Os12g0188566

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0188566| Description = Similar to Thioredoxin (TRX)| Version = NM_001189898.1 GI:297728926 GeneID:9271928| Length = 7451 bp| Definition = ...")
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Gene Name

Os12g0188566

Description

Similar to Thioredoxin (TRX)

Version

NM_001189898.1 GI:297728926 GeneID:9271928

Length

7451 bp

Definition

Oryza sativa Japonica Group Os12g0188566, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4454569..4462019

Sequence Coding Region

4461245..4461574

Expression

GEO Profiles:Os12g0188566

Genome Context

<gbrowseImage1> name=NC_008405:4454569..4462019 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4454569..4462019 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttggtgagtcgtccgtgttcaccttgcagcacttgatcttgccgacgtactccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgcaccacggtgcccagaactccaccagcaccggcgcctcgctccccagcaccatgctgtcccagttcttctcgtccgccaccaccactgccacgaccccacacgcacacatacgatggttttcgttttgttttgcaccagaatatgacgaatggtcaaacatgtgttttaccttcgtcgacgacgttgctgcactggcaggcgaagcgggaggcaggtcggagcggtga</cdnaseq>

Protein Sequence

<aaseq>MFGESSVFTLQHLILPTYSLASSSITGAIILHGPHHGAQNSTST GASLPSTMLSQFFSSATTTATTPHAHIRWFSFCFAPEYDEWSNMCFTFVDDVAALAGE AGGRSER</aaseq>

