Os09g0372400

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0372400| Description = Conserved hypothetical protein| Version = NM_001069560.1 GI:115478862 GeneID:4346897| Length = 5834 bp| Definition ...")
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Gene Name

Os09g0372400

Description

Conserved hypothetical protein

Version

NM_001069560.1 GI:115478862 GeneID:4346897

Length

5834 bp

Definition

Oryza sativa Japonica Group Os09g0372400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13012138..13017971

Sequence Coding Region

13014802..13014877,13015013..13015054,13015969..13016268,13016395..13016446,13016619..13016696
,13017595..13017691

Expression

GEO Profiles:Os09g0372400

Genome Context

<gbrowseImage1> name=NC_008402:13012138..13017971 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13012138..13017971 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactgaggggaccaaacgtatctttgatgagttgacagaagctgccatgaagctaatggagaacggagagtataatgtttattcagatgatcgggagacttttgaacgtgaggctgcgggttatgaacgtctggcacgtgctcgtcttggtctgccagaagctgaagaagatatgtttgcagacagtccaaaagataaaaccactgcctcgttactggatatggagcctggtccttcagctgcccatacctctacaaccaccaccacatctaaggaagatgacagtgactttgacatgtttggtgacgatgatgacaagaccgatgtcaaacgtgattctgatgcaaatgctgtaggttcaggttcgaatcctgaacaagtatctcacgatgctaatgaaacctcaggtgcagagaaaggtgagaatggaagtgtgagctcagattatgtttatgatccaacttcaggttattactatagcagtagcacgggctattactatgattctacatctggatgttattgctctgcatctacaggagcctggtactcgtatgacgaacaaactggcgaatacaaagagatacagtctgaacaagccagcacggtcaatgaaacaccgggagatggcatcaaagagtag</cdnaseq>

Protein Sequence

<aaseq>MTEGTKRIFDELTEAAMKLMENGEYNVYSDDRETFEREAAGYER LARARLGLPEAEEDMFADSPKDKTTASLLDMEPGPSAAHTSTTTTTSKEDDSDFDMFG DDDDKTDVKRDSDANAVGSGSNPEQVSHDANETSGAEKGENGSVSSDYVYDPTSGYYY SSSTGYYYDSTSGCYCSASTGAWYSYDEQTGEYKEIQSEQASTVNETPGDGIKE</aaseq>

