BGIOSGA036754

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Revision as of 08:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036754| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036754, complete gene.| tag = OsI_372...")
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Gene Name

BGIOSGA036754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036754, complete gene.

LocusTag

OsI_37242

Ensembl Transcript ID

BGIOSGA036754-TA

Ensembl Protein ID

BGIOSGA036754-PA

Length

6490

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1053395..1059884

Sequence Coding Region

1059700..1059884,1055975..1056108),complement(1053395..1055910

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1053395..1059884 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1053395..1059884 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCATCGCCTCGAAGGTCCTTGGTAGCTCGGACAACTATCCCACGAAGGGCAACTCTGACGCATCGCCCTCCTCCCCCTTCGCCTCCACCTCCACGCCATGCAGCCGCGGCGGCAACAACGACGACAACAAGGACACGCACCGCTCCTACCCTCTCCTCCCTCTCCTCGCTCGGAGCTCGCTTTGCCCAAGAAACAACATTTCCATGGAAGCTCCTAAGCTTCGTTTCGTCAGATGCCCAGGATGCCTCCAGCTTCTTGTGGAGTACCCAACCATTGCTGTCTACCAGTGTGGTGGCTGTGGTACTGTTCTTAGAGTTTTGATGACTAGTGGTATCTACTGTGCAGCGAAAAATCGAGTCGCGCCAGCAACTAATACTAATGCAGAATCTGGTGAGCACAATGAATTTTCAAATATTTCAACAGGGGATTCTCAGAACAACAAATTGATCTGTACAGATGGGCAGAAAATTTCACCATCCTCCAATGCACAACCTGGTGTGGTGCAGGAGAAGATTACCTTTGCTAGCGAGGAAAAAACTGTGTCCACTAGCAATAGTATCGACTCCAATGAGCATGTTAACATCGAGTGTTCCTTATTTGATGGGGATGCCAGCAATCATGATGTGAGGACTGAAGGCATAAATGATGAAGATAAAGTCACTGTGTCTAATTCAACTCTTGATTTAGTGAGGAAAGTAGAGAATGTTGAAACCGATGGAAATGAAAAAGGTTCCTTTACGGATGATGGGAGCATCAGCAATGAAGTTGCTACCACCCAAAGCATGGTCCACATGGATGGAGCTGGTTTTGATAATAATTTTACAGAAGTACAGAGTGCAGCTGAGGGGAAGTGTACACTTAGCGATGCTAATCTGGACTCACAAGAGATAGTTGCGATTTGCCAACCTGATAACATTTCTGTTGGCACAAAAGAAAGGGTTCAGCTATATGAAGGTTTTCATGTTGAATCACATGAAGATCTGATTGAAGAATTGGTGAGATCTCTTTCACTCAGTGACGACGAAGAAGAGTTTGTCGATATAGCAGAAAACAGTGAACTTAATGATGCTTTACGTTCTCAAATGGGCAGCTGCAGATTTTCATTGGGGAGCAAAATGAATGATGGCCCTCGAACTGATCCTCATGGCCGGTTAATCGAAGAATTAGAGATGTCTTTCAGTGATGCTGAAGAACCACTAGACCAAAATATTATGGTCTCCCTCAATGACATAGAAAAGCCTATTTTAGATGAGGTCAGTAAAGAAAATCACATTTTGGAGGAGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAACAAAACCACATTTTGGACGAGGATGGTAAAGAAAACCACATTTTGAATGAGGATGATAAGGAAAACCTCATTTTGGATAAGGGCGGCGAGGACACTTTGGATGCAGGTGGTGCTAATTCATATGAAGAAAGAGTATTGCCATCAGATGATGGGCTTCTCAAATCTGGACAAAGTTTCCAACAATGTGAGCTGGCTGCTGTTAACATGGCAGAAAAGGATGAGGGGCATCTAGAAGAAACCAACATGGCTAACCATGCTGAAGCAAACAGTGGAACTGCTGCTGTTCTTTCAAATTTGTCAAACGATAAATTTTGTGCCATATTACCACCTAGCTGTGATGGGAGAAAAGAAGAAAAATCTAACATACATAGAGGTAGAGAACTCTGTCAAGGATTGTCACTTGATTCTGTAGACTTCCGATCAATCCAAAATTTTATCGAGTCTCAAATGGATGGGACCTCAAGTTCTCTTTCAAGTGGCTCTCCAAGTCATGGTGACCTGGAACATAATAGATCAAACAGATTCAAGAAAATTGATCGACTTGAGCGCCTGAGGAAGATGGATGATCTAAGAGATCAGTTAAATAGGCTTTCTAGCCAGAAAGGTTTGGAAAATAGGTACAAGAACAAAGGCCCTGGACTCCTTCAGGAACAGATTAGCTACAGACACCTTGAACAACATCCTTGTGGTTTGGATGGTGATTCTATCCTGGATTCTGATATTATCGATTCCTATTATGATCAAGGAAATCCACCAAGGTACCCACCACCAGATCCGTTCTCCCCAACTCATTCGCACTATCATTGTGGACATGGGCAACCCCATATCCCATATAACTGCAGTGCATGGGAGTTTAATTCATATTATCAGTCCTCATATGCGGGAAGTACAGTTCTTGAACACGAGTCACTTCGCTCGAGCTACAAGGAGCAGAAACGTGCAGTGAGGAAAAGCATTCTGCGGTCTCTGTCTGGTGCTTCCCCATTTACCATCTGCAATGGCTGTTTCAATTTGGTTCAAGTGCCATCAGACATCTATGTATCGAAAAAGAAGATCGCTAAGTTCCAGTGCGGTCGGTGCTCCAAGGCCCTTATGTTATCATTTCCTGCTACAAATAGTGAAGATGCAAAGCTCAGTAATAAGGAAGTAAATCGAAAACCAAACAAGCCTGTCCACAATAGTGTTGTTGGTATGGAGGGTGGCTATTCTTTTTCTGCTGAATGCTCACGAGGGGATCCTGTGAGCATAAGTGAAGAATGTGGAGCTTCAATCTCAAGAAGCTTCTCTGGTAGAACTAGAGCAGCTGTTGCTGCATCAGGAAGTGGAAAAAAGGTGTCAGACTCGGCACTTCATCGGCTCATGGGGTATGATTCAGCAAGCCAGTTGTTACGGCGGAGCAGAGCATTTGACGATGGATATGACAGTTTTGAATCCATGGTGCCAGTATCAAACAGAGTATCCAGAAGAAAGAATTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MVIASKVLGSSDNYPTKGNSDASPSSPFASTSTPCSRGGNNDDNKDTHRSYPLLPLLARSSLCPRNNISMEAPKLRFVRCPGCLQLLVEYPTIAVYQCGGCGTVLRVLMTSGIYCAAKNRVAPATNTNAESGEHNEFSNISTGDSQNNKLICTDGQKISPSSNAQPGVVQEKITFASEEKTVSTSNSIDSNEHVNIECSLFDGDASNHDVRTEGINDEDKVTVSNSTLDLVRKVENVETDGNEKGSFTDDGSISNEVATTQSMVHMDGAGFDNNFTEVQSAAEGKCTLSDANLDSQEIVAICQPDNISVGTKERVQLYEGFHVESHEDLIEELVRSLSLSDDEEEFVDIAENSELNDALRSQMGSCRFSLGSKMNDGPRTDPHGRLIEELEMSFSDAEEPLDQNIMVSLNDIEKPILDEVSKENHILEEDGKESHILDVDGKESHILDVDGKQNHILDEDGKENHILNEDDKENLILDKGGEDTLDAGGANSYEERVLPSDDGLLKSGQSFQQCELAAVNMAEKDEGHLEETNMANHAEANSGTAAVLSNLSNDKFCAILPPSCDGRKEEKSNIHRGRELCQGLSLDSVDFRSIQNFIESQMDGTSSSLSSGSPSHGDLEHNRSNRFKKIDRLERLRKMDDLRDQLNRLSSQKGLENRYKNKGPGLLQEQISYRHLEQHPCGLDGDSILDSDIIDSYYDQGNPPRYPPPDPFSPTHSHYHCGHGQPHIPYNCSAWEFNSYYQSSYAGSTVLEHESLRSSYKEQKRAVRKSILRSLSGASPFTICNGCFNLVQVPSDIYVSKKKIAKFQCGRCSKALMLSFPATNSEDAKLSNKEVNRKPNKPVHNSVVGMEGGYSFSAECSRGDPVSISEECGASISRSFSGRTRAAVAASGSGKKVSDSALHRLMGYDSASQLLRRSRAFDDGYDSFESMVPVSNRVSRRKNL</aaseq>

