BGIOSGA036746

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Revision as of 08:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036746| Description = BGIOSGA036746| Definition = Oryza sativa Indica Group BGIOSGA036746, complete gene.| tag = | tid = BGIOSGA036746-TA|...")
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Gene Name

BGIOSGA036746

Description

BGIOSGA036746

Definition

Oryza sativa Indica Group BGIOSGA036746, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036746-TA

Ensembl Protein ID

BGIOSGA036746-PA

Length

5068

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1147375..1152442

Sequence Coding Region

1152227..1152442,1151736..1152116),complement(1150217..1150252,1148394..1148491),complement(1148261..1148310
,1147943..1148007),complement(1147375..1147683

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1147375..1152442 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1147375..1152442 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCCGAGAACTTCAGCGTCGACATGGTCAAACTCCTCTTCCGTTACGGCGCATCGGCGAACATCCGCACCAAGGGCGAGTATGTCATTGAGGGCCTCCTCCCTCTCCATGTTGCTGTCGAGAATGCCAGCATGCACAAGTACATTGAGGATCATTGGGCTCATGGGGACCATATCATCAACCTCATCTTCCTCCTTTGTCTTCCTGAGATGAAAATGTTCTTGGACACGACTAGATTAATTGCCAAACAGACAGATAACATTGTCGACGAGGTATGGAATTACATTCGTGAAGAAAAGCATGTCCAGGCAGCAATTTTGCTGCTGGCTGCTCAAAAGCAGCTCCGTGGCCGCCTTAACAACAGCAGTGGCAAAGCCTCTCTGAACGGGTTTGATATTGTTAAAAGCCACATTGATGATGCTCTTAACACCATACATCTTGAGGGGTTAAATATGGTTAAGGAGGGAAAGAATGGCAGGGCACTAAAGAGATTGAAAGACAAGAAGGAAGCCCTTCTTACAGCACTTGTACTAGTTGGCATTGTTCACAAAGCTGGTGAAGCTCTTGAGGGATACATTCAAACTCATTCACAGTTGAGGGCTAACATAAAGGGTAAGATGAGCAAGAAGGTGCGCCATGACGAAATTGTTGAACATGTTTCATCAATTCTAAAAAGCAATGGCATTGCTCATTCTGGGGAAAGCATTGACACTGGAAAACTTGAATGCTACCAACATGGTGGGGGGATGTCGATNGGCAAGTCAGATTCACAAAGAGTGGGCTATGGGGAAACTATTGAAGCGGACAAGTCATCTTCTGATATAGGCGAAGTTAGTAAAATGATCCTGGGAAAGCAACGACCTAAAGGATCAGCCATAGACGAAGTGAGAGATATGTTCTTCCCATACTGGAAATCGGTGTTGTCTCGACGGTTGCAGCTAAAGATAGTTCCATCCTGTCAACTAAGCAGGAAGGACTTGCTAAGTGCTGAAGCGAGCAAGAAGGGGACCAAGAGTATTGACCACCCGTGTAACCCAATCAAATCAATGGGAAATCTTGGTTCGATGGGCTGGCCCCCATTGTCAAGTGAGTCCAGAAGGATGCTTTATACTGTTGCTTCAATGTCCCGGAAGGTGTTTAAGCGCACTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAENFSVDMVKLLFRYGASANIRTKGEYVIEGLLPLHVAVENASMHKYIEDHWAHGDHIINLIFLLCLPEMKMFLDTTRLIAKQTDNIVDEVWNYIREEKHVQAAILLLAAQKQLRGRLNNSSGKASLNGFDIVKSHIDDALNTIHLEGLNMVKEGKNGRALKRLKDKKEALLTALVLVGIVHKAGEALEGYIQTHSQLRANIKGKMSKKVRHDEIVEHVSSILKSNGIAHSGESIDTGKLECYQHGGGMSXGKSDSQRVGYGETIEADKSSSDIGEVSKMILGKQRPKGSAIDEVRDMFFPYWKSVLSRRLQLKIVPSCQLSRKDLLSAEASKKGTKSIDHPCNPIKSMGNLGSMGWPPLSSESRRMLYTVASMSRKVFKRT</aaseq>

