BGIOSGA036829

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Revision as of 08:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036829| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036829, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA036829

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036829, complete gene.

LocusTag

OS12G0101000

Ensembl Transcript ID

BGIOSGA036829-TA

Ensembl Protein ID

BGIOSGA036829-PA

Length

6892

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:55740..62631

Sequence Coding Region

55740..56279,56383..56540,56652..57955,58295..58389,59760..59901
,60687..60715,62114..62257,62350..62631

Genome Context

<gbrowseImage1> name=IndicaChromosome12:55740..62631 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:55740..62631 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACTTGCCGGCTTCTTCGACCTCAGCATCCTCCCCGACGACTCCAAATCTACCACCACCAACACTAGCATAATCGCCCGTGCCCTTGACCTCGGCTACTCCGCCGTCGCGCTCGATCACCCTCACCGTGGCCTCCTCGCTGACTCCCATGCACCCATTGCCTCCTCTCTCCTGCTGCCGCCCTCTGCCTCCCTCCACCACCGCCGACATCCCTTCCTACAGTACACGCGCATCACCCTCTCCCTCGACTCCGCCGCCGCCTGCGCCTCTGCCCTAGCCCCCTCCGCCGCCCGCCTCCTTCGCACCTATGACATCGTCGCTGCGCGGCCGCTCACGCAAGCCGCCTTCGACCACCTCTGTCATGCCACATTTGACCACCTTGATATCGTCTCCATCGACTTCTCCCACAAGCTGCCCTTTCGCCTCAAGCTCCCCATGCTCAAGCTTGCGCTGCAGAGGGGCCTGCACTTGGAGATCGCCTATTCTCCCCTCATCGCCGATGCTGCTTCAAGGAGACAGGCCGTAGCCGAAGCCAAGCTCTTGGTGGAGTGGACTAAAGGAAAGAATCTCATCATCTCAAGTGCTGCTCACACTGCTTCTGAAATTAGAGGACCCTATGATGCCATAAATTTATCTTCTTATTTGCTTGGCCTTTCTACCCAACGAGCCAAAGCTGCTCTATCCGTCAACTGCAGGTCACTGATTTCCAAGGCTCTGAGGAAAAAGCACTTCTACAAGAAAACCATTAGAATCGACAGGCTGTTACCAAATAAGCAGTTGAATTCAGCAAACTTCAAGCTTGCTGACTGGATTGGTTGGGATCCTATGCCTCATGAAGTAGATCTGCTATCTTTGGACGTTAATCCAGAACCTTCTTCCGACAAATATGAATTGCTATCTTACAAAGGAGAACCGCAATCTCTTGATATAAATCCAGAACCTTCTGCCAATAAAGATGAACTACTGTATTTACCCATAAATGCTCTCACCGAAGCATCAAGTCATGTACCTTATGATGGTGATGAGTCCCTCTTTGTCGAGCAGCAAGAGCAGTTAAGCCATGGCAACGAAATCATATTCCCAGTTGAAACTCAAGAAGGGCCTGTGCAAGTTAGCAGAGGTGAAAGTCTTATGACTTGTGTATTGTCTACCTTGCCAGCATCTTGTGAGCAGCATAGTGTTGCTACCAATTTGGATAATCCTGGAAACAATGAAACTGTTATGGCTCATGATGTGCAGACTGCTGCTGTCTCTTCCTTTGATCTGAAAGGCATTGAGAAACATGTTGAATCTCTGCATGATGCTATGGAACTAGATGGTACAGAGTCAAGTAAAATGAACCTCATTGCAGATTTTACCGCTCCCTTATCTTCTGATGATAGCTTGGTGTGTTATGCTATTCCATGTAGTATGGAACTTTCTGACACGAGTGTCGTGAATAAGTGCCCTCACCAGTCTACTGGCTTCCCAGATTATGCTAAAGCTTGTACAGAATGTGACTCTGGGTTGACCTCCTGTGAGAGGGTTGATAGGATATCACAGGATCATGACATTCTTTCTGGTTCCAGTATTTACTCTAAGAATAAGGACCTCTACTCTTACAGTGACATCTCAGTTTTTTCTGAGACTCACAAAGATTTTGCAGAACCGCTAGAGTTGCCTCCATGTGGGAAAGATGATGAGGCGCCACCAGATCTTGCAGCTCAATTGCACTGTAATTCATGCAAGGATGTTATGATGCCACCGCAAGTTATAAGCGATGAAGTAGAGCCAGTTGACAGAGGAGCAACTATTTTAGTGGAACATACTCCCTGTGGTCCAGAGACTGCCTTGACTGCTTTTCTTTATGATAAAGGATCCATTGATACAACCAGTAAAACTGATGAGTTGGCAAAGCAAAACTCAAACTCTCTGGAGGGAGATGTTGCTAAAATACATGAACAACTACTAAACTATTCTTATGCTAGTGGTGAGGTGGAGATATCCCTAACTAGATCAGAAAAGCGAACCAAAAAATTAAGGTCGCAACATCCGATTTATGTTCCTTTCTTGGGCTTCCTCAAGTCTGTGTCCTTTAAGAAGAAAGCATCCAAGGCCGAAGCGGGTGAACGTGTAGCTGGTAGAGCACCCAGTAGAAGTGCCACCCGCCTAGGGATTGCATCCTGGGAGCCACATTTGTGCTCACCTCCCTGTGCTACAGTTGCAGAGGGTCCCAGGCTAGCAAGAGCATGTGCTGGTTACATCCAAAAGGAAATCATAGCAACTGGCTGGAGCTCATCATCATCTTCGTCGTCGTCGCTCCGCCGGGTGTTGAGCACCGGAGGAGGCCTGGTGGAGGAGGAGCGGCGGGAGCGCATTGACAAGTACCGGAGCAAGCGCAATCAACGCAATTTCGACAAGAAGATCACCTACGCTTGCCGGAAGACGCTCGCGGACAGCCGGCCGAGGGTGAAGGGCCGCTTCGCCCGTAACTCCTCCGACGACGCTGCTGCTGCTGCTGCAGCTCAAGTCGAGGTGTCGCCGGCGACGAATAATAATGTGCCGGAGTGGTGGCCGGCAGTGCAGGAGGCGCTGGCCAGGCAGGAGCAGGAGGCGGCTGGCCTCCATCTCTGCGACACCGCCGACGATGACCTGCTAGCCGCCTACCTCGGCGTCTCCTCCATCGATCTCTACTCACCCCGCGGCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MALAGFFDLSILPDDSKSTTTNTSIIARALDLGYSAVALDHPHRGLLADSHAPIASSLLLPPSASLHHRRHPFLQYTRITLSLDSAAACASALAPSAARLLRTYDIVAARPLTQAAFDHLCHATFDHLDIVSIDFSHKLPFRLKLPMLKLALQRGLHLEIAYSPLIADAASRRQAVAEAKLLVEWTKGKNLIISSAAHTASEIRGPYDAINLSSYLLGLSTQRAKAALSVNCRSLISKALRKKHFYKKTIRIDRLLPNKQLNSANFKLADWIGWDPMPHEVDLLSLDVNPEPSSDKYELLSYKGEPQSLDINPEPSANKDELLYLPINALTEASSHVPYDGDESLFVEQQEQLSHGNEIIFPVETQEGPVQVSRGESLMTCVLSTLPASCEQHSVATNLDNPGNNETVMAHDVQTAAVSSFDLKGIEKHVESLHDAMELDGTESSKMNLIADFTAPLSSDDSLVCYAIPCSMELSDTSVVNKCPHQSTGFPDYAKACTECDSGLTSCERVDRISQDHDILSGSSIYSKNKDLYSYSDISVFSETHKDFAEPLELPPCGKDDEAPPDLAAQLHCNSCKDVMMPPQVISDEVEPVDRGATILVEHTPCGPETALTAFLYDKGSIDTTSKTDELAKQNSNSLEGDVAKIHEQLLNYSYASGEVEISLTRSEKRTKKLRSQHPIYVPFLGFLKSVSFKKKASKAEAGERVAGRAPSRSATRLGIASWEPHLCSPPCATVAEGPRLARACAGYIQKEIIATGWSSSSSSSSSLRRVLSTGGGLVEEERRERIDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSSDDAAAAAAAQVEVSPATNNNVPEWWPAVQEALARQEQEAAGLHLCDTADDDLLAAYLGVSSIDLYSPRGH</aaseq>

