BGIOSGA036762

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Revision as of 08:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036762| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036762, complete gene.| tag = OsI_372...")
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Gene Name

BGIOSGA036762

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036762, complete gene.

LocusTag

OsI_37232

Ensembl Transcript ID

BGIOSGA036762-TA

Ensembl Protein ID

BGIOSGA036762-PA

Length

3406

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:976933..980338

Sequence Coding Region

979443..980338,979213..979249),complement(978822..979043,978568..978675),complement(978264..978458
,977920..978168),complement(977345..977629,976933..977184

Genome Context

<gbrowseImage1> name=IndicaChromosome12:976933..980338 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:976933..980338 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAAGCTGCTTCACCCTCGACTCCGCCTCCGATGATGGAAGAAGCACTGCCCAGGGCCAGGGATGGTGCGCCGGAGTCGGTGGCTTCCTGTCCAGCTTCTTCTCCGCCGGCGCGGCGCGCGCGGACGGAGGGAAGCCGTCGCCGGACTGGGACGCGCACGGGCTCGCGGCCAGCGCGCTGCCGGTGCCGCTCTCCAGGCTGGACGGCAAGAAGAGGTACAAGGTCTCGGAGCTCACCTTCCTCGACCGCCGCACCCGCGCCGCCACGGAGGACCCCCTCTTCGACGCGCTGCGCCCCGGCGGCGTCTACACCAGGGCGCAGCTGCGCGACGAGCTCGACGCGCTCGCCGCCTCCGGCATGTTCGACCACGTCACCTTCCAAACCAAGCCCAAGCCGGACGGCACACTCGGCCTCACCGTCTCCTACGCCGAGACCCAGTGGCCCGCGGTCGAACACCTCAAGTGCATCAACGTGGGCGGCCTCATGGCGCGGCCGGACGGCGATGAGCTCGAGCCCGACGACGACATGACGGCGAGGGAGAGGATGGAACACCTCCGGAGGCAGGAGCGGGAGTACCGGCAGCTCGTCCGCCGCGCCAAGCCGTGCGTACTGCCGGAGAAGTTGCAGAGGGAGCTGCAAGGGATGGTGAAGAAGCAGAGGAAGGTGAGCTCCGGGTTGCTCAAGAGGATGGCGGGGCGCATCGAGAGGTGGTACCACGACGAGGGGTTCCAGTGCGCGCAGGTGGTCGGCTACAACGGCAACCTCGACGCCGGCGAGGTGGTGTGCGAGGTGGTGGAGGGGGACATCACCAAAGTGGAGTACCAGTTCGTGGAGGCAATGTCGTCAACGGCAACACCAGCATCTCTGTCATTGATAGGGAGCTTCCTCAACAGTTTTGTTATTGTTGCCAGTATCACTGTCAAGCTCCATCTTCGTCCTGGGCATATCTACAACAATGGGGCAGGGAAGCAGGCTCTGAAGAATATCGATTCGCTTGGTTTGTTCTCCACTGTAGAAGTAGAGCCTCGCCCTGATGAGACAAATCAAGGGGGAGTAATAGTTGCAATTAAGCTCAAGGAACATGACCCAAAATCAGCTCAGGTGATCACAGATTGGAGCATTGTGTCTGGCTCTCAAGGAACACCAACTCTGGCGTCCATTCAACCAGGAGGAACCGTGTCATTTGAGCACCACAACATCTGTGGTCTAAAAAGGTCTCCCATTGGTTCTGTTACAACCAGCAACTTGCTCAACCCTGAGGATGATCTTTCGTTCAAGCTGGAGTATGCCCATCCTTATCTGGATGGCGTCGACAACCGTAGTAGGAACCGCACCTTCAAAATTAGCTGCTTCAACTCCAGGAAATTGAGTCCTATATTCGTTGCTGGTCCCAATATGTATGAAGCTCCACCTATCTGGGTTGATAGAATTGGATTTAAAGCCAATATAACAGAGAGCTTCACAAAGCAGAGCAAATTCACGTATGGCCTCGTAGTGGAAGAGATTACAACACGCGATGAGAATAACAATATATGTACACATGGTTCTCGACAATTGCCTAGTAGCGCCTTGAGCATGATTGGACCTCCCACAACCTTAAGTGGGACTGGCGTAGACCGAATGGCGTTTCTACAAGCTAATATAACTCGAGACAATACAGAGTTCGTCAATGGTGCAACAATCGGTGACAGATGTATATTCCAGTACTCAGAACAAAGTTTTCTTGTCGGCTACAGATGGATCAAGGCCTCGGTATTGGAAGCAAGAACCCTCTTCAACCGTCATCAGCTTACGGTGACAAAATTCATAAATTTGAACAAGCAAGAGAAAGGCCCTCGCAAGCCACCACCAGCTGTTTTGGCCCTTCATGGCCGTTATGCTGGGTGTGTAGGAGATTTGCCAAGCTATGATGCATTTGCACTTGGAGGACCTCATTCAGTAAGGGGCTACGGTATGGGTGAATTGGGTGCTTCCAGAAATCTTCTTGAGGTTGCCACTGAGCTGAGCGTGCCTATTACCGTAAAGAACAGACACACCCAGGTGTATGCATTTGCTGAGCATGGCACTGATCTTGGGAGCTCCAAGGATGTGAAAGGGAACCCTACTGAGTTTTTCAGACGTGTTGGCCATGGCTCATCCTATGGCGTTGGTGTCAAGCTTGGTGCGGTAAGGGCGGAGTATGCTGTTGATCACAATACTGGCACAGGGGCCTTCTTCTTGAGATTTGGTGAGAGATTCTAG</cdnaseq>

