BGIOSGA036823

From RiceWiki
Revision as of 08:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036823| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036823, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036823

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036823, complete gene.

LocusTag

OS11G0102650

Ensembl Transcript ID

BGIOSGA036823-TA

Ensembl Protein ID

BGIOSGA036823-PA

Length

3993

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:174286..178278

Sequence Coding Region

178069..178278,177374..177876),complement(175907..175985,175274..175489),complement(174579..175081
,174286..174406

Genome Context

<gbrowseImage1> name=IndicaChromosome12:174286..178278 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:174286..178278 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAAAGCCACAAGAAGGTTGCTGCTGTGAAGCCTGTGGCTTCCAGGCCTTCTTCCAGATTGAGGTCCTTCTCAATGCTCCAGGAAGACTCCACTGCTATTGATTCTCCTCGGGTTACTTCCCTGGAGGAGATTATATTAAGGCGTCCAAAGGCAACGCGATTCACACACCCATTGAGTAATTCATCGACAGAAATTGCTGCAACCAGACTAGAAGACAGTGGAACACATACAACATACGATCAAAAGAAAGCAGAAACAGGAAAGGGGGCCTGTTGGGACAATTTGACAGTGTCCCAGAGTGTCAGGAAGCCAAATGTCAGTGCGAAGAACAGTTTGTCCTATGATGGCTACAGCTGGAGGAAGTATGGGCAGAAGCAAGTGAAAGGGAGCGAGTTCCCACGGAGCTACTACAAGTGCACTCACCCAACATGCCCTGTCAAGAGAAAGGTGGAGATGACACCAGATGGCTGGATTGCTGAAATTGTATACAACGGTGAGCACAACCACCCCAAACCTCATCCTCCAAGAAAGCCAACATTATCAACAAGTGTGGAGACTCTGGTTGCCACTAATGATGCTGGATTAGAAAACAAGTTAGAAGGATGTGACCAAGCTATTGGTTCTGATGCTGTTGTTGAAGCATTAAGAGGTGGCTGTCACTGCTTGGATGGATTTAGAAATGGTAATGAGATCAGTGACTGCAAGAAAAGCCCTTCAACTCAACTTCCTTCTCACCCTTCGATTGCATCTACCAGTCTGCCTGTCACAGCACAAGACTTTGGGACTTGGTGCGATATGCAAAGCCACAAGAAGGTTGCTGCTGTGAAGCCTGTGGCTTCCAGGCCTTCTTCCAGATTGAGGTCCTTCTCAATGCTCCAGGAAGACTCCACTGCTATTGATTCTCCTCGGGTTACTTCCCTGGAGGAGATTATATTAAGGCGTCCAAAGGCAACGCGATTCACACACCCATTGAGTAATTCATCGACAGAAATTGCTGCAACCAGACTAGAAGACAGTGGAACACATACAACATACGATCAAAAGAAAGCAGAAACAGGAAAGGGGGCCTGTTGGGACAATTTGACAGTGTCCCAGAGTGTCAGGAAGCCAAATGTCAGTGCGAAGAACAGTTTGTCCTATGATGGCTACAGCTGGAGGAAGTATGGGCAGAAGCAAGTGAAAGGGAGCGAGTTCCCACGGAGCTACTACAAGTGCACTCACCCAACATGCCCTGTCAAGAGAAAGGTGGAGATGACACCAGATGGCTGGATTGCTGAAATTGTATACAACGGTGAGCACAACCACCCCAAACCTCATCCTCCAAGAAAGCCAACATTATCAACAAGTGTGGAGACTCTGGTTGCCACTAATGATGCTGGATTAGAAAACAAGTTAGAAGGATGTGACCAAGCTATTGGTTCTGATGCTGTTGTTGAAGCATTAAGAGGTGGCTGTCACTGCTTGGATGGATTTAGAAATGGTAATGAGATCAGTGACTGCAAGAAAAGGCTTTTCCGTTTTGGAGTGAGATTTCATGATGGTTCATGTAAGAGAATTCTGGCACAACCGCATAATATAATTAATTTAGGGTCACATTTGGTAGCTGAATATGTTCAGGAAAAGCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MQSHKKVAAVKPVASRPSSRLRSFSMLQEDSTAIDSPRVTSLEEIILRRPKATRFTHPLSNSSTEIAATRLEDSGTHTTYDQKKAETGKGACWDNLTVSQSVRKPNVSAKNSLSYDGYSWRKYGQKQVKGSEFPRSYYKCTHPTCPVKRKVEMTPDGWIAEIVYNGEHNHPKPHPPRKPTLSTSVETLVATNDAGLENKLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDCKKSPSTQLPSHPSIASTSLPVTAQDFGTWCDMQSHKKVAAVKPVASRPSSRLRSFSMLQEDSTAIDSPRVTSLEEIILRRPKATRFTHPLSNSSTEIAATRLEDSGTHTTYDQKKAETGKGACWDNLTVSQSVRKPNVSAKNSLSYDGYSWRKYGQKQVKGSEFPRSYYKCTHPTCPVKRKVEMTPDGWIAEIVYNGEHNHPKPHPPRKPTLSTSVETLVATNDAGLENKLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDCKKRLFRFGVRFHDGSCKRILAQPHNIINLGSHLVAEYVQEKQ</aaseq>

