BGIOSGA036736

From RiceWiki
Revision as of 08:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036736| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036736, complete gene.| tag = OsI_372...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036736

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036736, complete gene.

LocusTag

OsI_37278

Ensembl Transcript ID

BGIOSGA036736-TA

Ensembl Protein ID

BGIOSGA036736-PA

Length

4720

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1248535..1253254

Sequence Coding Region

1253106..1253254,1251508..1251743),complement(1250915..1251096,1250313..1250384),complement(1250057..1250124
,1249749..1249869),complement(1249552..1249701,1249194..1249259),complement(1248990..1249112
,1248535..1248606

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1248535..1253254 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1248535..1253254 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGGCTGCTTCGACATGATGCACTACGGCCACTGCAACGCGCTGCGCCAGGCGCACGCCCTCGGGGACGAGCTCATCGTCGGCGTTGTCAGCGACGACGAGATCACCGCCAACAAGGGCCCGCCCGTCACGCCGCTCCACGAGAGGTTGATAATGGTCCGTGCTGTAAAATGGGTGCACGATGTCATTCCAGATGCACCTTACGCCATAACTGAAGATTTCATGAATAAATTATTCAATGAGTATAATATAGATTATATCATTCATGGCGATGATCCTTGTCTGCTCCCAGATGGTACTGATGCATATGCTCTTGCCAAAAAGGTTGGTCGATATAAGCAGATTAAAAGAACCGAAGGAGTGTCAACGACAGACATTGTTGGAAGAATGCTTCTTTGTGTTAGAGAGAGATCAGCTTCTGATAGTCACAACCACTCTTCACTACAAAGGCAGTTCAGTCACGGGCATGGCCAGAAAATTGATGATAGTGGATCTGGAAGTGGAACTAGGATATCTCATTTTCTTCCTACATCTCGGAGAATAGTTCAGTTCTCAAATAGCAGGGGTCCAGGTCCAGATTCTCGGATAGTGTACATAGATGGTGCATTTGATCTATTCCATGCTGGACATGTTGAGATATTGCGCCTCGCTCGAGAGCTTGGAGATTTCCTGCTTGTGGGTATTCACACAGACCAGACTATAAGTTCAACAAGAGGACCACATCGCCCAATCATGAACCTCCATGAGAGAAGTTTGAGTGTTTTGGCTTGCCGTTATGTTGATGAAGTGATCATTGGTGCTCCATGGGATGTTTCGAAAGATATGGAATTGCTTGATGCAACTGCTAGTAATAGTTCATTGAACATGGCACAGCTATGCATGCACAGTTCAAAGATTGAACATGATATTTATGCTACGCCAGCAAAAGCCTTGCTCACAGCTATTATTGATTTTAGATACAGATTAACAGATATGATTACCACATTTAATATTTCGTTGGTTGTTCATGGGACAATTGCTGAGAATATGGACTTTATGAAGGATGATTTAAATCCATATGCTGTTCCAAGGGCTATGGGCATCTACCGTAGGCTGGAGAGCCCTTTAGACATCACTACTAGTACTATCATAAGGAGGATAGTTGCTAACCATGAAGCCTACCAGAAACGGAACGAGAAGAAAGAAGCCAGTGAGAAGAAGTACTACGACAGTAAAAGCTTTGTCAATGGAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MDGCFDMMHYGHCNALRQAHALGDELIVGVVSDDEITANKGPPVTPLHERLIMVRAVKWVHDVIPDAPYAITEDFMNKLFNEYNIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSTTDIVGRMLLCVRERSASDSHNHSSLQRQFSHGHGQKIDDSGSGSGTRISHFLPTSRRIVQFSNSRGPGPDSRIVYIDGAFDLFHAGHVEILRLARELGDFLLVGIHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWDVSKDMELLDATASNSSLNMAQLCMHSSKIEHDIYATPAKALLTAIIDFRYRLTDMITTFNISLVVHGTIAENMDFMKDDLNPYAVPRAMGIYRRLESPLDITTSTIIRRIVANHEAYQKRNEKKEASEKKYYDSKSFVNGE</aaseq>

