BGIOSGA036785

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Revision as of 08:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036785| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036785, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA036785

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036785, complete gene.

LocusTag

OS12G0108100

Ensembl Transcript ID

BGIOSGA036785-TA

Ensembl Protein ID

BGIOSGA036785-PA

Length

7234

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:625084..632317

Sequence Coding Region

632226..632317,631797..631997),complement(631340..631669,631140..631223),complement(630768..630970
,628735..628802),complement(627213..627889,626996..627100),complement(626790..626912
,626229..626399),complement(625958..626087,625595..625804),complement(625084..625227

Genome Context

<gbrowseImage1> name=IndicaChromosome12:625084..632317 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:625084..632317 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTGATTATAGGTCTCATTTGTGGGGCTTCACCGCCAAAAAGGAAGAGGCATACTCAGGAGAAAACGATGAACGCCAGCAGATCTTACAGTTGATAATAGAAGAGATACAACCTGAGACCTCGGAATTGCCCGATGGAAGGATACAAGTGCATCAAGAGATAGACGCTGCAGTTGCAGAGCTGATAGAACAAGAAGCCCTTGATGAATTAGAGCAACTGGTGGGAGCCCAACTAGAAGCCCCTGCAGATCAGCAAAATCCAGTTGAGCAACATCAAGATGAGGATGACAAGCTGAGTTTAGATAATTTGTTGGAACAACATCGTTGGGAGGGAGCTCTGCAGCGGCTGATGCGCATGGTCCGTAATGGCGAAGCCATCAATGGCCCAGTACCTGACGCGCCACCCCAAGACATTTATGTTGCTCATCCCGAGATCGTCATTTTGCTCATGGCAGAAGAGTACCTAAGGCTTATGCGTTCTGGCAATGCTGCTGCTGCTATGCGCTATTATCATGACAAAATTGAGATCATTTATTCGGGAAATACCGGAAGTGCCTTTGTTAACGGTGGTGTTCTGAAAGAAATCCAGGATTGGGTGAATGCAAAGAGAGATACTCCATCGGGAAAAGATGAAGCTACGACCCATATGGAGAATACCTGCCAGGCGATCCATGACTATTTGAAGCTTTATTTTCCAGCATACAGGCCACAGATTGGAGGAAAAGTTAGAGGTCACCAAGTAAGCAAGGTTTGGGAGTTCGGGGAGAGGCTTGGAAAAGATGGCGGCCGCTGCTTAGCGTGCCACAAGAAAGTGAAGGGATTCAATGTGACCAAACTCCAGAATCACCTGCAAGGATCGGTTAAAAGGCAAGGGACACAATGCCCGGCAATCAATGACTACATCCTAATCCTGCACCAAGCAAGCAATCTCCAAAGTGCAAGCTTTCTCTTCTTCCTGCGTCTGGATCTCGCTCAGGTACTTGATGATCCGAAGATGTCGTCAAACTCCACTCTAACAGACTCTCTTCATGAGAGAACAATTGTTTTTGGCCTGAAACTTTGGGTTGTAATTGGGATATCTGTTGGAGCATCCCTACTTGGTGTTCTTCTCATCCTTATTGTATGCCTCACCATACAAACTTGGATCAAACGGTCACGTAGGACATTCAAGGAAATTCCAATTACCCAAATACCTTCTGCATCCAAAGATATCAAGGAAGTGAGGGCAGTGGAGGAATTTTTGCCCAATGATTTCGTTGTACATGATGGACTTCTACTCGCCATTCAGAATGAACCTGTTGAACCAGTGGATAAAGATGTGAATCAGTTTGCTCAAGAGGACAAGACGATACAAGGAGAAGATAACAGTTCTTCTGTTCCTCTTCATTATGTGGACAACTATGATGGAATTCAATCTGTTTCCACATGTGAACAGTCTTCCTCGCATGCTCCCGCCGACTCTGTTCCCTTGCCAGGCTTACCTGAGTTCTCTTACCTTGGCTGGGGTCATTGGTTCACTCTCAGGGATCTGGAACTTGCAACCAACTGTTTTTCAAAGGATAATGTAATTGGTGAGGGTGGGTATGGTGTTGTCTACCGTGGCAGATTATCAAATGGCACCCCAGTGGCTGTCAAAAAAATCCTTAACAATCTAGGACAAGCTGAGAGAGAATTCAGAGTGGAAGTTGAAGCAATTGGTCATGTCCGACACAAGAATTTGGTTCGCCTTTTGGGGTACTGTGTTGAAGGCACTCAAAGGATGCTTGTGTATGAGTATGTCAACAATGGGAATCTTGAAAGTTGGTTACATGGAGAGTTATCCCAATATAGTTCTCTCACTTGGCTAGCGCGCATGAAAATTCTTTTGGGTACTGCAAAGGCCCTTGCTTACTTACATGAGGCAATTGAACCAAAAGTTGTGCATCGTGATATCAAGGCCAGTAATATATTGATTGATGATGAGTTTAACGCCAAAATATCTGACTTTGGTTTGGCCAAGATGCTAGGTGCTGGTAAAAGTCATATTGCTACTCGAGTTATGGGTACTTTTGGCTATGTTGCGCCCGAGTATGCTAACAGTGGACTTTTGAATGAAAAGAGTGATGTCTACAGTTTTGGGGTGGTTCTGCTGGAAGCTATTACAGGTAGAGATCCCATTGACTATGATCGCCCTCCAGATGAGGTAAACCTAGTTGACTGGCTTAAAATGATGGTTGCCAACAGACGATCAGAAGAAGTTGTTGATCCAAACCTGGAGAGAAGACCATCGACAAAGGAGCTCAAACGTGCCCTTTTGACAGCTCTGAGGTGCATCGATTTGAATTCTGAGAAGAGACCAAGGATGGACCAGGTGGTCCGGATGTTGGACTCTAATGAACCCATTCCTCAAGAGGAAAGAAGACAACGACAGAACCACATCTCTAATAATTCAGAAACCGAGCCATTAAGAGGCAAGAGCAGCAGCGGCAAGAGTGATGCCCCTGAAAATGAGATGAGGCCACCTCGGTATAAGAATCGATCATTTCCCCCCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSDYRSHLWGFTAKKEEAYSGENDERQQILQLIIEEIQPETSELPDGRIQVHQEIDAAVAELIEQEALDELEQLVGAQLEAPADQQNPVEQHQDEDDKLSLDNLLEQHRWEGALQRLMRMVRNGEAINGPVPDAPPQDIYVAHPEIVILLMAEEYLRLMRSGNAAAAMRYYHDKIEIIYSGNTGSAFVNGGVLKEIQDWVNAKRDTPSGKDEATTHMENTCQAIHDYLKLYFPAYRPQIGGKVRGHQVSKVWEFGERLGKDGGRCLACHKKVKGFNVTKLQNHLQGSVKRQGTQCPAINDYILILHQASNLQSASFLFFLRLDLAQVLDDPKMSSNSTLTDSLHERTIVFGLKLWVVIGISVGASLLGVLLILIVCLTIQTWIKRSRRTFKEIPITQIPSASKDIKEVRAVEEFLPNDFVVHDGLLLAIQNEPVEPVDKDVNQFAQEDKTIQGEDNSSSVPLHYVDNYDGIQSVSTCEQSSSHAPADSVPLPGLPEFSYLGWGHWFTLRDLELATNCFSKDNVIGEGGYGVVYRGRLSNGTPVAVKKILNNLGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRMLVYEYVNNGNLESWLHGELSQYSSLTWLARMKILLGTAKALAYLHEAIEPKVVHRDIKASNILIDDEFNAKISDFGLAKMLGAGKSHIATRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRDPIDYDRPPDEVNLVDWLKMMVANRRSEEVVDPNLERRPSTKELKRALLTALRCIDLNSEKRPRMDQVVRMLDSNEPIPQEERRQRQNHISNNSETEPLRGKSSSGKSDAPENEMRPPRYKNRSFPPK</aaseq>

