Os12g0182300

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0182300| Description = Protein kinase-like domain containing protein| Version = NM_001072852.1 GI:115487665 GeneID:4351679| Length = 4220 b...")
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Gene Name

Os12g0182300

Description

Protein kinase-like domain containing protein

Version

NM_001072852.1 GI:115487665 GeneID:4351679

Length

4220 bp

Definition

Oryza sativa Japonica Group Os12g0182300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4177469..4181688

Sequence Coding Region

4177975..4178282,4178896..4181509

Expression

GEO Profiles:Os12g0182300

Genome Context

<gbrowseImage1> name=NC_008405:4177469..4181688 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4177469..4181688 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggccaagaacaggtggccatggcggagaggaggccttgttactgtcgcaacaatggcttcttgctgctgctggtacaagttctcctcttcttgttcttgtttcttgattcgtccatggtcgccactgccgcgtcggcgccggcaccgctaaatacgactcaggtatcgatcatgaaggagctttctggcttggttactgccagtgccaagtggaacacgagcgattcgaatccatgccgatgggatggagtgagttgctcttctagctccaattccatatcagttgtgaccaaccttactttgtctgggtatggtttgtccaactccaccatatttgcaaccatatgctctcttgacaccttgcaaatccttgatctctctaagaattccttcaccaattcgatagagcaattcttcacctcttcttgctccatgaaggctggattgcggtcacttaatctcagcagcagccagctatccatgcctcttagtaatttctctggttttccccttcttgaggttcttgacttgtccttcaattctttcagtggtgatgtcagaacccagttgagttctttgctcaagctgagaagcttgaatcttagtagcaataacttggctggtgatgttcctacaagcatgaccccgtctttggaggaattggtgttgtccatcaacaatttcagtggtagcattccaatagctttgttcaattaccaaaatcttactatgctggatcttagtcagaacaatctaaatggtgatgtaccggatgagttcttaaagttacccaagctcaagactttgctcttatcaggtaatcaactgagtggcaatatacctgtgagtgtgtcaaatgttgcaagccttgctcggtttgcagctaatcagaacaattttaccggtttcatccctagtggtatcaccaagaatgtgaagatgctggatctgagttacaacgaacttagtggagtgattccctctgatattcttagtcctgtgggactgtggactgttgatctcactcacaataagctcgaagggcccatccctagcagcttgtctccgaccctctatcggttgaggcttggtggaggcaactctctcaatggaaccatcccggccaccattggtgatgcatcgaccttggcttatcttgagctggatagcaatcagttgacgggaagcataccattggaacttggcagatgcaagagtttgtctttgctgaatctggcatcaaataagtttcagggtccagtgcctgatgcaatcagcagccttgacaaactggtagttcttaaactccaaatgaacaatctggatggacctatcccaagtgtattttctaatttgacaagcctgatcacattgaatcttagtggtaattcattcactggagggataccaagagaaatcggcaagctgccaaagctttccattttgaatttgcaatgcaacaagatcagcggcaccattccagattcactccatttattaacttctctaattgagctcaatctggggaataatatcttgactggtaccatcccaacaatgccgaccaaattgagtactgttcttaatctaagccacaacaatctcagcggatctattccttcaaatattgacttattgagtgatctagagattcttgatctttcatacaacaacttgtatggtgaggtgccggcctcacttgcaaagctagaaagcttgacgcaactagtgctttcttataatcacctttctgggtccattcctatatttcgtcaacatgttgatattgctaccaatggaaatcccgatcttacaaatggtacaagaaattatgacaacgcccctacaagtggtaagagaaggacacacaatacagtcatcatcgtcgttgccattactggtgctcttgttggattgtgcttgcttgctgctattgttacaatttcatattctaagagaatttatcgtgttgaagatgaaggaccatcaactgaggatgttgctcgaatcatcaatggtcacctcataactatgaatagtatccatacctctgcaattgatttcgtgaaagcaatggaagcagtctccaatcacagcaacatttttctgaaaacaaggttctgcacttactataaggctgtgatgcctaatggctcaacctattctttaaaacagattaattgtagtgacaagatattccaaattgggagccaagggaaggttgctcatgaacttgaggtacttgggaagttgagcaattccaatgtaatggtgccattggcttatgtgttgacagaagacaatgcatacatcatctatgagcatgtgcacaagggcacggtgttcgatttccttcatgctggaagatcagatgttctggactggccttcacggtatagcatagcttttgggctagcccaagggctgacatttcttcatgggtgcactcagccagttctgcttcttgatctgtcaacaaggactgtccacttgaagtcaatgaatgagcctcagattggagatgttgaactttacaaaattgttgatactttgaagagcagtgggagcctttcgaccattgctggtacagttggttatattccaccagagtatgcatacacgatgaggttgacgatggctggcaacgtttacagctttggagtaatcttactggagcttttgactgggaaaccatcggtcagtgatggcatcgagttagccaagtgggctctgagtctttcaggcagccctgatcagagggagcagatccttgacaccagggtctcaagaacttcagctgctgttcacagccagatgttgtcggtcctgaacatcgccctcgcttgtgttgcgctctctccagatgctcgaccaaagatgcgcaccgtcttgaggatgctattcaacgcaaagtga</cdnaseq>