Protein Sequence

<aaseq>MPSCFTLDSASDDGRSTAQGQGWCAGVGGFLSSFFSAGAARADGGKPSPDWDAHGLAASALPVPLSRLDGKKRYKVSELTFLDRRTRAATEDPLFDALRPGGVYTRAQLRDELDALAASGMFDHVTFQTKPKPDGTLGLTVSYAETQWPAVEHLKCINVGGLMARPDGDELEPDDDMTARERMEHLRRQEREYRQLVRRAKPCVLPEKLQRELQGMVKKQRKVSSGLLKRMAGRIERWYHDEGFQCAQVVGYNGNLDAGEVVCEVVEGDITKVEYQFVEAMSSTATPASLSLIGSFLNSFVIVASITVKLHLRPGHIYNNGAGKQALKNIDSLGLFSTVEVEPRPDETNQGGVIVAIKLKEHDPKSAQVITDWSIVSGSQGTPTLASIQPGGTVSFEHHNICGLKRSPIGSVTTSNLLNPEDDLSFKLEYAHPYLDGVDNRSRNRTFKISCFNSRKLSPIFVAGPNMYEAPPIWVDRIGFKANITESFTKQSKFTYGLVVEEITTRDENNNICTHGSRQLPSSALSMIGPPTTLSGTGVDRMAFLQANITRDNTEFVNGATIGDRCIFQYSEQSFLVGYRWIKASVLEARTLFNRHQLTVTKFINLNKQEKGPRKPPPAVLALHGRYAGCVGDLPSYDAFALGGPHSVRGYGMGELGASRNLLEVATELSVPITVKNRHTQVYAFAEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGVGVKLGAVRAEYAVDHNTGTGAFFLRFGERF</aaseq>