Gene Sequence

<dnaseqindica>1..210#403..905#2294..2372#2790..3005#3198..3700#3873..3993#ATGCAAAGCCACAAGAAGGTTGCTGCTGTGAAGCCTGTGGCTTCCAGGCCTTCTTCCAGATTGAGGTCCTTCTCAATGCTCCAGGAAGACTCCACTGCTATTGATTCTCCTCGGGTTACTTCCCTGGAGGAGATTATATTAAGGCGTCCAAAGGCAACGCGATTCACACACCCATTGAGTAATTCATCGACAGAAATTGCTGCAACCAGAGTCAGTTCGACACGAAATTCAACTTCTCTGTTTCCTGGAAAGAAATTTCATTTTCTTTCTGACAGTTACATAATTTTGCACCTTCTTTTAAATGATGCTTTTTATAATTATACATCTGTCCATTAGATTATTTTGAACCTACCTTGGACATGATCATATGGTCATTTTCTAACAACATGCTGAACTTTTTAGCTAGAAGACAGTGGAACACATACAACATACGATCAAAAGAAAGCAGAAACAGGAAAGGGGGCCTGTTGGGACAATTTGACAGTGTCCCAGAGTGTCAGGAAGCCAAATGTCAGTGCGAAGAACAGTTTGTCCTATGATGGCTACAGCTGGAGGAAGTATGGGCAGAAGCAAGTGAAAGGGAGCGAGTTCCCACGGAGCTACTACAAGTGCACTCACCCAACATGCCCTGTCAAGAGAAAGGTGGAGATGACACCAGATGGCTGGATTGCTGAAATTGTATACAACGGTGAGCACAACCACCCCAAACCTCATCCTCCAAGAAAGCCAACATTATCAACAAGTGTGGAGACTCTGGTTGCCACTAATGATGCTGGATTAGAAAACAAGTTAGAAGGATGTGACCAAGCTATTGGTTCTGATGCTGTTGTTGAAGCATTAAGAGGTGGCTGTCACTGCTTGGATGGATTTAGAAATGGTAATGAGATCAGTGACTGCAAGAAAAGGTATGCTTATGCTGTAATTTTCATTCAGAACTTACTAATGTTTTTTTGTGCCAAAAATGTGCAAGTGGTTGCTTAAAATATCAAGTAGCATATTATGATATTTACGTTACAGACCCACAGCCTCCTTGGAGGACACTCTTAGATGATTGCTGTGAAATTGTTGTGTGCCTAGGCTTTTCCGTTTTGGAGTGAGATTTCATGATGGTTCATGTAAGAGAATTCTGGCACAACCGCATAATATAATTAATTTAGGGTCACATTTGGTAGCTGAATATGTTCAGGAAAAGCAGTAATGTTGATAGCTGAATAGGTATTGATTGGCAATGAATTCATTCACTGTAAAGTTGACAATCTATGTCGTGAAATTCATGCACTTTGTAGGACCTTGCTGACTAATCTATTCAGAGGAAAAAAAAATCAGCNACATGAAAATAGCTGCCCTAGAATGCCTCATCCAAGAATTGTTCCATGCCACTGTATATCAAGGTTGAGGTAACTGCAAACTAGGAAGGACTGCCTTGTTAACTTACTGATATGAAAAAAAGAAAAAGAGATACAGATTTGTGTATATAAGTCCGCTCAAAATTCCATATGCTGAAGAACACATGCAGTCGTACTTGCGATTGTCTGTGCTTGTTTGGAGTTAGTACACTTGTTTAACCCCTGAAATGTAATTGTCGCTTCACCTTTTGTATTTTCTGTAAGAAAATTGTCAATCAGTGCTACATAGTATAGGTTTGTGTCATGTGTTGCTACGATGTTAAGTGCTTGGATGTGCATTGCAGGAGTAATTAGAGATGCAGCACGCGCGAGTACGTGGATGATCAGAGGGAAGGCATAATCTCGAGATCAATCTACTCATCTTGGAACAATACCAGTAGCATTGGCAGCAATTATTGGCATGTTAACGTGGTATACTCCTCAAACAAAACAAAAAGGGGAATAATGTCAGTGAACTGAGTGAGGTGTTAATAGGCAATTGCTAGGCCTCCGAACTAGTGTGCTGTCACTCTACTAGCTAGATTAGGCATAAATTACCAAATGATACTGTGACAAAACTGAAATGTAACCACTCCAGAATCTTGGTTTAACACATTGTTTATGTGCAAATTGGTTTTATCAAATGATACCGCTGGGAATTGTTGTTGGCAACTAATAAGTGAATGCTGCTCAAAGGAGTTACAAGAGGAGCAGGAAACTGGATTTGGAGAGAACTGCTGCTGCAGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGCAAGGAGGGCAGCTATCTGGCATCTGCCAGTCTACCTACCACTTCCGGACCTAACAGTCATACATGCATCCTTAACTATCTTCCTTTTCTCCTCTCCTTATCAGCCCTTCAACTCAACTTCCTTCTCACCCTTCGATTGCATCTACCAGTCTGCCTGTCACAGCACAAGACTTTGGGACTTGGGTATGTGAACTATGATTCTTCTTCCTTTCTCAATTTTTGCTTTGTACATGCACAAGAGGAAAACAAGTAAACATCTTGAAATAAAGCATTATTACTTCAGCATGTTCTGCATGTTTTGTTGCTTGGTCTCAACCAGGCTTCAAAATTCAGCTATAGATTGCATAAATTCACTTTTTTTTTTCCATGCATGCTATTTTGTTCCAGTATCACTCTTCTCTTCTTTTTTTTTGGTCAATTCCTCAGTTTTACATCTAGCTCACTATGAGTTTCCCTCTGTTCTCTTTTATTCATTCACCACGTAAAGGTAGCAGCAGAGGGGAGCACATCCATGACTTGTGTTCATAAATTTTGTGTTATTCTACCTTCTTTCTTTGTCATTTCACTTTGGTACATAAACTGTGCTAAAAATTTCACCAGTGCGATATGCAAAGCCACAAGAAGGTTGCTGCTGTGAAGCCTGTGGCTTCCAGGCCTTCTTCCAGATTGAGGTCCTTCTCAATGCTCCAGGAAGACTCCACTGCTATTGATTCTCCTCGGGTTACTTCCCTGGAGGAGATTATATTAAGGCGTCCAAAGGCAACGCGATTCACACACCCATTGAGTAATTCATCGACAGAAATTGCTGCAACCAGAGTCAGTTCGACACGAAATTCAACTTCTCTGTTTCCTGGAAAGAAATTTCATTTTCTTTCTGACAGTTACATAATTTTGCACCTTCTTTTAAATGATGCTTTTTATAATTATACATCTGTCCATTAGATTATTTTGAACCTACCTTTGACATGATCATATGGTCATTTTCTAACAACATGCTGAACTTTTTAGCTAGAAGACAGTGGAACACATACAACATACGATCAAAAGAAAGCAGAAACAGGAAAGGGGGCCTGTTGGGACAATTTGACAGTGTCCCAGAGTGTCAGGAAGCCAAATGTCAGTGCGAAGAACAGTTTGTCCTATGATGGCTACAGCTGGAGGAAGTATGGGCAGAAGCAAGTGAAAGGGAGCGAGTTCCCACGGAGCTACTACAAGTGCACTCACCCAACATGCCCTGTCAAGAGAAAGGTGGAGATGACACCAGATGGCTGGATTGCTGAAATTGTATACAACGGTGAGCACAACCACCCCAAACCTCATCCTCCAAGAAAGCCAACATTATCAACAAGTGTGGAGACTCTGGTTGCCACTAATGATGCTGGATTAGAAAACAAGTTAGAAGGATGTGACCAAGCTATTGGTTCTGATGCTGTTGTTGAAGCATTAAGAGGTGGCTGTCACTGCTTGGATGGATTTAGAAATGGTAATGAGATCAGTGACTGCAAGAAAAGGTATGCTTATGCTGTAATTTTCATTCAGAACTTACTAATGTTTTTTTGTGCCAAAAATGTGCAAGTGGTTGCTTAAAATATCAAGTAGCATATTATGATATTTACGTTACAGACCCACAGCCTCCTTGGAGGACACTCTTAGATGATTGCTGTGAAATTGTTGTGTGCCTAGGCTTTTCCGTTTTGGAGTGAGATTTCATGATGGTTCATGTAAGAGAATTCTGGCACAACCGCATAATATAATTAATTTAGGGTCACATTTGGTAGCTGAATATGTTCAGGAAAAGCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036823