Gene Sequence

<dnaseqindica>1..185#3777..3910#3975..6490#ATGGTCATCGCCTCGAAGGTCCTTGGTAGCTCGGACAACTATCCCACGAAGGGCAACTCTGACGCATCGCCCTCCTCCCCCTTCGCCTCCACCTCCACGCCATGCAGCCGCGGCGGCAACAACGACGACAACAAGGACACGCACCGCTCCTACCCTCTCCTCCCTCTCCTCGCTCGGAGCTCGCTGTACGCTGGGGCTCCTCGTGCACGGGCTAGAAGCAGACAGGCAAGCGTGTCGCCCGTGGCTCAGTAGTGGCGGGCAGTGCAACGCGCGAAGAGGCTGGACCACTGAAGTTTTGATTCGGCCTCCGACACGCCTTCCTTCTCCTTTGCGAGCTCCGCTTGGCCTCCTCCTTAGCTACCTCCTCCTCGCCTGTCGCCTACAAAAGCCACTGTCGGCCGTGCGTGGCCAAGGGAGAGGGAGGGGTTGTGCTGGAGGGTGACGGTGACGATGCTCGAGATTGACATCCGCCGCCGACCGCATCTGGGGAGGAAGAGGGGAGAAGGGGAAGGAAATGCCACCACCCACCGGCCACATCTGGGGAAGAAGAAGGGAAAAAGGGGAGAAGGGGAGGAGATAGAGAAGAGAGAGAGGATGAGGTGGAGGAAGTGGGGTCCACTGACATATGGGTCTCACTATTATTTTTTAATCTCATTGTTTGACTGACATATGTGTCCATATATTTTGTTTTAATTTTTAAATTGTCAGATTTTATTTCATGTGACACGTCAGATGAAAACCGAGTCAAATTAGTCATATAAGCGCCATGCCAGTTGAAACCACCTTGGGACCTATATTGCATCGGTTTTAACAGTTGAGGACCTGTTGTATTTGGGTTGTATTTGGTATTAGGTTTTAATAGTTGAGGACCTGTTGTATTTGGTATTATGGTTCAAGAACGAAAATCGAACTCGCTGTCAAAAGAGGCCTAGACTGAACTTATTCGTTTGATCTAGTAGTAATAAACTAGTAATTGTCTTTGGCCCATTCGGCCTGATAGGGTTTAATGGTCTTGGCTTGGTCAGCAATTTGAGGCTGGAATGAGAAGGGCCAAATTAGGCCCATTACATTTCAGAGACATTAAACATGTACTGATGTATACTACCTCAGTCCTAAAATATAGCAACTTTTAGTTATTAAGTGTGTCTAGATTCAGACTAAAAATGCTTATATTTTAGGATGGAAGGAGTATATATTTGACATGAACTAGCTAGATAAGTAGTACTCACTGAAATAAAATTAATTTCCTCTGCAACCAAAAGGTGGGCATGAACTAGCTATCGTCGGATGGATGGTTGAAACGTCAAGCTCACCAAAATCTTGAGAAGCTAGAGATGGTTAAGGACGTGAACAGTACGTACACAAACTTAATGAAACGCATTATTCTCCCACAACTTGTACAAAATTTAGTGTCGGCAACAACCTATCTTCTTCTTTTTGATAAAAAGGAGGCCAAGCCCAAGCAACAACCTATCAATCATTCAATCGATCTGTGACCAAGAAGAGAACAAGGAGCAACAGGTCTACCATGTCCAATTGTCCATAGGAATCAGCACGTGTGCTTACCTGCTAAAAAGAGTTGGAATTTTGCTACTGTTGAGTGAACTTAACTGTGAGATGTTTGTGTCCTTTGAACCGCATAGAGAAAACTGATGGCCATTCATGAGCATCGCGTTTTGTCTCATCCCCAATAATACCTCTCCTTGTCTTCTCCATTTTCCTGGTCCAATCTTCTCATTTAATTTTCTCTCCTCCAATTCTCAATCTGATCAATCCTCATTTAGTCCTTACCAGATAGACCAACTTGAGCTACCCATTAATGCTCTAGTAATCTTCTTTACCTTTTGTTTCTCTTACCATTTTGCTTATGGATTACTCGTTCCTACAAAGGTGAACTTGTTTAATCCTTCTAACCAACTGACACCAACCCGGTCGATTAATTCTGTCATCAAATGTACTTCTCCGCTTAATTATTGTGAAACTAAGGAAGCCATCGTTTGGCTTATTTTAAGCATAAGCGAAACGACATTTTTGCAAATAAAAAATAATTTATGAATAAAACATTTATATAGTGTTCTTAGCAATCTAAAAGCCAAAGCTGAAAAATAAACTCCAATGAAAAAACCTCAAAATTAACTTTGAATTTAAGGTTGAAAATTCAAATTTCTTCAATGGAAAAACCTCAAAATCAACTTTAAATTTAAAGTTGAAAATTTAAATTTTGGCTGATAAGTATAAGCATAAGCGAAAAGATGGGGCGTATACAAGATAATACTACATCTATCTCTTTATATATAACGTCATTGACTTTCAAAAATAATATGTTTGACCATTCATTTATTTATTTTTTTTTTGCAAATATAAAAAAATTAAGTCATAATTCATGTTTATAAAAACTTTAACGATAAATTAAGTCAGAACAAAATAAATAATAATTACATATAAGATGAATTGTAAAATATATCTAAAAAGTTAACGTATCGTATATTAAAAATGGAGGGAGTAATAATACCTTTTCTTTTGCTAAAATTGATCCACGTCTAGATTTTCGTTTTTGCGCAGAGCCACTTATCTAGACTTGAAATCTAGAAATAGCCGATTAAAAAACAAAAAAATGGCTGTCATATCCACCAATGGAATTGAGCTTGACTGCCTAGTCAACAAGGCAAGGCATCATCAACGTTGGAAAGTTTAGATTTTTTTTCCAACGGAACAAACAAAACCTTGAGATTTTTCTTCTTGTAGTATTGTTTCTCAACTTTGACTGGTGCCTGATACCCACGGCCACAGCGCACCAGTGCACAGGTTACTTACCCACTGTACTAACTAATGCCCACGCCTGGGCTACTAATCATCTTTTATTAAGTCCAAATCCATCTACAGTTGAGACTTGAGATGAGAGAGAGAGAGAGAGCTGTCTCTTTCCTTTGCATTCCCCACACAAAGAAGAACGAAGAAGAACAAGCAGCAGATCAATTGGTCCTCCTCTCCTCTCCAATACTAGTATACTACCACACTGGCTGGCTGGGTTGGCTGCTCCTCGTTTCTCCTACCTTTGGCCTGCCCATTAATGGCCCCTGGTATATTAACCTTCTCTTCTCTTCCTCCCTCCTAGACTCCTCCTGCTCTGCTTTGCTTCCCTTCCTTGTGCGCCCCGCCCCCACGAAAATCCACTTCTTTTCCTCACCTTGCCACTGTCGGTTCTTGCCTCTTTCTTTGAGGACTCGCCCGCCCAACAGAAGGAGGCAAAGGATGATCCAGTCTTGAATGACCAGTTCCGGAGGATCTGCGCAAGCAAGGTGCGATTCCCCCCCCCCCCCCCCCCCCTTCTTTCTCGCATCTGCTTTCATCCCCCCTGAACCTCAAATAACACTTCCTCTAGATCTTTCCATCAACTTAATTAATCCATGTATTGCCTATCTTTGCGGTTGCGAAATGCTTGCTGATTTCTGGCCTCAGTTGACAATCATTATTGATCCGTCAACTTAATCTAGATTAGTTTCTGTGGACTAATTGATCCCCCAAAATATTTGTTTTTATTTTGTTTTATTTTCTAGACCATACTATCGCTGTGGTGTTCCTCATGTGATCCACTCAAGAATTTATCTTGTTGCCTGTGTAGATAGCTGCGCCTAGCATGTAAGAAGCACGACCATTCCATTACCATGGAGTTCCTGTAATCCAATCATTCGAGCAAACTCCATGCATTGGATCAGTAACTCAACAATGGTGGTTACCATTTTGCCCAACTGCATCTAGTTCCTATATTTGACCAGTTGCCCAAGAAACAACATTTCCATGGAAGCTCCTAAGCTTCGTTTCGTCAGATGCCCAGGATGCCTCCAGCTTCTTGTGGAGTACCCAACCATTGCTGTCTACCAGTGTGGTGGCTGTGGTACTGTTCTTAGAGGTAACAATCATTTAGTCTTCCTTTCAGTTTCCTCGTTACATATATTTCTGTTTCTCATGTACAGTTTTGATGACTAGTGGTATCTACTGTGCAGCGAAAAATCGAGTCGCGCCAGCAACTAATACTAATGCAGAATCTGGTGAGCACAATGAATTTTCAAATATTTCAACAGGGGATTCTCAGAACAACAAATTGATCTGTACAGATGGGCAGAAAATTTCACCATCCTCCAATGCACAACCTGGTGTGGTGCAGGAGAAGATTACCTTTGCTAGCGAGGAAAAAACTGTGTCCACTAGCAATAGTATCGACTCCAATGAGCATGTTAACATCGAGTGTTCCTTATTTGATGGGGATGCCAGCAATCATGATGTGAGGACTGAAGGCATAAATGATGAAGATAAAGTCACTGTGTCTAATTCAACTCTTGATTTAGTGAGGAAAGTAGAGAATGTTGAAACCGATGGAAATGAAAAAGGTTCCTTTACGGATGATGGGAGCATCAGCAATGAAGTTGCTACCACCCAAAGCATGGTCCACATGGATGGAGCTGGTTTTGATAATAATTTTACAGAAGTACAGAGTGCAGCTGAGGGGAAGTGTACACTTAGCGATGCTAATCTGGACTCACAAGAGATAGTTGCGATTTGCCAACCTGATAACATTTCTGTTGGCACAAAAGAAAGGGTTCAGCTATATGAAGGTTTTCATGTTGAATCACATGAAGATCTGATTGAAGAATTGGTGAGATCTCTTTCACTCAGTGACGACGAAGAAGAGTTTGTCGATATAGCAGAAAACAGTGAACTTAATGATGCTTTACGTTCTCAAATGGGCAGCTGCAGATTTTCATTGGGGAGCAAAATGAATGATGGCCCTCGAACTGATCCTCATGGCCGGTTAATCGAAGAATTAGAGATGTCTTTCAGTGATGCTGAAGAACCACTAGACCAAAATATTATGGTCTCCCTCAATGACATAGAAAAGCCTATTTTAGATGAGGTCAGTAAAGAAAATCACATTTTGGAGGAGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAACAAAACCACATTTTGGACGAGGATGGTAAAGAAAACCACATTTTGAATGAGGATGATAAGGAAAACCTCATTTTGGATAAGGGCGGCGAGGACACTTTGGATGCAGGTGGTGCTAATTCATATGAAGAAAGAGTATTGCCATCAGATGATGGGCTTCTCAAATCTGGACAAAGTTTCCAACAATGTGAGCTGGCTGCTGTTAACATGGCAGAAAAGGATGAGGGGCATCTAGAAGAAACCAACATGGCTAACCATGCTGAAGCAAACAGTGGAACTGCTGCTGTTCTTTCAAATTTGTCAAACGATAAATTTTGTGCCATATTACCACCTAGCTGTGATGGGAGAAAAGAAGAAAAATCTAACATACATAGAGGTAGAGAACTCTGTCAAGGATTGTCACTTGATTCTGTAGACTTCCGATCAATCCAAAATTTTATCGAGTCTCAAATGGATGGGACCTCAAGTTCTCTTTCAAGTGGCTCTCCAAGTCATGGTGACCTGGAACATAATAGATCAAACAGATTCAAGAAAATTGATCGACTTGAGCGCCTGAGGAAGATGGATGATCTAAGAGATCAGTTAAATAGGCTTTCTAGCCAGAAAGGTTTGGAAAATAGGTACAAGAACAAAGGCCCTGGACTCCTTCAGGAACAGATTAGCTACAGACACCTTGAACAACATCCTTGTGGTTTGGATGGTGATTCTATCCTGGATTCTGATATTATCGATTCCTATTATGATCAAGGAAATCCACCAAGGTACCCACCACCAGATCCGTTCTCCCCAACTCATTCGCACTATCATTGTGGACATGGGCAACCCCATATCCCATATAACTGCAGTGCATGGGAGTTTAATTCATATTATCAGTCCTCATATGCGGGAAGTACAGTTCTTGAACACGAGTCACTTCGCTCGAGCTACAAGGAGCAGAAACGTGCAGTGAGGAAAAGCATTCTGCGGTCTCTGTCTGGTGCTTCCCCATTTACCATCTGCAATGGCTGTTTCAATTTGGTTCAAGTGCCATCAGACATCTATGTATCGAAAAAGAAGATCGCTAAGTTCCAGTGCGGTCGGTGCTCCAAGGCCCTTATGTTATCATTTCCTGCTACAAATAGTGAAGATGCAAAGCTCAGTAATAAGGAAGTAAATCGAAAACCAAACAAGCCTGTCCACAATAGTGTTGTTGGTATGGAGGGTGGCTATTCTTTTTCTGCTGAATGCTCACGAGGGGATCCTGTGAGCATAAGTGAAGAATGTGGAGCTTCAATCTCAAGAAGCTTCTCTGGTAGAACTAGAGCAGCTGTTGCTGCATCAGGAAGTGGAAAAAAGGTGTCAGACTCGGCACTTCATCGGCTCATGGGGTATGATTCAGCAAGCCAGTTGTTACGGCGGAGCAGAGCATTTGACGATGGATATGACAGTTTTGAATCCATGGTGCCAGTATCAAACAGAGTATCCAGAAGAAAGAATTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036754