Gene Sequence

<dnaseqindica>1..896#1090..1126#1296..1517#1664..1771#1881..2075#2171..2419#2710..2994#3155..3406#ATGCCAAGCTGCTTCACCCTCGACTCCGCCTCCGATGATGGAAGAAGCACTGCCCAGGGCCAGGGATGGTGCGCCGGAGTCGGTGGCTTCCTGTCCAGCTTCTTCTCCGCCGGCGCGGCGCGCGCGGACGGAGGGAAGCCGTCGCCGGACTGGGACGCGCACGGGCTCGCGGCCAGCGCGCTGCCGGTGCCGCTCTCCAGGCTGGACGGCAAGAAGAGGTACAAGGTCTCGGAGCTCACCTTCCTCGACCGCCGCACCCGCGCCGCCACGGAGGACCCCCTCTTCGACGCGCTGCGCCCCGGCGGCGTCTACACCAGGGCGCAGCTGCGCGACGAGCTCGACGCGCTCGCCGCCTCCGGCATGTTCGACCACGTCACCTTCCAAACCAAGCCCAAGCCGGACGGCACACTCGGCCTCACCGTCTCCTACGCCGAGACCCAGTGGCCCGCGGTCGAACACCTCAAGTGCATCAACGTGGGCGGCCTCATGGCGCGGCCGGACGGCGATGAGCTCGAGCCCGACGACGACATGACGGCGAGGGAGAGGATGGAACACCTCCGGAGGCAGGAGCGGGAGTACCGGCAGCTCGTCCGCCGCGCCAAGCCGTGCGTACTGCCGGAGAAGTTGCAGAGGGAGCTGCAAGGGATGGTGAAGAAGCAGAGGAAGGTGAGCTCCGGGTTGCTCAAGAGGATGGCGGGGCGCATCGAGAGGTGGTACCACGACGAGGGGTTCCAGTGCGCGCAGGTGGTCGGCTACAACGGCAACCTCGACGCCGGCGAGGTGGTGTGCGAGGTGGTGGAGGGGGACATCACCAAAGTGGAGTACCAGTTCGTGGAGGCAATGTCGTCAACGGCAACACCAGCATCTCTGTCATTGATAGGGAGCTTCCTCAACAGGTTTGCATACAAATAATTTTGCTAGTATCGATCACTGTCGAGCTCAATGTCTAAAAGAATGTTAAGATTTTTAATAGCAGATGGCTATGATTTTGTTGTTTAATTTTGCGACGAATTTCTTAGCCGATTTCGCCGATAATTATACCGGTTGAGCCAAGTGACTGTTTTGCAATAAAATGTCTCTTGATCAAAGTTTTGTTATTGTTGCCAGTATCACTGTCAAGCTCCATGTCTAACAAGAAAAACTAACATTTTTAATAGCAGATGGCTATGATTTTGTTGTTTGATTTTGCAACGAATTTCTTGGCTTTGCATATATTTGATTATGATTCTCTGATAACTGTACCAGTTGTGCCAATGTGACTGTTGTGCAATAAAATGACTGTTGATATCTTGCAGCTTCGTCCTGGGCATATCTACAACAATGGGGCAGGGAAGCAGGCTCTGAAGAATATCGATTCGCTTGGTTTGTTCTCCACTGTAGAAGTAGAGCCTCGCCCTGATGAGACAAATCAAGGGGGAGTAATAGTTGCAATTAAGCTCAAGGAACATGACCCAAAATCAGCTCAGGTGATCACAGATTGGAGCATTGTGTCTGGCTCTCAAGGAACACCAACTCTGGTAACGTGCCACTGGTTTTCAACCTTTTGTTCTTCCAGATCGAATGTGTACTTAAAATGCTAGACAGCATTGCGAATATATAAATTCCCTCATCACTGCAAGTCATTTTGTATAACCTCACAACTCATGTCACAACTTCCTCTTAGGCGTCCATTCAACCAGGAGGAACCGTGTCATTTGAGCACCACAACATCTGTGGTCTAAAAAGGTCTCCCATTGGTTCTGTTACAACCAGCAACTTGCTCAACCCTGAGGTGAGTTGGTAGTTAGTTTTTTTTTTCTTTTTCCCATCAGCTTCGATGCTGCTTTTGGCTGCTGTTATATCAGTCATACATGATAATATGATATTTCGGCGAGTATTAGGATGATCTTTCGTTCAAGCTGGAGTATGCCCATCCTTATCTGGATGGCGTCGACAACCGTAGTAGGAACCGCACCTTCAAAATTAGCTGCTTCAACTCCAGGAAATTGAGTCCTATATTCGTTGCTGGTCCCAATATGTATGAAGCTCCACCTATCTGGGTTGATAGAATTGGATTTAAAGCCAATATAACAGAGGTTTGCACAATTGATATTACCTTCCACTCCTTTTAACTATCATGGACAGTTATTAACAACATATAGGAAACTGCATTTTTGGATCTTTTATTCAGAGCTTCACAAAGCAGAGCAAATTCACGTATGGCCTCGTAGTGGAAGAGATTACAACACGCGATGAGAATAACAATATATGTACACATGGTTCTCGACAATTGCCTAGTAGCGCCTTGAGCATGATTGGACCTCCCACAACCTTAAGTGGGACTGGCGTAGACCGAATGGCGTTTCTACAAGCTAATATAACTCGAGACAATACAGAGTTCGTCAATGGTGCAACAATCGGTGACAGATGTATATTCCAGGTATGCTTATATGTACCCTGGTTCTAGGAACACAAACTCAACCTGTACTCATTGCCAGGTAGCTCTGTAGCAAAAAGTTGTCACCTGAAAAGACCAACGAGACTGATCGATGTTTTGGAAAATTTTAGGAAATGTTTCGGTACATTTGCTCAAGAGTTTCAAAGGATGGTGAACAAGTAATTTGCGTGTTATTGGGAAAAAAAATACTTTGCAAACATATTGATGATATTTGGGTTAATAAGTTTTGTTCAATAGTAGCATGTTTTTATACAAAATTCTCCATGTTAAAGTACTCAGAACAAAGTTTTCTTGTCGGCTACAGATGGATCAAGGCCTCGGTATTGGAAGCAAGAACCCTCTTCAACCGTCATCAGCTTACGGTGACAAAATTCATAAATTTGAACAAGCAAGAGAAAGGCCCTCGCAAGCCACCACCAGCTGTTTTGGCCCTTCATGGCCGTTATGCTGGGTGTGTAGGAGATTTGCCAAGCTATGATGCATTTGCACTTGGAGGACCTCATTCAGTAAGGGGCTACGGTATGGGTGAATTGGGTGCTTCCAGAAATCTTCTTGAGGTGAGTATTAGCTAGTCCATTAGTGAATTTTGAGTCTCATGAATTGCTGAATTCAGAATTTCAGATGCACAATTTTCACCGTTTATGATATTACATGCTTAGAGACTCAGATTTCCAAAAATTTGCCGCTTTGTTTTCTGAATTGTTGTGACCTATGAAGGTTGCCACTGAGCTGAGCGTGCCTATTACCGTAAAGAACAGACACACCCAGGTGTATGCATTTGCTGAGCATGGCACTGATCTTGGGAGCTCCAAGGATGTGAAAGGGAACCCTACTGAGTTTTTCAGACGTGTTGGCCATGGCTCATCCTATGGCGTTGGTGTCAAGCTTGGTGCGGTAAGGGCGGAGTATGCTGTTGATCACAATACTGGCACAGGGGCCTTCTTCTTGAGATTTGGTGAGAGATTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036762

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