BGIOSGA036888

From RiceWiki
Revision as of 08:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036888| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036888, complete gene.| tag = OS12G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036888

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036888, complete gene.

LocusTag

OS12G0115900

Ensembl Transcript ID

BGIOSGA036888-TA

Ensembl Protein ID

BGIOSGA036888-PA

Length

2789

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:973553..976341

Sequence Coding Region

973553..973676,973766..973843,974765..974871,975298..975375,975771..975872
,976047..976125,976223..976341

Genome Context

<gbrowseImage1> name=IndicaChromosome12:973553..976341 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:973553..976341 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCTCCGCCACGGCCACCTCTCTCCCTCCGGCGCCACTGCACCACCCTCCTCCTTCGCCCAACTCCGCCGCCCTTCCTCCTGCCTCGCCGGACCACGACCTCTCCGCTCTCGTCTCACCCGGGTGTACGCGCTTTCCAGCAACGATATCAGGGTGGGCTCCAACCTCGAGGTCGACGGAGCTCCCTGGAAGGTTCTTGAATTTCTCCATGTCAAGCCTGGAAAAGGTGCTGCTTTTGTAAGGACAAAAATGCGTAATTATATCACTGGCAACACAGTTGACAAAACCTTTCGAGCTGGAAGTACGATCCCAGAGGCATCCATTTCAAAGGAAACTAAGCAATTTACCTACAAGGATGGAGCCCAGTTTGTGTTCATGGATCTGACTACCTTTGAAGAAAGTCGCTTAAATGAGTCAGATGTTGGCGACAGGCAGAAATGGTTGAAAGAAGGAATGGACTGCAATTTGTTATACTGGAATGGACGGATCATTGATTTTGATCTCCCCATCACCGTTAGGCTGACTGTAACTGATACTGACCCAGGGCAAGGTGACAGTGCACAAGGAGGAACAAAACCAGCAACCGTGGAAACAGGAGCTGTTGTCACAGTGCCCTCGTTTGTGAACGTAGGCGATGATATCCTGATTGATTCAAGAACTGGCCAGTATATGAACAGAGCATAG</cdnaseq>

Protein Sequence

<aaseq>MDLRHGHLSPSGATAPPSSFAQLRRPSSCLAGPRPLRSRLTRVYALSSNDIRVGSNLEVDGAPWKVLEFLHVKPGKGAAFVRTKMRNYITGNTVDKTFRAGSTIPEASISKETKQFTYKDGAQFVFMDLTTFEESRLNESDVGDRQKWLKEGMDCNLLYWNGRIIDFDLPITVRLTVTDTDPGQGDSAQGGTKPATVETGAVVTVPSFVNVGDDILIDSRTGQYMNRA</aaseq>

