BGIOSGA036693

From RiceWiki
Revision as of 08:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036693| Description = cDNA, clone: J065154E06, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA036693, complete gene.| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036693

Description

cDNA, clone: J065154E06, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA036693, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036693-TA

Ensembl Protein ID

BGIOSGA036693-PA

Length

3884

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1743091..1746974

Sequence Coding Region

1746917..1746974,1746768..1746823),complement(1746504..1746668,1746189..1746303),complement(1745930..1746029
,1745622..1745806),complement(1745400..1745456,1745225..1745312),complement(1745074..1745149
,1744288..1744387),complement(1744132..1744183,1743547..1743684),complement(1743208..1743275
,1743091..1743119

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1743091..1746974 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1743091..1746974 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGAGCTTCCCTCCGCCCGGCGGCGTCACCGTCTGCGAGATCAACCGTGACCTCGTTGTGGCGGATGCGCTGTCCGATGATCGAGCCAAGGATGCCTACGGGGATGTCCTCGGAATGGTCTTCAGCCCGATTCCTTTCCAGCCGGATGCGACTGTTGCCACCCACGAGCCTCCTGCTGTCACTGAAGCTGCTGAGCCTGCTGAAGTTGTCCCCAGAACAAGTTTAGCTTCCACCATAGCTGAGTCCTTCAAACAAATGCTCTTCCCTTCGTGCGATCCAAATCTGCTACAAGAAATTGATACCCAGAAAGTAAGTTGGAATCCTCACAAGCATTGCTTGGCATTTGTATCTGGGAAGAACCAAGTTACAGTTCATGACTTTGAGGAGCCAGATAATAAAGAATCCTACATTCTAACAAGTGACCATCAAAAGGATGTTAAAGCTGTTGAATGGAGGCCAAATAGTGGAAAGGTGATTGCAGTTGGGTGCAAGGGAGGGATATGCCTCTGGTCAGCATCATATCCTGGCAATGTTGCATCTGTGAAATCTGGTGTCACCTCTTCTTCTTTTGGTGCCTTTCCTAGAGGTTCCGGTGGTCAATGGATACTCGTGGACATTCTCCGTGGTTCTTCTGCTGAGCTAGTTAGCGCACTTTGTTGGAAACCTGATGGAAGATACTTGGTATCTGCCTCTTGTAATAGCCCATCATTCACAATTTGGGATGTTTCTCAAGGGTTGGGAACGCCTATAAGACGTGGATTAAGTAGTATATCATTAGTGCGGTGGTCACCTAGTGGAGATTACCTTTTAACTGCTAAGCTTGATGGAACTTTTCACTTATGGGAAACAAATACATGGACGTCAGAACCATGGTCTTCATCTAATGGATATGTGTCTGGAGCAAATTGGGACCCAGAAGGCCGTACTGCATTATTATCCTTTTCTAACTCAACAACACTGGGCTCAATTCACTTCTCATCAAAGCCACCATCTTTAGATGCCCATCTCCTACCAGTCGAACTACCTGAAATTTCCTCTCTGATTGTCAGCCGAGGCATAGATAAATTAGCATGGGATTCTTCAGGAGAGCGCTTGGCATTATCATTCAAAGATGGTAATGAAATGTATCATGGCCTTGTTGCTGTCTATGATGTGAGGAGATCTCCACTTGTCTCAGTTTCACTAGTTGCTGGAGCAGTGGCTGGTGTTGTACATATCCCCTCATACTTCGTCCTCATTGACTCCCTAAGAGGAGTAAGGAAAGCTCGCTGGGTCAAGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MPSFPPPGGVTVCEINRDLVVADALSDDRAKDAYGDVLGMVFSPIPFQPDATVATHEPPAVTEAAEPAEVVPRTSLASTIAESFKQMLFPSCDPNLLQEIDTQKVSWNPHKHCLAFVSGKNQVTVHDFEEPDNKESYILTSDHQKDVKAVEWRPNSGKVIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGSGGQWILVDILRGSSAELVSALCWKPDGRYLVSASCNSPSFTIWDVSQGLGTPIRRGLSSISLVRWSPSGDYLLTAKLDGTFHLWETNTWTSEPWSSSNGYVSGANWDPEGRTALLSFSNSTTLGSIHFSSKPPSLDAHLLPVELPEISSLIVSRGIDKLAWDSSGERLALSFKDGNEMYHGLVAVYDVRRSPLVSVSLVAGAVAGVVHIPSYFVLIDSLRGVRKARWVKR</aaseq>