Gene Sequence

<dnaseqindica>1..540#644..801#913..2216#2556..2650#4021..4162#4948..4976#6375..6518#6611..6892#ATGGCACTTGCCGGCTTCTTCGACCTCAGCATCCTCCCCGACGACTCCAAATCTACCACCACCAACACTAGCATAATCGCCCGTGCCCTTGACCTCGGCTACTCCGCCGTCGCGCTCGATCACCCTCACCGTGGCCTCCTCGCTGACTCCCATGCACCCATTGCCTCCTCTCTCCTGCTGCCGCCCTCTGCCTCCCTCCACCACCGCCGACATCCCTTCCTACAGTACACGCGCATCACCCTCTCCCTCGACTCCGCCGCCGCCTGCGCCTCTGCCCTAGCCCCCTCCGCCGCCCGCCTCCTTCGCACCTATGACATCGTCGCTGCGCGGCCGCTCACGCAAGCCGCCTTCGACCACCTCTGTCATGCCACATTTGACCACCTTGATATCGTCTCCATCGACTTCTCCCACAAGCTGCCCTTTCGCCTCAAGCTCCCCATGCTCAAGCTTGCGCTGCAGAGGGGCCTGCACTTGGAGATCGCCTATTCTCCCCTCATCGCCGATGCTGCTTCAAGGAGACAGGCCGTAGCCGAAGCCAAGGTTGGCCATCTCTTGCTCTTCCTTATTATCTTCATATATCTCTCTATATCGTAACACTAATACTTAGTTCCTTAGTAACCAAAGCCTTTTCATCTTTTTTCAGCTCTTGGTGGAGTGGACTAAAGGAAAGAATCTCATCATCTCAAGTGCTGCTCACACTGCTTCTGAAATTAGAGGACCCTATGATGCCATAAATTTATCTTCTTATTTGCTTGGCCTTTCTACCCAACGAGCCAAAGCTGCTCTATCCGTCAACTGCAGGTCACTTGCACATCTCTTATATGATATCCGGAGCTTATTTTAGAAAGCTAGGCAGTTTAGTCTGAATCATGATGCTGTGCCATGTATTCTAAGCCATTTGTTCATTCTCAGGTCACTGATTTCCAAGGCTCTGAGGAAAAAGCACTTCTACAAGAAAACCATTAGAATCGACAGGCTGTTACCAAATAAGCAGTTGAATTCAGCAAACTTCAAGCTTGCTGACTGGATTGGTTGGGATCCTATGCCTCATGAAGTAGATCTGCTATCTTTGGACGTTAATCCAGAACCTTCTTCCGACAAATATGAATTGCTATCTTACAAAGGAGAACCGCAATCTCTTGATATAAATCCAGAACCTTCTGCCAATAAAGATGAACTACTGTATTTACCCATAAATGCTCTCACCGAAGCATCAAGTCATGTACCTTATGATGGTGATGAGTCCCTCTTTGTCGAGCAGCAAGAGCAGTTAAGCCATGGCAACGAAATCATATTCCCAGTTGAAACTCAAGAAGGGCCTGTGCAAGTTAGCAGAGGTGAAAGTCTTATGACTTGTGTATTGTCTACCTTGCCAGCATCTTGTGAGCAGCATAGTGTTGCTACCAATTTGGATAATCCTGGAAACAATGAAACTGTTATGGCTCATGATGTGCAGACTGCTGCTGTCTCTTCCTTTGATCTGAAAGGCATTGAGAAACATGTTGAATCTCTGCATGATGCTATGGAACTAGATGGTACAGAGTCAAGTAAAATGAACCTCATTGCAGATTTTACCGCTCCCTTATCTTCTGATGATAGCTTGGTGTGTTATGCTATTCCATGTAGTATGGAACTTTCTGACACGAGTGTCGTGAATAAGTGCCCTCACCAGTCTACTGGCTTCCCAGATTATGCTAAAGCTTGTACAGAATGTGACTCTGGGTTGACCTCCTGTGAGAGGGTTGATAGGATATCACAGGATCATGACATTCTTTCTGGTTCCAGTATTTACTCTAAGAATAAGGACCTCTACTCTTACAGTGACATCTCAGTTTTTTCTGAGACTCACAAAGATTTTGCAGAACCGCTAGAGTTGCCTCCATGTGGGAAAGATGATGAGGCGCCACCAGATCTTGCAGCTCAATTGCACTGTAATTCATGCAAGGATGTTATGATGCCACCGCAAGTTATAAGCGATGAAGTAGAGCCAGTTGACAGAGGAGCAACTATTTTAGTGGAACATACTCCCTGTGGTCCAGAGACTGCCTTGACTGCTTTTCTTTATGATAAAGGATCCATTGATACAACCAGTAAAACTGATGAGTTGGCAAAGCAAAACTCAAACTCTCTGGAGGGAGATGTTGCTAAAATACATGAACAACTACTAAACTATTCTTATGCTAGTGGTGAGGTGGAGATATCCCTAACTAGATCAGGTAAGATATGAAGTAGGCATTGTTAAACAGTTTGAATTTGTAACCTTTTGTGTTTACTGGTGACTATTCTTGAGATTTTTCTAATTATGAAGGCTATTTTGTTCTCTGTCATGTCCTTTCATGCTTGCAGCTAGTATCAAGTCAACAGTGAAATGATTCACTAGGTTTTGAGGAAGATCAATTTAAGGGATCTATTGTTTCATTGTGTTTGAACTTAGCTTAACATGTATTAGTTTATATTAGAAGTATTGAGCATTGATTTTAGTATGAAGACAATCAAAGAAAATTGAGATTTATGCATATCTTTTAAGCATATCTGAAGTTTTGTTGGTTTTGCAGAAAAGCGAACCAAAAAATTAAGGTCGCAACATCCGATTTATGTTCCTTTCTTGGGCTTCCTCAAGTCTGTGTCCTTTAAGAAGAAAGCATCCAAGGTAAGAAGCCTGTTCGTTTTTTTATACCAGATTATAGATTATGTTGAGTCATGAGGGATATTGCTAACATATGTGCACGCTGAATCCTGTATCAGGTATGGTTTTTTGAGGATACCGCTAAACACGAATTCCTTGTCTGTTATCAGTGTGATATGAATAATGAAAAACAAGAGTTGGTACTTGACTTCTTTTTATATTGTATTGATAGAGATATTGTTGCTTGAACTGTGTGACAGGATACTCTTTATTTAGATAATTACAAACTCATGTAGTTATAAGTTTAATGTGCCATGATGTCACGTGGGAGCTGTTCTACAACCATAGCCAGTCTGCTTAGGTAGGCCTCTCGAAAGTCAGGTTTGGCTAAGACTAGGTAACCTTAGCTCTAGCTCTCTGCAGGCTTGAGCCAATCTAGAGTTGAACAAGCCTAAGTTGAGGTTTGAGCTTACATAAGCCCGAGGTGGACTAGATGAGACTTGATAACTATAAAGTTTTAGGTACTCCAGCATACATAGGCTTGAGTTCAGCTCTGTAAGGATAGTTCAACTTTAAACACACATGCATGAGCATATCACAAGGCTATAAAACAGTACTACCTCCGTCCAAAAATAAGGGATTTTTCCCATATAATTACTTGGGTAAAATCCCTTATATTTTGGGACAGAGGTAGTATATATTAGTGTTATGGTATAAACATGTGATTGAAGACTTATTGAGCGAACTGCATGCTTAGCTCAATGAGTGCTTGAGCCTGTTTTGGGCTCAAGCTCAGCTCCACTGAGTCTGAGTCAAGCTCGCAATGCTTGTGAAGTCTGAACGCTCATTTGACAGCCCTGCCCAAGAGGAATGCATCCTTTATTTAACCAAAAGTTTAACCGGACCATATCAGATTAGTAGCATTAAAGTTCCAGTTAAGTCATCCTTTATTTAGTGTTCAAAGGGTGGTGTTTGCTTAATCTTAAGTACAAGGTTAATCAGACAATTATGTCTCCCTGTTCCTTATACTGTCCCTCCCATGATTTCCTAGCCACAGCCGACAAGACCGATGCAACCTGGTCCTTGCTCATCATGTCAAGAGACCACAACTATGTGCTGTGTTCTTTGTTCCAGGGACTGACAAATCATATTTTATCACGTATTGATTATGGACGTGGTACTGCCCTATTGTTACCTACAAAATTGGATTCTAGTACGCGAAATCTTAGAAAAAAAAGCTCTGATGATGCTGAAAATATGGCATCTGGATCATAATATGAATCTCGTGATCTCACTACTTTTTCCCTCCCTTCTGCTAATTTTTATGGATGCAGTTTTCAAGACAGTGTAGACCTGGTGTGGCTTGTTTAGAATAAAGATAATTTTTATTTAAGGCCGAAGCGGGTGAACGTGTAGCTGGTAGAGCACCCAGTAGAAGTGCCACCCGCCTAGGGATTGCATCCTGGGAGCCACATTTGTGCTCACCTCCCTGTGCTACAGTTGCAGAGGGTCCCAGGCTAGCAAGAGCATGTGCTGGTGAGGTTCCTGCCTGGCTAGGTTTTGATGGGACCCCTTCTTAAAAGCTAAGTCAAGGGGGTCGTCCTTCCCCCTTGATCAAGGTTTTTTTTTTTTGATTTAATGCCGAAAGAAATAGAAGCATGAATTCAGTATGCAGTTTCAATCTTTCAGATTTGATATGGAAAAGGTTTTAGAGACCATGAAAGCAATAGAAGGCCTCACCCCCACAGATGCACCCAAATGAAGATGTGGAGACTGAACAAATAATTATATCATTCATGCCACTAGACTGAGGTCTTACCAGCCTTCATCAATGTCGGGTCTCATTTGCCTAAGATCATGACATTTGAATTGACTCATTGGGTGTTCCTAACTTCACACTACATACGAATAGTGTTGTACCTTAAGATACCTGTAGGAGTAAATTAGTGAAATTGCTGACTTTTTGTCTCTTAATGCCAATTCTTGGTACAATTGCATTTCTGTCTAGTCTGTTACTCAATTCTGTAAATTCTTTATACATATCAACATAACAATTATTGCTTTCCACTCATGCTATAGTGGTGCGACTATTCTTAGAGTTGACCTACAAGAAGAAAAAGTAATATCTACAAAAACTGCACACTATCATAATAGTCCCACTTGTTTTCACTATCTTTACCCCCACCTTTCCTCTTTCCCTCTCGCCTTTTGAATTTCATAATTCCCATCTACTGATTCTTGTAATTTCTTTTTCTGTGCACCTAATTATCAATGCTTAATTCATCTGATAGTGATGGTGCTCTTAATTGAAACCAATGCAGGTTACATCCAAAAGGAAATCATAGCAACTGTAAGAACTTACAATTTAAGAATTTTGCTGCACATGAAAGGAAAATGAATCTATATGCAAGGTTACTCCGTGGTGCCCTTTGACTTTATCCTGTCGGGTTGGCTAGGCCTACTTGAGGTTGGTCGAGCTCAGTTGTCAGGATAAGTCAACAACTCAACACGCGATTCTTAAGTGGGCTACTGTAGGGATTAATCAGAAGCTGTGCCATAGCAGAAGGCAGACCTGTGGTGGATTTAGGACACTTCCAGTTACCTCACCAACAAATTGCCAATTGAAAACTGCGTCCTGGATCTAGAGCAGCAAACTTCTGTCCAATAGATGGTTGAAAAACAACACAGATTCCTGTGGATCTCTATCTTGTAGGCTGCAATGTTCAAAGGGGACATGATTGTTCCTCACCAAAATCTTGGGAGATGTCACTTTTGAAAAAGCTTACCATAGGATTGCTGCGGACTTTGGAGGGAGAATCTTATCGAGGACCGTCTTTTATACTTGTATCTAATCATGATCAGCATTCAGTGAGCTTCCTGCGCATCTTTATTTTCATTTATCCAATTTTGCATATCCTTGCCTTTATGACTGTATCCGAGCATCCTATCGTTAATGATCAGGGATGACAAAACCTTGGAATCAGCCAAATTGGCATATCCAACCCCAGAATAGTGAGTTTGGATTCTTGCAGCAAAGTGGTAGGGCCTGATGTTAATTTGTGGTGAATAGCAATTTGAGCAATAGTGCCAGTGTTGAACAATGGCATATCCCCTGGTGTACAGCAGGGAATATGCATGGTTGAAGGATGTGAGTGGAAGAGGTAGGAGATATACCCAACTTGTCCATGTCTCCTTGAATGGTCTGTACTGGCTGCCTTGGCCGTAGTGTTGGTGTTGAGATTGCCGGGTAGCTTGTTGATTGTGGCACTTTTTATACTAATCGATTGATGAGATAGATTCTCTTTACGAGAAAACTTGTATTGATTAGTTGCTGTTGGGCTGATGTATGTGTTGTGCGCAACAGCGAGCTTCCATTCTGTCTGTCATGTAGGAGTATGCTAGTGGCAGTGGTGGCTATCAGTCGTTTTGATGCTTGTACTAGTACCTTACTAGCCTGCATACCTTTGACATGCCAGCTTCCTTCTCAACATTGCAAGGAAATACAGGGATATGCTATATACATGCACGATCATCAAATCATACCCTATCACAAAGTGGAGCAGCTCATGTCAAATCAGGGCTTAACCAAAATTAAGAGTTGACTCCTTTGAAGAGATCAGATCAAATTGAAGAGAAGCTATAGTGGCAGTGGAAGTGGAGGCCAAGGCGGCCATATATAAATGGCCTGATCAATGTATCTACCTTCACGTACGTACCTGGACTAACTACCACAATGTATCATCATCAGGGCTGGAGCTCATCATCATCTTCGTCGTCGTCGCTCCGCCGGGTGTTGAGCACCGGAGGAGGCCTGGTGGAGGAGGAGCGGCGGGAGCGCATTGACAAGTACCGGAGCAAGCGCAATCAACGCAATTTCGACAAGAAGATCACCGTAACTCTTTCATTTTAATCATCAATTAACACAGATCCTTCTCTCTCATTACTTAGCTAATTAATGTGCATGGTTGCTTTAATTAATTGCAGTACGCTTGCCGGAAGACGCTCGCGGACAGCCGGCCGAGGGTGAAGGGCCGCTTCGCCCGTAACTCCTCCGACGACGCTGCTGCTGCTGCTGCAGCTCAAGTCGAGGTGTCGCCGGCGACGAATAATAATGTGCCGGAGTGGTGGCCGGCAGTGCAGGAGGCGCTGGCCAGGCAGGAGCAGGAGGCGGCTGGCCTCCATCTCTGCGACACCGCCGACGATGACCTGCTAGCCGCCTACCTCGGCGTCTCCTCCATCGATCTCTACTCACCCCGCGGCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036829