Protein Sequence

<aaseq>MGGQEQVAMAERRPCYCRNNGFLLLLVQVLLFLFLFLDSSMVAT AASAPAPLNTTQVSIMKELSGLVTASAKWNTSDSNPCRWDGVSCSSSSNSISVVTNLT LSGYGLSNSTIFATICSLDTLQILDLSKNSFTNSIEQFFTSSCSMKAGLRSLNLSSSQ LSMPLSNFSGFPLLEVLDLSFNSFSGDVRTQLSSLLKLRSLNLSSNNLAGDVPTSMTP SLEELVLSINNFSGSIPIALFNYQNLTMLDLSQNNLNGDVPDEFLKLPKLKTLLLSGN QLSGNIPVSVSNVASLARFAANQNNFTGFIPSGITKNVKMLDLSYNELSGVIPSDILS PVGLWTVDLTHNKLEGPIPSSLSPTLYRLRLGGGNSLNGTIPATIGDASTLAYLELDS NQLTGSIPLELGRCKSLSLLNLASNKFQGPVPDAISSLDKLVVLKLQMNNLDGPIPSV FSNLTSLITLNLSGNSFTGGIPREIGKLPKLSILNLQCNKISGTIPDSLHLLTSLIEL NLGNNILTGTIPTMPTKLSTVLNLSHNNLSGSIPSNIDLLSDLEILDLSYNNLYGEVP ASLAKLESLTQLVLSYNHLSGSIPIFRQHVDIATNGNPDLTNGTRNYDNAPTSGKRRT HNTVIIVVAITGALVGLCLLAAIVTISYSKRIYRVEDEGPSTEDVARIINGHLITMNS IHTSAIDFVKAMEAVSNHSNIFLKTRFCTYYKAVMPNGSTYSLKQINCSDKIFQIGSQ GKVAHELEVLGKLSNSNVMVPLAYVLTEDNAYIIYEHVHKGTVFDFLHAGRSDVLDWP SRYSIAFGLAQGLTFLHGCTQPVLLLDLSTRTVHLKSMNEPQIGDVELYKIVDTLKSS GSLSTIAGTVGYIPPEYAYTMRLTMAGNVYSFGVILLELLTGKPSVSDGIELAKWALS LSGSPDQREQILDTRVSRTSAAVHSQMLSVLNIALACVALSPDARPKMRTVLRMLFNA K</aaseq>

Gene Sequence

<dnaseqindica>3407..3714#180..2793#actgggagtctgggaggagcaagaagaggagagaagagagccatggccaagaacaccgagagccccaaaacctagggaaagagaggaaaaaatcgattttcttgggtggtggttgagcctgcagtgaagttcatcagggaggaaagggaggggattaagggaaggagatacaggaatcaatgggaggccaagaacaggtggccatggcggagaggaggccttgttactgtcgcaacaatggcttcttgctgctgctggtacaagttctcctcttcttgttcttgtttcttgattcgtccatggtcgccactgccgcgtcggcgccggcaccgctaaatacgactcaggtatcgatcatgaaggagctttctggcttggttactgccagtgccaagtggaacacgagcgattcgaatccatgccgatgggatggagtgagttgctcttctagctccaattccatatcagttgtgaccaaccttactttgtctgggtatggtttgtccaactccaccatatttgcaaccatatgctctcttgacaccttgcaaatccttgatctctctaagaattccttcaccaattcgatagagcaattcttcacctcttcttgctccatgaaggctggattgcggtcacttaatctcagcagcagccagctatccatgcctcttagtaatttctctggttttccccttcttgaggttcttgacttgtccttcaattctttcagtggtgatgtcagaacccagttgagttctttgctcaagctgagaagcttgaatcttagtagcaataacttggctggtgatgttcctacaagcatgaccccgtctttggaggaattggtgttgtccatcaacaatttcagtggtagcattccaatagctttgttcaattaccaaaatcttactatgctggatcttagtcagaacaatctaaatggtgatgtaccggatgagttcttaaagttacccaagctcaagactttgctcttatcaggtaatcaactgagtggcaatatacctgtgagtgtgtcaaatgttgcaagccttgctcggtttgcagctaatcagaacaattttaccggtttcatccctagtggtatcaccaagaatgtgaagatgctggatctgagttacaacgaacttagtggagtgattccctctgatattcttagtcctgtgggactgtggactgttgatctcactcacaataagctcgaagggcccatccctagcagcttgtctccgaccctctatcggttgaggcttggtggaggcaactctctcaatggaaccatcccggccaccattggtgatgcatcgaccttggcttatcttgagctggatagcaatcagttgacgggaagcataccattggaacttggcagatgcaagagtttgtctttgctgaatctggcatcaaataagtttcagggtccagtgcctgatgcaatcagcagccttgacaaactggtagttcttaaactccaaatgaacaatctggatggacctatcccaagtgtattttctaatttgacaagcctgatcacattgaatcttagtggtaattcattcactggagggataccaagagaaatcggcaagctgccaaagctttccattttgaatttgcaatgcaacaagatcagcggcaccattccagattcactccatttattaacttctctaattgagctcaatctggggaataatatcttgactggtaccatcccaacaatgccgaccaaattgagtactgttcttaatctaagccacaacaatctcagcggatctattccttcaaatattgacttattgagtgatctagagattcttgatctttcatacaacaacttgtatggtgaggtgccggcctcacttgcaaagctagaaagcttgacgcaactagtgctttcttataatcacctttctgggtccattcctatatttcgtcaacatgttgatattgctaccaatggaaatcccgatcttacaaatggtacaagaaattatgacaacgcccctacaagtggtaagagaaggacacacaatacagtcatcatcgtcgttgccattactggtgctcttgttggattgtgcttgcttgctgctattgttacaatttcatattctaagagaatttatcgtgttgaagatgaaggaccatcaactgaggatgttgctcgaatcatcaatggtcacctcataactatgaatagtatccatacctctgcaattgatttcgtgaaagcaatggaagcagtctccaatcacagcaacatttttctgaaaacaaggttctgcacttactataaggctgtgatgcctaatggctcaacctattctttaaaacagattaattgtagtgacaagatattccaaattgggagccaagggaaggttgctcatgaacttgaggtacttgggaagttgagcaattccaatgtaatggtgccattggcttatgtgttgacagaagacaatgcatacatcatctatgagcatgtgcacaagggcacggtgttcgatttccttcatgctggaagatcagatgttctggactggccttcacggtatagcatagcttttgggctagcccaagggctgacatttcttcatgggtgcactcagccagttctgcttcttgatctgtcaacaaggactgtccacttgaagtcaatgaatgagcctcagattggagatgttgaactttacaaaattgttgatactttgaagagcagtgggagcctttcgaccattgctggtacagttggttatattccaccaggtaatggactgttctggttcaatttgagtgcataattatcaacttaagcagttaaactgaaactgctgatagtggttatttactgttctctgttgatttgatctatttatagttcatatctatgttttcaagtaatttacttgaggcaattctgtttgcattacctgcatacttcaattgaccacaatcctgtctacactcctatgctagttttgttttcagaatttctggagaaaacatatttgctttgtttcccatgggttgtcgtctactacatttgtagtatcatccaaaaaaggggcttttaactatttgccactcttacggatgttgcttaatgatttaccactaggcccacatgtcatagacacatgagagcccacatgtcattgacagggtgtggcaaatcgttaactgccatgtcacaaaagtggcaaatagttaaatttccctccaaaataagcacatctcctacttttgacaaatctaataaaaaacctagcttctatgatcttgtccttcagtacactagcacaaaatgatttgacgctttccgagatctatatgagatgagatttatactgaagctaaattttgttgaactatgttgcagagtatgcatacacgatgaggttgacgatggctggcaacgtttacagctttggagtaatcttactggagcttttgactgggaaaccatcggtcagtgatggcatcgagttagccaagtgggctctgagtctttcaggcagccctgatcagagggagcagatccttgacaccagggtctcaagaacttcagctgctgttcacagccagatgttgtcggtcctgaacatcgccctcgcttgtgttgcgctctctccagatgctcgaccaaagatgcgcaccgtcttgaggatgctattcaacgcaaagtgatctggcatgatatgttttggtagcttaggtaggttctgaatggagtttgatcattttgcttagtttgtggatgtcagcaatcagtatacggggtccttgtatagtaccagcaccatagttcaaggtagagtagtagattatgatatggctgatcaatttagtattcagatatctattttggaatgaatgaccaatgggtttatctatgctgtatcatcatatattcacacatggttattagcataccttgtacacggcaattccatataacaatagtagtgaaatagagccatagttaaggtagaacagtagatagactatgatatatatccctgaacaatttagaagccagatatctgttttggaatgaatcaggaattgtgttcttctatgctatatgatcatatttgtaaatggttggttgtgtacatccatgtgggatgtcgaggccggattggcatccattatctaacaaacatatatataaattgttattacttattagc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0182300, RefSeq:Os12g0182300