Gene Sequence

<dnaseqindica>1..92#321..521#649..978#1095..1178#1348..1550#3516..3583#4429..5105#5218..5322#5406..5528#5919..6089#6231..6360#6514..6723#7091..7234#ATGAGTGATTATAGGTCTCATTTGTGGGGCTTCACCGCCAAAAAGGAAGAGGCATACTCAGGAGAAAACGATGAACGCCAGCAGATCTTACAGTAATTACATACGTACTCCCTCCATTTTATACAGTAAGACTTTCTAGTATTATTCATATTCATATATACCTAGATTCATTAACATCTATATAAATATAAACAATACTAGAAAGTTTTACATTATAAAACAGAGAAAGTACTAAACTACTGATATACATAAGCAGTTAACTAATTGGAGTATTATATAGTTAGTTGAAAATGCATCAATATGATATTACTTATTTATAGGTTGATAATAGAAGAGATACAACCTGAGACCTCGGAATTGCCCGATGGAAGGATACAAGTGCATCAAGAGATAGACGCTGCAGTTGCAGAGCTGATAGAACAAGAAGCCCTTGATGAATTAGAGCAACTGGTGGGAGCCCAACTAGAAGCCCCTGCAGATCAGCAAAATCCAGTTGAGCAACATCAAGATGAGGATGACAAGTGAGAATACTTAACATGCATGCAAGCAGATTCATTCATATATTTGATATTCTAGCTAGTCAACTGTACGTTGCACTAGCTGACACAAACTTATATATAACCACTTGGTTTCTACTACATGGTGCAGGCTGAGTTTAGATAATTTGTTGGAACAACATCGTTGGGAGGGAGCTCTGCAGCGGCTGATGCGCATGGTCCGTAATGGCGAAGCCATCAATGGCCCAGTACCTGACGCGCCACCCCAAGACATTTATGTTGCTCATCCCGAGATCGTCATTTTGCTCATGGCAGAAGAGTACCTAAGGCTTATGCGTTCTGGCAATGCTGCTGCTGCTATGCGCTATTATCATGACAAAATTGAGATCATTTATTCGGGAAATACCGGAAGTGCCTTTGTTAACGGTGGTGTTCTGAAAGAAATCCAGGATTGGGTGAATGCAAAGAGAGATACTCCATCGTAAGTGTCACTTGGCTATTAGCACTCATCTTTTCAGTTGTTGATAATCTTCCATATATAATAATATAATTGTATTACGTGTGTGTTGTGCTCATAATTGATCTGTGCTGCTGCAGGGGAAAAGATGAAGCTACGACCCATATGGAGAATACCTGCCAGGCGATCCATGACTATTTGAAGCTTTATTTTCCAGCATACAGGTAATTCAGCTTAATTTGTTGCATTGAATTAACTAACATGCTCCCCTGCCTATTGCAATATACTAGTAGTGCATGCACACAACAATTGATTGATTAATAATTATTTACTGTAGTGTTCTCACTGTCACTGTTGATCGATTTATAAAACCAGTAAATACTGAATTTGCAGGCCACAGATTGGAGGAAAAGTTAGAGGTCACCAAGTAAGCAAGGTTTGGGAGTTCGGGGAGAGGCTTGGAAAAGATGGCGGCCGCTGCTTAGCGTGCCACAAGAAAGTGAAGGGATTCAATGTGACCAAACTCCAGAATCACCTGCAAGGATCGGTTAAAAGGCAAGGGACACAATGCCCGGCAATCAATGACTACATCCTAAGTAGGCTCGAACAGATTTTGAAAGAAATGAACGAAGATCAATAAGAACAAATTAAATTGAACTTTTATATGTTTGTAGGCTAAATTCAACTTCTATAAGTTACAACCGAAAGAATATATTAAACTGAAAATAGGTAGCATATATTCACAGTTATATTTGTTATTTTTGTTATAACTCGTAGAAGTTGAATTTGAACTTGTTTTCATGTTTGTGGAGTGATATCTTTCATATTAATCTATCTTGCCAATTTTCTAAAATTTTAATGGCTATTTAGGTGACATGTAAGAAACGAGGGATGAAAAATACACTTTCTCAAATCCTTCTCTCTTTTCTTCTTCATCTTGGCATGTATATTGATATAGGTTGGACTTAAATGCAAGGCACACATGTAAGGCCACGCACCATGTTTATAGTGTTTTTTAGAGAAAAGACGGTTGCCCGCCTAACTTTAACTTGAAAGCATAAGAGTCTTACAAACAAAGAAACAAAAGAAAGAACAAAAACAAAGAACTGGGGTTTCCAGCTTTCGAATTAGCTTTGAGTGAGCACGCAGGCTCTCGCAAACAACTTCTAACAAAGTGCTAAAATAGAGAGTATCAGTGCTGCTGGCACAGCTCAACATGCCAGGGAAAATGGAAGTCCTTTTTCATGAGCACCAGCAGGCAGAGTTCTCCTTCATGTCACTTCAGATTTCGACCCAAAGCAGAGGCAGAAGACTAGGCTGGGTTACAAGCCAGCCACTCCAGCGTCCAGGCCATCAGAAGACACCAGCTCAGCGTTTGCAGGGTCGGGACTCCCCTCTATCTCTTGCATATTGACAAGCAGAAATCCCCTTAATACATCCAACTCTCCCCTCCATTTCGCAGGCGCCAATCTTCTCCAATGTGATAACAGAGAAATTACTTGATGAGGCAAGTTAATCACATTAGAAAGCAGTTTATTATTAAAGACCCAATTATTTCTCACACTCCACATGCTCCAAAAATTGTTAGCAATACTGAATTCTCTCCCCCCTCCTTCAAACGAAGAAGGTGTAAAATCAGATCTACAAGTGGGAAATCCTATCCTAGTAAAAGGCATCCCTCAAGCAACACCATAGAAACTTGGCAGGAGCACACTTAAACAACAAATGATCCACATCTTCTAACTCCCTACATAGTTTACAATTCAGACTCCCCTTCTATTGCATAATTTTCAACTGTTGAGCTGTTTGAATACTTAATACTATTCTCCTTATAAATTGAGAATATCGTATTAAGTTTTCCTTTATTAGTTTGTATTAGAGCCTAATAAAAAAACTATAAGCGGGTAGAGTTCTTGGGCAGGTCAAGCGGTCACCCTCACTCCACCATTGTCATCTTTACTATCGGTAATTGTTGATATCTATAAAATTAGTTGATCACGGAAAACATTATTAATCGTCTAGGCTTGATAGGGCCGCTCGCTCCTTATAAATCAAGCGAAACTAATCTCACAGCGCGAGTATGTCATCTCAAAATAATAAAAAAGAAAAAAAAAGAGGAAACACAGACACAGACAGAGCGACTGCGCGAGCTCCAGCAGGGAAGCCGTCGGCAGAGACTCCAGCAAACGGACGGCGCCGCAGCCTCCGCCAGGCGGCAGTGGGAGCAGGCAGCAGCTGCAAGGTGGCGGCCTCAAGCGGAGGCGAGCAGTCTCAGGGAAACCAAGCTCGCCGCCGTCGTCCCCATTCTTCCGTCGCAGATTTCGCTGTGACTGGTTCCTTGTGATTGAATCCATAGGAACCGAACCCAAATCTTGGAATTGTTTTTGCAGTGCAAGTCTAATCCTCGGGAGGAAAAAAAAAGAAAGCGTAATAAGGTTGGTTTCTTCTCCATCACTCCCATCACCTACCGACCTCACATGATAACTCCTCTCCTCCTGCCGCCGCTGCTGCCACACTCCACCACTATCGTCGTCTTCTTATCACCCCTACCTCACCTGCAGTCCTGCACCAAGCAAGCAATCTCCAAAGTGCAAGCTTTCTCTTCTTCCTGCGTCTGGATCTCGCTCAGGTATGCGTCCACATTTGCTTTCTTCTTCCTCTCATTCCCATTCCCCCCTACCCTCAGATTTGCGTGGATACCCTTTCCTCTGATCTACAGGTTTCCCCTCTGCCTGCCACTCCCCATGGCTCTGGATTCAGGTCGCTCTTCAGCATTCACTACCGTATTCACTTCTTGAAGGCCAATTTCTGGTTCCTCACCATTGTATCCAATAAAGGTTGGTTACTCTTTCTTTCTTTCTTGTCATCCACTCCAAGTTGACTGCCTCTGTAAATATTCTATCTTTCCAACTGTTGCAATGGTAGCCCATATTTACTAGTATTTTTTTCCCTTGGTAAGATCTAGTGGAAAATTTAACTTACATCTTCAAACGCCTGTAATCATCTATCTTAAGGGCTTGTGTTTATAACTCAATTAATTATGTCAACCTGTAGCTGTTCGATTCTGAACAATAAGTGGGAACGGTAGTTGACAGGTCAGAGCTGCTTCATTGATAATTGATACTGTCCAAATGGCGATGTGTTGTCTTGAACTCATGGTCATTATCTGGTTGCTACCATGTAGCTTTCTCATGACCACTAGTGTTGCCGACTCAACGAGTTGTAGTGTTCCTGACCATTCTGTTAAATTTCCATGCCTTTGTCTTTGTGGCAATCCTAAGAACATTTGATCGGCTAGCAAGCTTATATGTATGTAACTCTTTTTGATGATTTCTTTCTACTTTACTGTCATGGTCTATCAGAATCATATATTATATGTGTTATATGGTCTTGCAGAAATGCACTCTTTTTTTATGTTTGAGGGAAATGGTGATTTGCATTTGTGAGTGACATGTTCTTATCTTCCCCATTTAGGTACTTGATGATCCGAAGATGTCGTCAAACTCCACTCTAACAGACTCTCTTCATGAGAGAACAATTGTTTTTGGCCTGAAACTTTGGGTTGTAATTGGGATATCTGTTGGAGCATCCCTACTTGGTGTTCTTCTCATCCTTATTGTATGCCTCACCATACAAACTTGGATCAAACGGTCACGTAGGACATTCAAGGAAATTCCAATTACCCAAATACCTTCTGCATCCAAAGATATCAAGGAAGTGAGGGCAGTGGAGGAATTTTTGCCCAATGATTTCGTTGTACATGATGGACTTCTACTCGCCATTCAGAATGAACCTGTTGAACCAGTGGATAAAGATGTGAATCAGTTTGCTCAAGAGGACAAGACGATACAAGGAGAAGATAACAGTTCTTCTGTTCCTCTTCATTATGTGGACAACTATGATGGAATTCAATCTGTTTCCACATGTGAACAGTCTTCCTCGCATGCTCCCGCCGACTCTGTTCCCTTGCCAGGCTTACCTGAGTTCTCTTACCTTGGCTGGGGTCATTGGTTCACTCTCAGGGATCTGGAACTTGCAACCAACTGTTTTTCAAAGGATAATGTAATTGGTGAGGGTGGGTATGGTGTTGTCTACCGTGGCAGATTATCAAATGGCACCCCAGTGGCTGTCAAAAAAATCCTTAACAATCTGTGAGTATTTTCCATTTTTTCTTATAACAATTCTTTGGTGATGCAGTGGCAGTGCATGGGTCAGTTTGTTGTCCTTCCTTTTACTTAAGCTATGACTACTTGCCCTGTGCAGAGGACAAGCTGAGAGAGAATTCAGAGTGGAAGTTGAAGCAATTGGTCATGTCCGACACAAGAATTTGGTTCGCCTTTTGGGGTACTGTGTTGAAGGCACTCAAAGGTATGGGTATTATTAGGACTCATTGCTTAGATTATGACCTGTTGTATCTTAACTGAAATTGTTTGTTGTGTGTGGATAATCAGGATGCTTGTGTATGAGTATGTCAACAATGGGAATCTTGAAAGTTGGTTACATGGAGAGTTATCCCAATATAGTTCTCTCACTTGGCTAGCGCGCATGAAAATTCTTTTGGGTACTGCAAAGGCGTGAGTAACTCCTTCACTGAGTCTAAACTATTGCTTCTTGTGGATTCAAATGCCCATTCTAGATCAATTGTTTGCTGTCAACATTGTATTTGTGATTTTGCTTGGTGCGAACTGTGAACTTATTGGGTCTCTATCTATTCCATTAAATGCCTTAGAACTAAAAATGTCGCCTTCTGATTGATTCACACAAGCACATTCAATCTTGATAGCTGCTCTATTAAAAATTGTTGTGCATGTTACAATTTTGACAGCTTTGTGATTTTAGGCTTACTAGTCACTACTATGCACAAGTAGTCGTTGTCTATACTATCATGAATATAAATCAAGTATAGATTGTATCATCTTATTGCTTGGCAAATACTAATTTGGTAAGAACCACCACATTTGCAGCCTTGCTTACTTACATGAGGCAATTGAACCAAAAGTTGTGCATCGTGATATCAAGGCCAGTAATATATTGATTGATGATGAGTTTAACGCCAAAATATCTGACTTTGGTTTGGCCAAGATGCTAGGTGCTGGTAAAAGTCATATTGCTACTCGAGTTATGGGTACTTTTGGGTAAGTTTTTCATGCCTTTGTATAATGAATTGAGGCATGTTCTCTTTGTATTATGTTCAAATCTTAGCCACTGTAATTTCAGAAAAATTCTGTTGGTGCTATTCACTAATGGTACTCAACAATTGTGTTATTATTTTGCAGCTATGTTGCGCCCGAGTATGCTAACAGTGGACTTTTGAATGAAAAGAGTGATGTCTACAGTTTTGGGGTGGTTCTGCTGGAAGCTATTACAGGTAGAGATCCCATTGACTATGATCGCCCTCCAGATGAGGTAATACCTGTTGACATCGATTTCCTGTATTGTTCGGTACCAAGTTATTACATAAAAGCATGCAACTACAGTCTACAATCACTTATGAAGCAATCGAGAAGCTATGAACTTATGATTTGACAAGTACTGTAACACACTACTGATCATTTGTAGGTAAACCTAGTTGACTGGCTTAAAATGATGGTTGCCAACAGACGATCAGAAGAAGTTGTTGATCCAAACCTGGAGAGAAGACCATCGACAAAGGAGCTCAAACGTGCCCTTTTGACAGCTCTGAGGTGCATCGATTTGAATTCTGAGAAGAGACCAAGGATGGACCAGGTGGTCCGGATGTTGGACTCTAATGAACCCATTCCTCAAGAGGTTTGATTCGTGACAAAAATATACATATGATAAGTGACATATTCATATAGCTGTGTGCATATCAGATGCAAATGCTGTAGCTGTAAACTCTTCCTTTACCTAAAGAGTACGATTAGTGATTTACCTGGAAATCATGCATATCTGCTATATTGTGTTATAAGTACATCCAAAGTTCATCTCACAGTAAAATTAGTGACATATGGACCACGTGAGCAATCTTATTTGATTATATCATGTATACCTGTCTTATCAGCATTATCAGACATAGAGAGCATTGCATAACGTGGTATTAATGTTTATCATAATGAAATCATGGATTTATTATATCATTGCCTCATGAATTAAACACTTGTCAACTGATTTGCAGGAAAGAAGACAACGACAGAACCACATCTCTAATAATTCAGAAACCGAGCCATTAAGAGGCAAGAGCAGCAGCGGCAAGAGTGATGCCCCTGAAAATGAGATGAGGCCACCTCGGTATAAGAATCGATCATTTCCCCCCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036785

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