Gene Sequence

<dnaseqindica>1..149#1512..1747#2159..2340#2871..2942#3131..3198#3386..3506#3554..3703#3996..4061#4143..4265#4649..4720#ATGGATGGCTGCTTCGACATGATGCACTACGGCCACTGCAACGCGCTGCGCCAGGCGCACGCCCTCGGGGACGAGCTCATCGTCGGCGTTGTCAGCGACGACGAGATCACCGCCAACAAGGGCCCGCCCGTCACGCCGCTCCACGAGAGGTTCACTCCATACCCTTCGTCATTTTTTTTTTAAAAAAATCTTGAATGATGCACGATGTAATCCTACCAAACTGTTGCCTGATACTGGTTGTGCACTTTAATAATGATTCAGGCAAAATGGCAAATTAGCCTTATAGGTAGTGAATTCTCCTCTACATATGTACCCGTCAGTTTCAATTTGTGCACTAGTTCTGCAGTTTTCTGTGGACATTTCAAGTTCTTGGGGGTAACTGTTGTGGGTTGTTCGATCTTTTGCTGGTTTAATGGGTTAGCTGAGAAGCTGTTGCATCAAACTTCCTATCTTCTGTTTCAATTTCAGCTGCACACTGATTCTGTCCTAATCATGGGGAATATGTTACTGCTTTTACTATTTCATAACTTAATTTGTATCGCACGCTGATTTGTTTCAGTTTCGACTCTTTAGTTGCGTTCAATGTACTGTTGCACAATACAAGTTACTAGTGGAGCGCTTTTATAGGGATATCCTCAGATTAGTTTTTGAAGATGCAACGTTTTCCCCCCACACATCATATATGTGTCCGTCGGTCTTAATTTGAGCACTAGTCCAGTAATTCTATCTGGAAACTTTGAAATTGCTAAGGGAAATGTTGTGACATGTGGGTTGTAGTTAGTCGTCGGACCAAGTTTCTGATAACTTTGGTGGTGGATGAGCTGCATATGTTTCTCTAATTCATTTGAGAGTATGGATTCAATATCTGTGCAGTAACCAAAAAGATTAGCTCTATTTCTTTTGGGTGCCTGAAGGAGAAACACAGAAAAAAAAAAGGTTTGCTCCGCTGAAAAGTACTAAACAGTGACTTTTTGGTCTGTACATTCAAACAAATCCAAAAAACTTATTAACTCCTAACGATAAACCATACTAGACTTGCAGGTTTGGTTCTGCTTAGTTTGCCTTAAGTACCTGCTAAGTGATTCCTTGCTTTCCTTTGTCTTGTTGATAATCACAAGCTGCTCACATATGACATGGTATGTGTGGCATTTTAGATGTTAGGTGCTGCAACCTTTTTTTCCTCATTTAATCATCATCATGGTAGTTTAGCAACACTATAAATTTGTTATTTTTGCTGGTTTTCTTTTGTTGTTTACTGACTTTCATTGTGTCTGGTTTTCCAGTTTAGGAGTTACTGCACATATTGGTTTTTTTTTTCTTTCTATTTTTAGTTGTGTTACCAATCTTACGTGTGACCCCAGGCCGTATGGAATTTTGGGCATTTTTGTCCTTTTAGACTTGCAGTTTTGTTTCTTTGAATGTATTATGTATTATCATATACTCATATTTTCTACTTAAAAAAACCATTTTATTTGGAATGATTTTTTTATGTTTCTTTTTCTGATATACAGGTTGATAATGGTCCGTGCTGTAAAATGGGTGCACGATGTCATTCCAGATGCACCTTACGCCATAACTGAAGATTTCATGAATAAATTATTCAATGAGTATAATATAGATTATATCATTCATGGCGATGATCCTTGTCTGCTCCCAGATGGTACTGATGCATATGCTCTTGCCAAAAAGGTTGGTCGATATAAGCAGATTAAAAGAACCGAAGGAGTGTCAACGACAGACATTGTTGGTATTGATTCTGTTCTTTTCTGTTTTAATCATTAAAGTTTTTACTCATAGTGAAATTTAACCTAAAACTTCCATCGCAAGGGAATATATGATTTTTGTTATGTACTACAACTTTACAAGTTATTTCTTTGGCTCAATACCATAGCAATTTCCAACATTACAATTATTTATAGGTCAACCAAATAATTGTTTGTAGACAAGATCAATGCCCACCTGATTTGTCCTGAAGTGGTACTTTAGGAAAACATTCAAACTATTGCTTTATTATCATATGATGAACTGATAAGCTATTAAGCTCTCCAGACAATTAACTACATAATTCCCTTCTGTATCAATAAATTGCTTATGGTCATGAATAGGTTTTATTTTCATGCTAACTGCCCAGCTCATCTTTCTAGTAAATAAACTACAGGAAGAATGCTTCTTTGTGTTAGAGAGAGATCAGCTTCTGATAGTCACAACCACTCTTCACTACAAAGGCAGTTCAGTCACGGGCATGGCCAGAAAATTGATGATAGTGGATCTGGAAGTGGAACTAGGATATCTCATTTTCTTCCTACATCTCGGAGAATAGTTCAGTTCTCAAATAGCAGGGTACAGCTCTTTACATTCTTTCACGGAGGATCATTTTCTGAACTGCTCATGTAAAACTTTGGATGTCATTTTTTTTGAGATATCATATTTTTTGAAGGCATGAATTAAACATTGACAGCATAAAAATGCCTCATAGATGTTTTTTTTTTTTGCCTTTAAACAGTAGAGCACGAGTTATTTGGCTTTCAGGATCCTGTTACCATTTTACTATTACTTTTGCCATTTGAAAGACATTTGTTGTTTGGTTGCATTCTTTATCTAGTAAACATTGAGTTGAATGACCTGACGACAAATGGATTATTTCACAACTTAGATTTGTTCTGAGGTTATATTAATAAAGAATATAAGTTATATCCTTGAACTTCCAACAAGAACTAACATGCTGCTAAGCTCAACTATTAATTAAACATTGCATTAGTCGTTTATCATTTATTTCAAGCTGTTTACATTTGATACTATTCACTAGATAAAACTACTTGCTGAGTACGGCCACTTATTCTTTCTGTTGACTGTCAGCTTTACCTATGCAGGGTCCAGGTCCAGATTCTCGGATAGTGTACATAGATGGTGCATTTGATCTATTCCATGCTGGACATGTTGAGGTAAACGCAATGTCAAATGTCTGTCTCAGCATGTAGAGCAACTTGGCTATGCATTTGTTGGTTGTATGGTTTTACCTGTGGTTTTCCTTTTCCTTTTCTTTTTCTTATTGCAAGGGTGCAAACTGAAATGATCTTTCTAAGACATAGTGATTTGGACTTCCTGTGTATTTATAGTTTCTTCTACTTAGATATTGCGCCTCGCTCGAGAGCTTGGAGATTTCCTGCTTGTGGGTATTCACACAGACCAGACTATAAGGTAATAATGATGGTTTTTTTTTTTCACTGTCTCAATTTTTCCAAGTTACAATGCTTGTACTGTTTTTCAGTTTTGCATCTTAGTTTATAGTCAGGTTGTATTTGTATTGAAGCATAGCATCTCTACTCAATTCCGTTGTCATAACATTCTGTTTTTGGGGGCACTTGGTGTTTACTGTATTTGCCAGTTCAACAAGAGGACCACATCGCCCAATCATGAACCTCCATGAGAGAAGTTTGAGTGTTTTGGCTTGCCGTTATGTTGATGAAGTGATCATTGGTGCTCCATGGGATGTTTCGAAAGATATGGTTAGTTTTCTGTTCTACTTTATCATGATGCTCTCTTACTGTAGTAGGAATTGCTTGATGCAACTGCTAGTAATAGTTCATTGAACATGGCACAGCTATGCATGCACAGTTCAAAGATTGAACATGATATTTATGCTACGCCAGCAAAAGCCTTGCTCACAGCTATTATTGATTTTAGATACAGATTAACAGATATGGTCTGATTTGTGCTTATCCATGATTTTTTGCAGATGCACGATTTGCACGTAGCGTTAATTTTATGTCAGTCAAATAAACTAAAAGTTTAGGAGCTGGCTTGGTTCCAAAAGTTTAATTTGATGTAGTCTAAGTTTCCGTTAGATATGTTAAGAACCAGATTATGTATTTGTATGCAATATTATCATTGAAATTGACTATCTGAAATTCATACCCTTAACTGTTACTTATGATTATCAGGGTATGTGTCTTTGCAGTGTGGCTGGAGGTAGCTAATTTCCTTTTTCTATGCAGATTACCACATTTAATATTTCGTTGGTTGTTCATGGGACAATTGCTGAGAATATGGACTTTATGAAGGTTACTTACACAATACATTTTCTTAGAATATAAAGATGTATAGCATTGATCATTAACAACTGTTACTTGTGCACCTATCAGGATGATTTAAATCCATATGCTGTTCCAAGGGCTATGGGCATCTACCGTAGGCTGGAGAGCCCTTTAGACATCACTACTAGTACTATCATAAGGAGGATAGTTGCTAACCATGAAGCCTACCAGGTATGTAACATGGTATATTGGTGCTACGTCAAATTGGCTGGTGGAGTCTGGTTTTTCTGTTTGGTGCATGCAGCATGTAGTAAAGTACATAATCCCAGTCAAATAAATGCGATTTGCCTGTTGTCTACTTCATATTAATGATGTGTGTACATGATTTATTATAAACCGATGTTTGTGATAATGTGTTAGTGTTTTCTTGAAGCCCTTTGCATATGCGCTTTAAATATTTATCTGTTTCTCTGGGACCAATTTTTTCATGCTATAACTACGCTCAGCAACATGTTGTTTGGTGTGGGGACTTGGTGTAGTTTGCATTTATTTATTCTGGTCCATTGATGTGCTGTGGTTTTGTTCATTTTTAGTCTGTGGCGTTGCTTTTGCAGAAACGGAACGAGAAGAAAGAAGCCAGTGAGAAGAAGTACTACGACAGTAAAAGCTTTGTCAATGGAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036736