BGIOSGA036722

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Revision as of 08:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036722| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036722, complete gene.| tag = OsI_373...")
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Gene Name

BGIOSGA036722

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036722, complete gene.

LocusTag

OsI_37303

Ensembl Transcript ID

BGIOSGA036722-TA

Ensembl Protein ID

BGIOSGA036722-PA

Length

2513

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1404525..1407037

Sequence Coding Region

1406637..1407037,1406408..1406572),complement(1406048..1406288,1405563..1405683),complement(1405305..1405458
,1404678..1404865),complement(1404525..1404547

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1404525..1407037 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1404525..1407037 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCCTATGAGGCCACCAAGGTGGTTTTTGCCCGGTTGCAAGCGCTTGAGCCCAATCTTGCTCCAAACATCATTGGCATGCTCCTCACCAAGGATAACAATGAGATGGACATGATTCGTCTCGCATGTGGCCCTGACAACCTCCTCCAATCTATCATTGCCAAGGTGCGCACCGACCTCACAAACAAGCCTTCCCCTCCTATGGCCTCCTGGGGCTTCCCGTCCGATATAGGTGAGGAAGCATCTTTCTCCGTTGACAAGGTGGGGTGTGATGGAGGTGAAGAGTTCTCCTCTAAGGAGTATGATTGGAGGTTACCCATCGGTGGCAATCACCATCGGAGCTTTTTGTCAAGCACCGTCGACACCCTTGGGTGGAAGCCATGTCTATACTCCCAAAGCGGAGTGACCACCCATCTTGGTAGCGACGACATGCAAGAGTACTCTTCTCGACCACCTCAGATAGACCAAAGTGACCTAACCAACAACTGCAGTGCACGACAGATCTACTTGACCTTCCCGCCTGATTCCATTTTTAGCAAAGAGGACGTCTGCAACTACTTTAGCATGTATGGGATGGTGCAAGATGTGCGTATCCCATACCAGGAGAAGTGCATGTTTGGTTTCGTCACCTTCGCCTACCAAAAGACAGTGAAGCTAATTCTTGCCAAGGGCAACCCACATTACATCTGTGATGCACGTGTTCTTGTCAAGCCATACAAGGAGAAGGACAAGGTCCCCAACAAGTTCAGGCATGTTAATCATTGCCTAATTCCACTTCGTATTTTTGCACATATATTACCTTTTGATTGGGGCCATCATCTCAGCTCTCCCATGGGTTCACATGTGCTTCTAGGACAAGTTGATAACAAATATAATATTAATGAGAATGACAATCCCACTCATTTGGAGGATGTCACATTTCGAGACAATAAGCTGAAGAATGAGTTTGCTATGAGGGAAATTGCCTCTACTGCAATCTCCACAGCAGCCAAGCGCACGGTCATCTCTACGGAAGAGGGGAAGAGAGAATATGGTCCCAAGGCAGCAACACCTAATGATGCTTGTGGATTCCTGGAAAGTGGAATGGAGTACAATTTGCCTCATAGCCCCTTCTCATCTCCCACCAAGGCTTCCAATGTTGCAGCAACAGCTCACACTAGTAACATCAGCAGCAGTAGTAGCCCTCATAAGGTGGCCTCATCTCTATTCCTCCCAACATGCACCCTTGAGCTGCCCCCTACAACTCATGCTTCCTTCAAGCGCCAAGATTCTCCCCTTGCTGAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTDLTNKPSPPMASWGFPSDIGEEASFSVDKVGCDGGEEFSSKEYDWRLPIGGNHHRSFLSSTVDTLGWKPCLYSQSGVTTHLGSDDMQEYSSRPPQIDQSDLTNNCSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLILAKGNPHYICDARVLVKPYKEKDKVPNKFRHVNHCLIPLRIFAHILPFDWGHHLSSPMGSHVLLGQVDNKYNINENDNPTHLEDVTFRDNKLKNEFAMREIASTAISTAAKRTVISTEEGKREYGPKAATPNDACGFLESGMEYNLPHSPFSSPTKASNVAATAHTSNISSSSSPHKVASSLFLPTCTLELPPTTHASFKRQDSPLAEE</aaseq>