Gene Sequence

<dnaseqindica>1..58#152..207#307..471#672..786#946..1045#1169..1353#1519..1575#1663..1750#1826..1901#2588..2687#2792..2843#3291..3428#3700..3767#3856..3884#ATGCCGAGCTTCCCTCCGCCCGGCGGCGTCACCGTCTGCGAGATCAACCGTGACCTCGGTATGGTATCCCTCCACCTCCTTGCTTTCTCCACCCCGATCTCCTCTCCTCCTTGTTTTCTCTCAATCGTCTGTCCAAATCTGTGCGTTGCAGTTGTGGCGGATGCGCTGTCCGATGATCGAGCCAAGGATGCCTACGGGGATGTCCTCGTCAGTACACTCTCCTCCCCCTCGCAATAATTTCTTTTTCTTTTTCACAACACTAATTTTATTAGGCCTCTAATTGAAACTTCAATTTGGGGTTTCCAGGGAATGGTCTTCAGCCCGATTCCTTTCCAGCCGGATGCGACTGTTGCCACCCACGAGCCTCCTGCTGTCACTGAAGCTGCTGAGCCTGCTGAAGTTGTCCCCAGAACAAGTTTAGCTTCCACCATAGCTGAGTCCTTCAAACAAATGCTCTTCCCTTCGTGCGATGTGAGTTTGGTTCTTCATCATATCTTAGTGAATCAATTGCTTGCATTCATGATTTTACTGCTTTTCTGTCATATATTGCCCCATTCTCGTTGTTCACCCAAAATCTACACACAAGCTTATTTTTGTGTGCAAAGTGCTCAGGATAGATTTTTTTTAACAACTGTACTTTAGTACTTACGACAAATCTTTTGTTTTCGCAGCCAAATCTGCTACAAGAAATTGATACCCAGAAAGTAAGTTGGAATCCTCACAAGCATTGCTTGGCATTTGTATCTGGGAAGAACCAAGTTACAGTTCATGACTTTGAGGAGCCAGGTGAGATCTGCTGAACTTTCTTATGTTGTATTAATAAGATAGATATGATGAACTGAAGCATGATGGCTATATGAACATTTATTCTTGTATTTAATGAACTGAAGTATGTTTCTCAACTCAGCTGAAGCCAACAACTAATCATTTGTATTCTCTGAACAGATAATAAAGAATCCTACATTCTAACAAGTGACCATCAAAAGGATGTTAAAGCTGTTGAATGGAGGCCAAATAGTGGAAAGGTGATTGCAGTTGGGTGCAAGTATGTCCTACTGCCGCCATATACTAGAGCACTATTAAAGATTTGTTTTGATATTCTTTTCATGTCATAATACCTGGTGGCACAATCTACTATTAGATTAACTTTTATTATTATTATTTTCAGGGGAGGGATATGCCTCTGGTCAGCATCATATCCTGGCAATGTTGCATCTGTGAAATCTGGTGTCACCTCTTCTTCTTTTGGTGCCTTTCCTAGAGGTTCCGGTGGTCAATGGATACTCGTGGACATTCTCCGTGGTTCTTCTGCTGAGCTAGTTAGCGCACTTTGTTGGAAACCTGATGGAAGATATCCTTTATAAGTTTTCAGTATAGCATTTAATCATAAGTATCATTCATCTCTTTTATTTGAAAAATAAAAAAAAATGTAACCTAAAACAAATAATATGTCTTCACTTGCAAACAGAAAAAATATCAGTGACTCTAGACAATATTCCTTGACATATATCTCCACATACTTGGTATCTGCCTCTTGTAATAGCCCATCATTCACAATTTGGGATGTTTCTCAAGGTATCTAAATGTCATCAGAATGCAGATACCCAATTCCATCTTACACAGAACTGCATGCTAATATCTTTAGATTTTCTTCTGCTTCAGGGTTGGGAACGCCTATAAGACGTGGATTAAGTAGTATATCATTAGTGCGGTGGTCACCTAGTGGAGATTACCTTTTAACTGCTAAGCTGTATGAACTTCAACTTTAGTTATTTTCATTGCTCATACCTTTTGAAGATTTATATAGTTTTCCTTTTTTAATTAGTGATGGAACTTTTCACTTATGGGAAACAAATACATGGACGTCAGAACCATGGTCTTCATCTAATGGATATGTGTCTGTAAGTAGTAGTATCTTCACTCTTTAAATAAGTATTGTTTAACATTCAACATTATTGTTTACCATGTTGCAAGGAATGGATTCTTAATTAAGTCATGAAATGAAAGGGCAAATGCTTTGCATGTTATGGGTTATTGGGTCCAGTTTTAACTCAAGAATTGTTATCTCAGACCCATTTCAAAATTGTATATGTAACTTTCTTTCTGATTTTGTACATGTATTTATCTTGAAAACAAGTGTGTTTAGCATGATTCTGAAGATTGATACAACATATTAACTTATATAACCAGTTGTTTTAAGATATATACATTTTAAACTTGCCTGTATCAAGCTTCTAAACTTGGGTTTATTTTGTATTTATGACTACCTTGCAGTACTTTTTTACTTGTTAATGTATTGTCATTTCAACAGCTATACTTTTGTTTGCCAACAAGATCAATTGCTTGTTCAAAAGTTGATTTTTGGTTCAGTTGACTTTATTAATTGTAAATATTACATAAAGCTCAACTTAATTTGAACCTTCCCAAGTATATCACATAAGATCAGTTTTACAGCAAACATATCTCATTCACTTGTAATATATACATCCCCCCCCCCCCTTAAAGCAGTATTTTGAATGAAATATGGGTGTTGTGATTAATTTTGGAGTTATGATGCCTTTTTTTTTTAATCTTGCTTTCATACCAGGGAGCAAATTGGGACCCAGAAGGCCGTACTGCATTATTATCCTTTTCTAACTCAACAACACTGGGCTCAATTCACTTCTCATCAAAGCCACCATCTTTAGGTATGGACAGCTACCCTCATCTCACCACAGCATTTTTATGTGAAGTTACAGTATTATGTTTATTGTCTGAATCCTGAACATTGTGTTGTGTTCATTGACTTCAGATGCCCATCTCCTACCAGTCGAACTACCTGAAATTTCCTCTCTGATTGTCAGGTAACAACAGTGGCAGTACCTACCATTCTATACTCCTAACTTCTTGTGGACCCGATGGAACATATTTTACTGCTGTCTTCAATGCTAACTTTAACTGATGATATTTTGAATAACCACATCTGCATCTGGTTGGGAAGTCATTCATGATATGGATTGTATGGTTTTAAATAAATCACTTATGGTATGTAACTTAGGATCATTAGCAAGTAAAGGCAAGTTCTCCCTAATCAATTGAAGCGCCTCAACCATTTTTTTTTTTCAAAATATCTTTAGATCTGGCTTGTAAAAAGTCTGTCTCTTGCCATTTTAGTATATACTCAGATGCTTTCATTTAGGATGAACCTTTACATGCTCAAAAGTCTATCATTTCATCCATTACAGCCTAGAAAAGTAACTTGTTGTCCAGTCCATATACTTATTTATGCTAGCTTTCTCTGGTTCATCTAGCCGAGGCATAGATAAATTAGCATGGGATTCTTCAGGAGAGCGCTTGGCATTATCATTCAAAGATGGTAATGAAATGTATCATGGCCTTGTTGCTGTCTATGATGTGAGGAGATCTCCACTTGTCTCAGTTTCACTAGTGTAAGTGCAGTCCTTTAATTTACCATGTTATCTTGGTCATGAACATTGAATCTTGATAATTTTGGACCATTGTCTGACGAATTTCCAATGTGCATATACAGTGGATTCATAAGAGGACCTGGAGATGGAGCAAAGCCACTTGCATTTGCCTTCCATAGCAAATTTAAGCAAGGACCATTGCTTTCTGTGGTATGAGATCATCAAAAGTTTTGAGCCTATTAGTTAAATGATAATTATGGTTGCTCACATTGTTATTCAACTGTTCATGCAGTGCTGGAGCAGTGGCTGGTGTTGTACATATCCCCTCATACTTCGTCCTCATTGACTCCCTAAGAGGAGGTAAATCTCTTTGGCTGCCTGAAAGTCATTTACTTTGGTGGCACGATATCAGCGATGTTTCTTAATTGAATTTCCTTTTTTCGTCCAGTAAGGAAAGCTCGCTGGGTCAAGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036693

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036693&oldid=52998"