Gene Sequence

<dnaseqindica>1..216#327..707#2191..2226#3952..4049#4133..4182#4436..4500#4760..5068#ATGGCTGCCGAGAACTTCAGCGTCGACATGGTCAAACTCCTCTTCCGTTACGGCGCATCGGCGAACATCCGCACCAAGGGCGAGTATGTCATTGAGGGCCTCCTCCCTCTCCATGTTGCTGTCGAGAATGCCAGCATGCACAAGTACATTGAGGATCATTGGGCTCATGGGGACCATATCATCAACCTCATCTTCCTCCTTTGTCTTCCTGAGATGGTTTCTTCTTCATTCAATTCCTATCCCTATTATATTACTGCCAGAGCATTTAGCCTATTTCAAATACTAGCTTGGACCAATAATTAATTTCAGCCACCACTGACATGCAGAAAATGTTCTTGGACACGACTAGATTAATTGCCAAACAGACAGATAACATTGTCGACGAGGTATGGAATTACATTCGTGAAGAAAAGCATGTCCAGGCAGCAATTTTGCTGCTGGCTGCTCAAAAGCAGCTCCGTGGCCGCCTTAACAACAGCAGTGGCAAAGCCTCTCTGAACGGGTTTGATATTGTTAAAAGCCACATTGATGATGCTCTTAACACCATACATCTTGAGGGGTTAAATATGGTTAAGGAGGGAAAGAATGGCAGGGCACTAAAGAGATTGAAAGACAAGAAGGAAGCCCTTCTTACAGCACTTGTACTAGTTGGCATTGTTCACAAAGCTGGTGAAGCTCTTGAGGGATACATTCAAACTCATTCACAGGTAATTGCTGAAATTTCCCCATTGTTACCATTGCTTTCTGATACCTGTGGGTTTTGATTTTTCCAGTTTCGTTTTCTTTAAATTTGTGTGATGCTTACTTCCCATGATTTTGATCTACTAGTGACTCATTTTCTTTAAATTTGTGTGATGCTTACTTCCATGATTTTGATATACTAGTGAAACCTCGAATTACCCTTGTTTTAGAAAGCTGTGGTGGGTGTGGATCGCTTTTCTTTTTCTTTTTGGTGATATGTAAACAGTTGGAGGAGCTCCTGCTGCATTGTATCAACTAGTCACATCCATATTATAAAAAGGAGTTAAAAAGAACTGGACCCATGCAGTTAATGGCATCTTTTAGCCTCCATTTTCATGTAAATCCAAGAGGCTGAATAGCAGGCCCAGCATAGTGGTAGTATACTGCTAGGTTCAGGTCTAATGCATGAGTCAAAAATATATGGAAACATGGGAGTAGATGCAGTGTGTTCTTAATGCGAAGCAAGGTGGCCCACCATCTTTTAGATGCCTACGAGTTTAATGCATAAGTCAAGGTGACACCTTACATCTAAATCTATACAATGTTGCCAACTTCTGTATTACACACATGCTTACCAATTATTGAGCCCATGTACCATTCGTTTCCCCTTTCTAAAGAAGATCTAAGAGGAGGGGAAGAGGTCCTCTTCAGTCTCAGCAGCAGAATGCAAGAAGGGAAAAAAGGACATGTATCCTGTCCAAAGAGGCAGAGCAAAGCGCAAGAAAAAGAACATAGATGAGGGAAGAGGTGCCCTTTCCAAACTAGCAGAGCAAAGCATAGAACAAGAAACAGAGCAGAGAAGAGGGAAGAACAAGTACCTGTCCTGTGCGACGGTTGACAGCTGGGGAAGTGGAGAGCATGAAGGAGAAGCAGACCCGTCGGAGAAATAGGGGCGTTAGGAAGGCAGGCTGGTCCTCTGCATCTCCCCCTTCTCCTTTTCTATCTCTAGGCCACTAGCACCCCTCACACACCAGCCTTTCGACTGTGCACGCCACACTTGCTCTCCCCACATGTGCGTACCCCCATGGCACTTGCGGAAGGCTAAGCGAGCAATATGCTCTCTTCCACTGGTGCTTGGGCGCGAAAGGCGATGCCTTTACGACACTTTAAAAACCAAGAATTGATATTTGCATGAACTATAGAAGAGCATAGGGGTCCATTGAAGGTAAGTTTATCTTTTTGGGATCAGGAACATATAAAATTTGTAGGGAAGATCAATTGTTCTTAAGTATGGTTTGAGAATAAAAATATAATAGCACCCTCCCTTGGATTGGGCTACCTTTTAAAGTGGGACCCCATGTAAGTTTAGCAAAGCAAGTTTTTTAGCTTGGAAACTGAGTCTTTGAGTTTTTGTAAATATTTTCAATTTTATTCATGAATATATGCGTATTCAGCAATTTTAATTATGACTCCATATATATTCAGCTTCTATTCTTTTTTTTTTTTAAGTTGAGGGCTAACATAAAGGGTAAGATGAGCAAGAAGGTGCGTAGTTGTTATGTGGGAGATCATGAGGCTAATAAAGGGAATAGCACTTAGATTATGTCAAGGTAACCTGCAAAAGGGTAGAGATGAATAGATGATAGTGTTAAGGGTGATGGTGGTTTGTCTTTAGCCCCATTGGAGTGGAAACCTGATATTGGATATGCTGCCCTTGTTAATAATATATGTTTGAGTGGAAGTTTATATATTCTTTCTCTAACCATGACTATGACTAGGAATCATCATATTGTTCTCTCAACAAGTCTTTCATATTTTAATTGAATTCAAGCTCTAAGAAATGAACGAAACAAAAGCTGGACTACCCTGAAGCAACTTCTCATAATGACCCAAATTACATGACCAGAAGGCCTGCATTATGGAAGCTTTTGTTGGTGCTGACCAGTTCTTTTTCTTCCTCATTTATTTCTTCTATTCCTCACCTGGCATGTTCATGTAAAACGCAAAACACATGTCGGATTGTTATTTTCTTTCTTATTTATTTGCTTTATTCTACGTGCATGTTAAAGTTTAGTGAGAATGCATGTGTCAAAAATTGTGACCCTCTTTCACCCCACGTCTCTATGCACACGAAGAGTGGGTTCTAATATTTTCTGTTCAACTTTACTTGGGTCTGTTTCGAAGGCCCGCCATTTCACAGCATCCATATATGCCATCATGCCACAATGAATATATCAATAAATTTAAAAAGTGGATGCTTGAAAAGAAAGATTAACCTGAACAATCATGGTATTACCATCATGCCACAACTTAGTTGGCAGTGACGATACATGTTCACATGGTACCTATCATAGGAGAATAATAGTTTAAGCGTTAAGCCTCCACCTTCTCACATCAAGCCTAGCAGAGAAAAGGCCTTGGCTTTTGGTGTCACTTAAGATTCGTTTATCATTAGGCAACCTTCTATAGTTTGTCTTTACTACTTTTTTATTTGTAGTAGGAAAAGTGAAAAATTCTCTGCTGGGGTCCATGGCAATGAAACTGCAAATTCCATGCAACTATCTATACCCCCAGAGTGTAGAACATAACATTGTGACACCACAATATTCTAGAGTTGATTACCATAGAGCATCTGTATAGTTTAGACTGTTATACTTTCAATTCCAAAAAAGTGATCTGGTTTGTAGCAGGTGCAACGGTACCGAAAACAACTCTCACCTGCCAATATTCTGCTTTACACGTGTGCCGGCATAGTGCTGCCATACCACTGTTCTGTTGTGTAAGATCTGTTTTAATTTTCTTCTGCTGTTATACTGTAGTGTCGTCAAGTAATGTGCCATTGGTTCCAGACAAAAAGTATAAGTTGGGCAACTTGGTTGTTTGTTCATCTAGCCAAATGAGATGTTATTGACAAGGCCCTAGTGGGCTTTTTGGTGTTGTCTTGTTTGCGGTGAGCAAGGATGGCAAATAAATCCAAGCTTGGAATAGTAGAGTTGGTTGACTATGGCAGATTGGCAGCATGCCAAATCAATGACTTACTGATTCAACTCTTGACCACTTAGTATTTGTGTAGATGTAGTGCTTAAAACACCATTGTTGACTTTCAGATGGTCTGTACTGTTTGTCTCGAGAGATGATGTTATTGAAGGCTGTTATGTGTCTTGCAACCACCACCACCTGCAAGTGTAGATATCTGAATTCTCGTTTTGGAATAATATCCTTGAACATTTTGTAATGATACGTTTTAACAATTTTCTTGGTGAAATGTAGGTGCGCCATGACGAAATTGTTGAACATGTTTCATCAATTCTAAAAAGCAATGGCATTGCTCATTCTGGGGAAAGCATTGACACTGGAAAACTTGAATGGTTTGACATCCTACTGGCTTTATATATATATTCAGTTCATGTTTTTGTGCATATAATTTATGCGTGATTTATTGTGTTTGAAGCTACCAACATGGTGGGGGGATGTCGATNGGCAAGTCAGATTCACAAAGAGGTGTGTTTCATTTTGGTTGATCCTATTTCTTATTAAAATAAACTAGAAAGGAAAATAGCTGTGAAACTTTATTACGTGTCCACCCATTACAAAGTCATTTGCTGTGGTGAATGCACAACTTTGGAACATTGCAGAAAGCTTATGACTTGCATCCAGCGCAAAAGGGGGTGCAACCAGACTCTGTACACCAACCTCGGAACTATGCTTTCCATTTCATAAGCTGTCTCATGACCAATTTCATTGCTGATTACAGTGGGCTATGGGGAAACTATTGAAGCGGACAAGTCATCTTCTGATATAGGCGAAGTTAGTAAAATGGTAATGAGATACGCAATTAAATTTATTTGTTGAGTCTAATTCATGCTGATGAAATTAGTATGAAAACAAGATTGTTCCTCCAAATTTGCTCCTACTGACCCCTATCAATTAACAAGATATGGAAATATTTGATAACGTAATGCATAACCATCAATTGTTGCCTTATTGGTTAACAACAGAATGAATACTCACTACTTAAATCTGAGTGTTTTTATAATTTTGTTTATGCGTTCAGTTGCTAATTTTCTCATGTAAACAGATCCTGGGAAAGCAACGACCTAAAGGATCAGCCATAGACGAAGTGAGAGATATGTTCTTCCCATACTGGAAATCGGTGTTGTCTCGACGGTTGCAGCTAAAGATAGTTCCATCCTGTCAACTAAGCAGGAAGGACTTGCTAAGTGCTGAAGCGAGCAAGAAGGGGACCAAGAGTATTGACCACCCGTGTAACCCAATCAAATCAATGGGAAATCTTGGTTCGATGGGCTGGCCCCCATTGTCAAGTGAGTCCAGAAGGATGCTTTATACTGTTGCTTCAATGTCCCGGAAGGTGTTTAAGCGCACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036746