTATATTGCACCCTGAAAACATGCCCAGGAATAGAATCTACCATACCTGCTACTTTGTGCATAATCAAACTGTCTGTTATGTTGCTGCATTTGTAGGTGTGGGACTTCAGCTCCTTCCTTAATTCATTAGCAGAGTCTGGAGCAGTTGCACACAACGAAGACGACAGAATCCATAATCACGTACCTGTGAAAATATTTGGTGGCCATAAAGATGAAGGCTATGCAATTGATTGGAGTCCGCTTGTTACTGGAAGACTTGTTTCTGGTGTGTGATCTTGTCCATGCTATATTTGTTTGTCACGTCCTATGCTGTTTTGCTTAGAAAACCGTGGCCTGTCCTGTGTTAATAGAACATCCATATGCTTTCATTTCGTACATGGGCATTGAGTATATCAATTTAATGATTTGCCTATGCAGGTGATTGCAATAAATGCATCCACCTCTGGGAGCCAACTTCAAACAGTTGGAATGTCGATACAAATCCATTTGTAGGACACACTGCAAGTGTTGAAGATTTGCAGGCATGCCACTGAAAGCATATATACTTCTTGGTGCTCTCTAGAGCACTGAACGTTTGATTATCTCAAACATCTTGACTATATTTTTGCAGTGGAGTCCCACAGAAGCCGACATATTTGCCTCTTGTTCAGCCGACAGAACAATATCTATCTGGGATATACGGACAGGGAAGAAACCTTGTATTTCTGTTAGGGCTCACAATGCTGACGTGAATGTCATCTCATGGAACCGGTATGATATGTTCACTTGAAAATTCGATTATCTTCATAAAAAATTCTTCTAATATTTCATGAATATACTGACTACCATTACCAGGCTCGCTAGCTGTATGATAGCTTCAGGATGCGATGATGGAAGTTTCTCAATTCGTGATCTTAGATTAATCAAGGTACTTCATATTGTTAAGCCACACTGTTCTGTGCTTGTCAGTTGCAAATAGCACACTGAAATGGCATATTCCCTCCATTGCTGTTTTTATGGTTTATTTTCAGTTTGGATTTCTGTCTATGCATTTAATATTTTGGAAGGAAAATGTGGGGTATTGGGTCTTTTGATAGTAATATTGATACAAGATGATTGAACCATTTCATGGATGAATGATATTTTGCATTTTCTTGCTACTAGATTTGTCAAGCCAGAGACGCTATGGTAGATAATTTGTTGCTTCTGATGTCTATATTTAATATGCAGACTCCTGTAGAATACACGCTCTTGTGCAAAAATCAGTGCAGCTAGATAGTTAAACGATAATGTTAATTCTTTGTTATTTGAACACCTTTTACAACTATAATAATTTCTTCTGTTCATATAGTCTCATCTTGCTGTTGAACGACGGTATTCACATCAAAATCATATCTTTTGTTTTATTTTCTACTTCTAGGATGACTCCTTGGTCGCCCATTTTGAATACCACAAGCACCCGATTACATCTGTGGAATGGAGCCCACATGAACCGTCAACACTAGCTGTATCATCAGCTGACCATCAACTGACGTAAGTCTCCTCACTCCAAGTTTTATACCTTATGTTTAAAGTGTGCTGAAATGCCCCAAAAAGAATGCTTTCTTTACTATTTTCTGACTTGCATTTTTCAATCCTGAATTGTTTGTGTACAGAATTTGGGATCTTTCATTGGAAAAAGATGCTGAAGAGGAGGCAGAGTTCAGGGCAAGGATGAGAGAACAGGCTGATGCCCCTGAAGATTTACCCCCACAACTTCTCTTTGTTCATCAGGTACTGTTACCACACTTGTTTTATGTTTACTTCCTCTCATTTTCATATCATTGTGTTCACCATTCCTTGTGTAATTAAAATACATGTTTGTGGACCTCGAGATGTATTTCAAAAGTACAGACACTGTTACTGAGTGAAATCATAAATGTGATGTTGATTGTTTTATGTGCAGGGCCAGAAAGACTTGAAAGAATTGCACTGGCATCCACAGATACCTAGTATGATCATATCTACGGCAGCTGATGGATTCAATATGTTGATGCCCAGCAACATCGATACAACCATTCGAGAAGCTGACGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036678