Gene Sequence

<dnaseqindica>1..401#466..630#750..990#1355..1475#1580..1733#2173..2360#2491..2513#ATGGGCGCCTATGAGGCCACCAAGGTGGTTTTTGCCCGGTTGCAAGCGCTTGAGCCCAATCTTGCTCCAAACATCATTGGCATGCTCCTCACCAAGGATAACAATGAGATGGACATGATTCGTCTCGCATGTGGCCCTGACAACCTCCTCCAATCTATCATTGCCAAGGTGCGCACCGACCTCACAAACAAGCCTTCCCCTCCTATGGCCTCCTGGGGCTTCCCGTCCGATATAGGTGAGGAAGCATCTTTCTCCGTTGACAAGGTGGGGTGTGATGGAGGTGAAGAGTTCTCCTCTAAGGAGTATGATTGGAGGTTACCCATCGGTGGCAATCACCATCGGAGCTTTTTGTCAAGCACCGTCGACACCCTTGGGTGGAAGCCATGTCTATACTCCCAAAGGTTCCATCTTCAACCCTATAATATCACATTTCTTAGATCCACACACTAATCTCTATTGTACCAGCGGAGTGACCACCCATCTTGGTAGCGACGACATGCAAGAGTACTCTTCTCGACCACCTCAGATAGACCAAAGTGACCTAACCAACAACTGCAGTGCACGACAGATCTACTTGACCTTCCCGCCTGATTCCATTTTTAGCAAAGAGGACGTCTGCAACTACTTTAGGTATCACATGTTCCACCATAGTGCCCCTATTGATGTGTCTTGTTTCAATATTGGAGCATTTCATAATTTAATGAATGCAATCTGTTTTGGCTTGGTTTGTGTCATGTGGGGACAACCAGCATGTATGGGATGGTGCAAGATGTGCGTATCCCATACCAGGAGAAGTGCATGTTTGGTTTCGTCACCTTCGCCTACCAAAAGACAGTGAAGCTAATTCTTGCCAAGGGCAACCCACATTACATCTGTGATGCACGTGTTCTTGTCAAGCCATACAAGGAGAAGGACAAGGTCCCCAACAAGTTCAGGCATGTTAATCATTGCCTAATTCCACTTCGTATTTTTGCACATATATTACCTTTTGTGAGTACTTCTATTGATTTTCTTAAAAATTGCATAAAGTCTATTGATTTTATTAAAATTGCAGAAAGTTTCAGCAAAGTGACTCTTCTAGCTACATGAATCACAATAGATTGCTTTATTCTAGGGGGCCCTTTGACCTGCGACGACACCAAATAGGTGAACAGTGATATCTATGTGGTGCTTGTGTTTTGATCTCTTTTTTTTAACAATTTACAAGGAGTGTTACATTGTGTTAGGGCCGAGAATTTTGTATAGGGACATTGCTAGTCATGAGGCATCTTTTAGGATGAAGCAAGATGAACAACAACATGCGACCGAGCTGCAACGCTGTTGCTTAATGAGGCTTCCGCTTCTCAATCTTCAGGATTGGGGCCATCATCTCAGCTCTCCCATGGGTTCACATGTGCTTCTAGGACAAGTTGATAACAAATATAATATTAATGAGAATGACAATCCCACTCATTTGGAGGATGTCACATTTCGAGGTCTAGTTCTTGGTCGTTGTAATGTCTTGTCTATTAATTATGTTTTTTCGGAAAGTTTATTAATTATGTTGTACTAAGGTTGTGACTTCTTGTTTTATTTATAGACAATAAGCTGAAGAATGAGTTTGCTATGAGGGAAATTGCCTCTACTGCAATCTCCACAGCAGCCAAGCGCACGGTCATCTCTACGGAAGAGGGGAAGAGAGAATATGGTCCCAAGGCAGCAACACCTAATGATGCTTGTGGATTCCTGGAAAGGTAAGATGATGATAGAAAAAGGTTTGCTAGATGGACACTAAAACGTAGGATATTTATTTTGGAAAAAGGACAGAATATACCATTAAACTTGTTACCTCTTTTATTTGCTATATTTTTCCTTTTTTTTCACATGTATGTTATATAATTCTCTCTGACTTAAACAATTCTTGCTTTAGAAGCAAATACAAAAGAAGATAAGGAGTAGACAATTAATAATGTTGATCAAATGTTTTTCTTGATTAGAAGGAACCAATGGGAAAAGAAATGCAAAGGCGAGGATAGGATAAAGCAGTTAAGAAACTAATTAGCACAATAAATGCCTATTATTAAGTAGTTTTTGTGCAAGTCATGCTAGTTGCCGAAGGACTTTCTGGTATTGATATGTTTGTTGATGTTTGTTTTTCTGGTATTGACATGTTTGTTGATGTTTGTTTTGTAGTGGAATGGAGTACAATTTGCCTCATAGCCCCTTCTCATCTCCCACCAAGGCTTCCAATGTTGCAGCAACAGCTCACACTAGTAACATCAGCAGCAGTAGTAGCCCTCATAAGGTGGCCTCATCTCTATTCCTCCCAACATGCACCCTTGAGCTGCCCCCTACAACTCATGCTTCCTTCAAGCGCCAAGGTAAAATCCCAAACCAAATCTCTTCCCTAAATCACTGTACATTTGCAATTCCATGTTAGCATGTAATTCCATGTTGCATTTGCAATTACTGCAGTTATATAAGATAGACTATTTTGTTGTATGTCTTCAGATTCTCCCCTTGCTGAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036722