Gene Sequence

<dnaseqindica>1..124#214..291#1213..1319#1746..1823#2219..2320#2495..2573#2671..2789#ATGGATCTCCGCCACGGCCACCTCTCTCCCTCCGGCGCCACTGCACCACCCTCCTCCTTCGCCCAACTCCGCCGCCCTTCCTCCTGCCTCGCCGGACCACGACCTCTCCGCTCTCGTCTCACCCGTATCCTTCCTTCATCCTTTCTGCTCCCCCTCCCATTGTCCCAATGCTGACTGCCTGAATACTACTGCTTGTTCCTTTCTTTCTTGCAGGGGTGTACGCGCTTTCCAGCAACGATATCAGGGTGGGCTCCAACCTCGAGGTCGACGGAGCTCCCTGGAAGGTTCTTGGTTCGTAATCGTATCCACTCACAATCTCATCTTCTTTGGCTGTGTTTAGTTCGGCGCAAAGTTTAGATTTTGGTTGAAATTGGAGATGATGTGACTGAAAAGTTGTGTGTGTATGACAGGTTGATGTGATGGAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTTTCTTCCTTTCTGCTAGTACTAAACATACCTGATTCCTGGTTGGAGTCTCCCAGTGGATACAGTAGCTTTGTTGAACATACCTCATGTAGCCACAAATTTCATTATTTCAAGGCACATTATTATCTGCATATATAGGACCAGATGGGGGGGACGAAAGCTGCTACCTTCATTTCTTTAACACATTTTAGGAAGAATAACAACTCCCTTTTATACAACTGCAATCCATGTTGTTCATAAGCAATGTGACACTCTAGTGCTATAAAAAACAACTATTTTCTTGGTTGTTGCATCCACTGTTTCAGAAGAATTACCTCCTTTCATACCTTTCAGTGTGTACTTGAGCAAATTTGCTTCTGTTGGTTCGATTTTTCAAACTTCACATATAGCTTAGCTTGCCACAATATGTGAATGTTATTTGCTTTCCCAAGTATTCCCTGCTTTTCAGATCACTCACTGCTATGTTTCTTTCAGTTGCTAGAATGGAATGGTAAAGCATACTCTAGTACCTATAAAAGGAGCTTTAAGAGTTCCATTTGTTACGTTTGATTTAAATAAAATTATGTGTTTTTCAATAAATTCCAGACGAATCTATATCTGTGAAAAAACAAATGTTGAAATGTCATAGAGTATTCTGACAGATGTATATCATTTCTTGCCATCTATTGCTCATCTATTCCATTTTACTTTAGATGCTCGATATAAGAAATATCATATAAAACTTTCTGTCTTCATGCAACAACAGAATTTCTCCATGTCAAGCCTGGAAAAGGTGCTGCTTTTGTAAGGACAAAAATGCGTAATTATATCACTGGCAACACAGTTGACAAAACCTTTCGAGCTGGAAGTACGGTAATCCAAGCAGAAACTCACCTTTCTAAACCTGTAGAAATTACTCCCTCCGTTTCAGGTTATAAGACGTTTTGACTTTGGTCAAAGTTAAACTACTTTAAGTTTTACCAAGTTTGTAGAAAAAAGTAGTAAAATTTTCAACCCAAGACAAATTTATTATGAAAATATATTCAATTATTGATTTGATGAAACTAATTTAGTATTATCAATATTACTATATTTGTCTATAAATTTAGTCAAACTTAAAACAGTTTGACTTTGACCAAAATCAAAACGTCTTATAATCTGGAACGGAGGGAGTACCATTCTGTGACTGTATCAGATCATGCTTTAGCTTATGTAATAAAAAACAACTGATATGATACTCATCAACTCTCCTTCAATGTGTTCTAACAAAGAGCACTTATTTTGTCACTTTTGTTTTAGATCCCAGAGGCATCCATTTCAAAGGAAACTAAGCAATTTACCTACAAGGATGGAGCCCAGTTTGTGTTCATGGATCTGGTACATGTTTCAGTTTTTCATTCAAACATATCATGAAAAGAGTAGTCGCTAGCTGTCTGTATGCTTCAGTAATCAGTATGCAATGGAACACCCATGTTTGAAATTTAAGCACGTGCTAACCATATGGAATATGGTACTATAGAAACATATGAATTGAACTCGCTGATTTCTACAATGTAGAAACTACTGGTAGAAGTATCGTTTAAAGTTTTACGGACAGTCGGAAGTTTTACAGACAGACAGTCAAGTTTTAGAAACATATGAATTAAACTTGCCGATTCCTTTTGTTTGCAGCAAACTGCTGCCAACAAAGAAGGCAAAGAGAATGAATGGTTCTTTTATGGTGTGTTCCCCAAGTGCATAATGTTACTTATCTTTATAATTTTCCTTTCTAGACTACCTTTGAAGAAAGTCGCTTAAATGAGTCAGATGTTGGCGACAGGCAGAAATGGTTGAAAGAAGGAATGGACTGCAATTTGTTATACTGGAATGGACGGGTATTTCCTGTTTTGTTTTTACATAATCTGCTGTCCAAATCCAATCAATTAATTGGCTGTTGTCAGTTCATATGTTCCTATTTTGTTTCAAACTCTTGATAATGTGCTGTTTGATTAGTTATGTATTCTTGCACAGAATAGGATATTGGTCACTGACATTAATATGTCCTGCAGATCATTGATTTTGATCTCCCCATCACCGTTAGGCTGACTGTAACTGATACTGACCCAGGGCAAGGTGACAGTGCACAAGGTATAACTGCATGTGAATATCACAATTAGAAAAAAAATGTTTTCTTATTAAAGCTGACACGATCAGAATAATAATCTTTTAACTGTATATTTTGTAGGAGGAACAAAACCAGCAACCGTGGAAACAGGAGCTGTTGTCACAGTGCCCTCGTTTGTGAACGTAGGCGATGATATCCTGATTGATTCAAGAACTGGCCAGTATATGAACAGAGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036888