Gene Sequence

<dnaseqindica>6677..7006#gagagcgctccacgccgcgcgccgtcgctgcctgcacagacgtccgtagatgccagcggggcggcccgccggatgtggagcaaggcggcgcaagcggccatggcggcggccacacatgctcgtcggccccgccgtcccctccaccacctcacataatttccgtccacacctttcgaggctgtgcattgggtcggcgacagtagcgagagctggcggccatggatgagatgagagtgggacgagcagccgtggccgcggctgcggagtcgcttttggaggctacgtcggcgagccgtgctctcgactctgtcaaagacccccgcatctccccgaggttcatcttctccacactcctagcactagtacttccgtcagaactcggaattacaaaattcaggcttcaattcaatccttcctcacttgggaatgagaagaagtactcctagcactagttatgtagtaggaattcagaaatcttggagtaacttgatcttggaatacccctagcactagttcattcagaatttagaaatcctagcactacctactactccttcaacccggattcagaactcagattgcgttgtactccaaggatttagagtgaattaacatgtgattgctttaggcggtatgatgcgttagatggtaaggcagagagttgattaggctacattgttaccaatttgaattctttttttgatggttattcaggaaaacaagtcgtaagcatttcatttatgacatgttcatactcctgaatttcagagtatgattgtagcatgaaacaagttcagagtattcttgttactcctgaatttcttttagagaacaatgcaggagtagaagttctttttttttattattcttgttagagaacaatgcgatacaatttgggcatttggttttgtccaattggtgtgttattctgaaatggccattaggttcagagtacttgggttttgtctgttattctgaacttgctgaagaactaatcctagagatggtggtctgtgtgaattttctgagaaatcggagtaagatgttttctcgagtagatatcagtataatccgatttacagcatgcatagatttttttttttgataacaggtaatttgattacccggcttttgggagaaagccaaacaaaacaaggtctgaatacaaaaaaaaacttaaaggaaaaacagagtaaaactggggctgccagtacccatcacgcgctagaaaactaaaccccaaaaggcttacaaaccccgccaagaagtatccaaacgactaggaaatctcaaacccctaagagcaacatcactggcttaagcactaatattgtccggtagcacattcacaggacgtagagactccagcttagccttcagcttctcaagcagcgcgttcaaagcttcgcgatctctttcttttgacagcagcaccttccatctctgcatcaaggaaattgccttgtacactacctacaaaggtgatctcactaatttattctcaaaaacaaagtcatttcttaccaaccacaaaccccagcacagactagcacaaagaaaaaggcctaaattcacccccaatttattatccttaacagctcttataccatcccaaaaattggttggaattaacccccccccccaattacctccattacagagcaccaagcaaagcaagcaataggacaagtaaaaagagcatggttagtagattcagttctcaggcataatttacaaaatttagtacccccttccaatttctctgaactaagagttcagcacaaggtattctccctctcccagccaaaaacaagaaatgcttgacttttaaaggaactttgcacccccaaatctctgttatctctttgtccacaacacccccaaactttaacaacctatacatagatttagtagtgaacttcttattcttctcatgaggccaaattaagctatcaggcaaatcatctagcctcacatcctgcagcaaacttttcaaaacgtctaattgagccttgtcagactggtccagatttcttctaaaggacaaatcccaattaggggcacccataacctccctaaccgaaagatgttgttgattattcaccatatataaggaaggaaacaaaattcttaggggaacatctcccaaccaaacatcctcccagaactgtgttttttctctattaccaatcttcttaactaccaaatagtttaaccagactttgcactcatgaaggcctttccaaaactgggaccccccactagcagaactcttgaaaaaactgcccctccctaagtacttattcctaagaacaacacagctcatgtcctgagagttgccttccaacttcatgatccatttactcaacaggcaaatattcatggtcctagtgtccaagaaacccaagccaccaaagtctttaggtctacacaagccttgccacttaataaggtgatatttcttcttctttccattcccctgtcaatagaatctcccccttacagtgtctaaatttttgtgaaactcctcaggaggctttaaaaaacccatagcatacattgggacactggacagacaggtattgatcctgatctccctccccccataggagagatgaccactgtgccaagattgcaatcttttctctattttttgcatgattggaagcaagtcccttttccctaccttaccaacccccataggcaaacccaagtaagtaaaaggaagagaacccactttacaattaagcatgtcatcatacgattcctcctcatcctttggaacccccaacacataaacctcactcttctgataattgattttcattccagacatctcttcgaaacagaacaacaagaatttcaaggctaacacattttccttagtagctttagtaaagagaatagtgtcatcagcatactggagatgagtaagaccccctggaaccagattaggaaccaacccctccaaaaccccattactgttagcaccatccagaataactgacaaagcatcccctattagattaaataagataggagacagaggatccccctgcctcagacccctaaaagtcttgaaaaaaggtccatgttccccattaatatttatactgactctaccccccttcagtgatcttcttaatccattcaataaaaatgctgttaaaattcttcttctgcatcacctcatagagaaaccaccactgcaccctatcataagccttttcaaaatctatcttaaagataacacctgattctttctttttatggagctcatgcaatacctcatagagaattacacacccatccaaaatataccttccaggaatgaacgcagtctgtgtccagttaataatccccccaatcacactagttatcctcatggttaaagctttagttagaattttcagaatcacattttgaagacaaatgggtctatattgctttattgtattagcatccttaatttttggcagtagagaaatcaccccataatttattctatcactgtctaaaattcctttctgaagatcatcaagcatctctttgatcaaacccctaaattcaggccaaagtttcttatagaaacccactggaaaaccatcaggtccaggggcagtatttgttttcatacttttcatgacctgatcaatttctgacaattcaaaaggtttcatcaagctttcattatccctctcattcaaacttaacctgttagcccaaaccccctgctccaaatgaatgtttctcagttcttccctcccaaacaactgtttgtaataatcataaatatgagtctgtatttgttggaaatctgaaataacctcctccccttgctgtatagagaaaatgtgacttttcctattcctaccattagcaatcctatggaaaaaagaggtattgctgtccccccttaacaaccattgttcaccccctctcctttgccaccacagttcttcttgtagatagatctgctctacttccttttccagctcatatctgacctcccattcttgaggaaacaaatccctctccttagcaatgttatcaatttcagtcagcttttgttctatctctttccttctctttttctgtttgctcaccatattagcactccacccccttaaccatctcctcagataaggcataaggagatgccagtaatccattattttgctctgtattctggcaggccacttctcaagcaattctttcttaaaaccctccagctcaaaccaacccatctcgaacctaaaattgtttcccctaactctctccccctccctagtgtctaacagcaaagggcaatggtctgagccaaccctcaaaagagaactaactatggccaaagggtataaatgatcccaactagaggtcaccaggattctatctagaacacatctgatgggattgatttgcttattcgtccaggtgaatttcccccctaacttaaacagttcttgcaactcataatgattaataaaattattgaaagcctcagttcttctcacatccaccccaccaccaccagatttctcatctagatatcgatacagattgaaatcaccccccagaatcataggataaactccttgctgtactttgttgccaatttcagctaggaactcccccctatgtgcctgttgagcaggaccataaacgttaattagctcccaattctgtccatccttcttatttttaatcaccattcttaaagaaaaggccccttgatcccaatcaacaatatcaaacaacaactctttaaccccagtcataataccaccagagtgacccacagctgccacatatctccaagtaaagttatctcccaccagattcctcaattccctatcagtaaaactttgcttgattgtctcctgaaggcaaattatatccactttttgttcaaaaaccatctccctcaactgtctttgtctacctgcagcccccaaacccctaacattccagaacaccactctcatgatttagacttctttctaggacgccccctctttttcggcccagaccccttttgcacagattgtttccctttctttttcttctgtcttagaccctcatggtcatgcaagtcaaaatcccccaggttatcaaaactctctttatctgcatcatccaactcatccctatcttcctccttcagaccctccatatactgatcattctccatttctatcacaggaacccccagaatcgcattattctcattggggtacagcatgcatagatatcagcattctcgtaagatgtttttgaaatttagatttccatactccctaattgtacatgtaaaatgtatttgaaaatacacactaataaaatgtctgcttggattagttctcatgttgctttcacagaaaactagagtatcaatggcttgagtttctgatatctgaatatttactgtaactgtctattgtctgctcaatatgtcttctgcagagtgcgtaagaaccatctttatctttaattcgatcaatttcatctcattcagagttcttgcttggaatgtgctattcttgggtcaattgcattcagtcacattaagttgagcacaagcacatgccatggaaaaaaaagaaagaaacttgaatggctcaagttgtcacagagtggaactccaataagtactccaagatagaatttcaggaatatcatcctcatgtggttttcaacccaagcacaaattgaaagaacattgaaaccttaagatattatcactgaattattgccaaattagacaaagagtacactattttgaaggtgctaacttcagatggagtacacactattttgtcaaacaagctttgttcttggcacaagcacaagcttctagtgctgttgaattgaagtgactggagcatcaatcggcttctactatggtagagttcctaagctgcttcaaaacttatcttaaaaacttgtatggacttcacttctgcctaggcacctgaactgccgcttgattcaatggatagctgttactgttagacaacacttgcatctaacatttgtatctgacatttgcattggtagtacacactctctctctctctctcctttttacgttggtatctgacatttccattttctgtcatattttcagctgttctgaagaatacaagtctgaagagctactttcaggtcagtgaaaccacactgacaaccattttagaaacagaattgaattgccctgattaccgcttgatgccttgaagcatatacaatcaaagttcaaacagatgtggccatcatatatgtatatgtagcacagtttgattcctctttgctagtcaaaagatggtatcatcaatcaataatagttacagtattgattccatggagtagtaggattacaacaattaaggacgatgaagagaaaggggtggctggcgatacacatagagaggcaaagcagggggtagcttagttacaacttacaaacgaagctctgatcgatcaagtctgatttgattgatgcagctgaagaagaagaggaagaagacgacgatgatgatgcaatcagctgctgacgtacttgtcgatgatggtggcgagggtggtcttggggacggcgccgatgacgctctccttcttctcgccgttcttgaacatgaggacggtggggatgctccggatgccgtagttggtggcgatgtttggtgagtcgtccgtgttcaccttgcagcacttgatcttgccgacgtactccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgcaccacggtgcccagaactccaccagcaccggcgcctcgctccccagcaccatgctgtcccagttcttctcgtccgccaccaccactgccacgaccccacacgcacacatacgatggttttcgttttgttttgcaccagaatatgacgaatggtcaaacatgtgttttaccttcgtcgacgacgttgctgcactggcaggcgaagcgggaggcaggtcggagcggtgacggcgaggcgacggacaaccttggcttggactggctgctgccggcgccggagaggaggagtctgtccctactgccgccggaggacggtggctgtggggcgtgcagagtcgcccaggctctgaagcacgtctccaacgccattattttctcactctaagctacgctcctcacacgcagtgacacagagagaagagaaagaggaggagaaaattttttgtgtagaagagaaagaggatagggtttgttctccctgtggcattggataatcgggagctttggcgttggtgtggcatcgtgaggtgctcaggggttgtgcttcctgcttgtggatgaggtggttttgcccccctaaacttttggcccggtgtcgcctgatcttttcgttgcctccttcgtgtgcctgactcgaggatatacgcgcctataaaaatgaatatcttggatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0188566, RefSeq:Os12g0188566