Gene Sequence

<dnaseqindica>2665..2740#2876..2917#3832..4131#4258..4309#4482..4559#5458..5554#acgcacggtgcacggcccacaatctgacaagcacccacccaccgatctgccccctcgctgctgacgtcatctccgccgccacccccgctcgccgccgacccatggagccaccgccgcggggaaccaagcgcccgctcccggccgacgccgacgccgacgccgacgccgccggcggagacgacgacgacggcgctcttcccgggtaacccccccacagtccagcccctcttcccctcccgcttactcccccccttcgtctaggagattctccctccggctagggtttcggcgttattgcctcccccctgcgtgtggttcttatggagttcgggtgtgacgttggcagggagcgcaagccgcggttccccaaggggaagaaggccaagtaccgggaccccgccgcagccgccgcggcggagggcatcgacggcttgataaaccccgagctcgcggcggagcggcgcgcgaggcgacgccaccgcaaggacgaggatgaccagcagggagtcgcctccgacgtcaggggattcgaagtgcgatacgaggtaggccgtgctttctatggactgaagtcgctaagcttgttctgcttcgtggattggatatagttagctggctatgcagatgattttagtgttggaattgcacgtatttttggagtaaatttttgtaacctggcattttgtggaaatattcagtagactgaacaagtttagtatcctaagagcatgcgggattacacttaaaccaaagaggctgcagggatacttcagtggaaatgcattaagattaagatgggaacttttgttatggatgtctgagtcctggttaatgttgctgcaacttttttatcctacttgaatgagtactgtgaactaaggaaccattttatagtgcatatgttttcccccttcatattctgagttagaaaacactattctctgcttcattctttttcttgatatcatatgaatgttgagccatgactttgatgctatccacctggctatcattgttggataacactgatttgatgttcaacaggatagtgcaaatttggttgatgatggcattcgactagagccttttaacttggaacaagagagggaggaaggatattttgacgaaaacggaaactttgtggagtacgcaaggggcaacgacatcaaggtgctgctgtttttatgttttaaattttacaaattgcaatcatgtaattttaattatagttgagtgatgcaagcacttattttctgtaggatgcctggttggatagtgttgaagttgacacaaagtatgctgaaaaggttcaaaagaagagagagaaagagaaagaagaggagttccaggatctttcatccgatgatattggaaagataaaaagaagaatatcaaacatacttgagccaggcgaaacggtatgtttgagtgtctattgtttttatgtatatgtgaagttatcaccctatctaatatttgcctctttgtaaccaaataaatgcctttagctaagaagtaagaaatgttaaagcaactatgctgtgcttaggcatcaaatgatattgtaaaagcacctaattcttttgaatgagttgaacactgaccctaaatccctaatcctgttatgctatcaaattctctcttttatttgatgttggatatagatcaatctgtgctgtccgtattgtggtaagtttggggttattgttctatgccaccgaatctattagtcatgggaattctagtaagaattttcttttaagtctccagaaaaggtgctttgaatcaattgttgtaccaattatggggaaaatgatattgctcttaaaaaggcaccagatttccaaatggagccttatatgactgtccaaatttagtgatttttaactgtagttatccattatcttaaagagttaaacctgatagcctgatatagtggttgcatataaatctttgctgctgatgctatgctcgaactattcaacccaacttgcaccaaggacaatgttgtttgttgcatcatgctatcatgtcagcttaatactgagcgaagttacatgcacatcctttgcttcctgcatatttctccctgttgtgtaaaaaagagcatatctatgccaaacgaattccccgtaaattgtgactttcattgcttagcaatctctaggaacatatgtttttgctattctgattctagagtgtaggcttactagtattcttgaaaaacttgagaaagtgtcagttattaatgcataataatggtgtgttgcttctccacatgatatttacttggctttgtgatacctattattaatgggacattcttttgctggtcgtaacattatgtgctcctcacatcattgttgcatcttgagttcttgacttcccaaggtctaaggatcgtaacataccctaataaagcagaaacactgaatgaaccaaaaaattgtcgcgagacaaaagaaacatgttctttttactgggaacagtagaggacaccttatggttagatttttatgtaaaacaagaattttatgtaaaagaatcatgtagagtcttttgtatcaataacttctgtgcctactaatactttcgacaattccctgccagataatacaagctttgaaaagattgaagaatacatccagtgataagcgtggcaagatgactgaggggaccaaacgtatctttgatgagttgacagaagctgccatgaagctaatggagaacggagagtatagtatgtgcttcttttatgcttgattctcattctgtttagctcttagccttctgttagtcatttcagtgtgcaattacgttgtgtagccttatagtgatttgcatcatctttacatctttatatgtttcaatgtagatgtttattcagatgatcgggagacttttgaacgtgaggctggttagtgtccaatcactagctaatttgatttctgttttgcggttgttatgttccctttctaatgtttctacttttgttactttccatttcttaaatttgactccctctgtcccaaaatatagctacttgttcaggtgcatagccagaagtagctatattttgggatggaggtagtactcatgagttttttttttttacttctctccatgtgtatgaaaattgtgtcactctcatcatgtttgtgtaaaagagatatttttttgcctatgtggttactttggtatttgaatttcccaaaaatattgagcttgttttcttgtaaaatgcacatgcaaaatgtgggtgcttgacagcagctttcagttctttgacattattagaaaaaagcatgtcgagtccataggtgttttgcttgctgcgttgatgagatgctctgattctctttcttctagtagaagcagattctctgcattgctgcagttaatacatgcatacattgacctagttgaaaaggaacatgaagtacaatccgacagcccctgggctgttcacacgtcattggggcattgatttccttttgaataaaagcttcatgttatcatgttcatgtatactggtggtagatataaatctattagttaacttcactgggcagttaaacatataagaacaccatgtttcaccagttaaagatgcatccactacagaaattgatagaaagtgccaaaaaaaagagagcagcatctagagattgtggaactgaaaacagtgcagttacttgtgtaccagttctatcagtagtgtcttgtggctgtatgtacattgtattttaagtgattatgcaaattattctagaaatgtatcttaacagggattgcaccttcttatgtgcttcaattttcatgcttttgcagcgggttatgaacgtctggcacgtgctcgtcttggtctgccagaagctgaagaagatatgtttgcagacagtccaaaagataaaaccactgcctcgttactggatatggagcctggtccttcagctgcccatacctctacaaccaccaccacatctaaggaagatgacagtgactttgacatgtttggtgacgatgatgacaagaccgatgtcaaacgtgattctgatgcaaatgctgtaggttcaggttcgaatcctgaacaagtatctcacgatgctaatgaaacctcaggtgcagagagtaagttgtgatatgctgctgatttctatttgtgcttgctaagcaacacgaacgtgacacatttcctttgtaacttttaacaactgttgtttctgttttgattagtcttttttttgttccttgcagaaggtgagaatggaagtgtgagctcagattatgtttatgatccaacttcagggtaggttacaggttttaatttatgctaccatactcaactgttacagccgatttgagtatctcagttctggttttctttactatcagcattacgacaaaattatgcagccaatgctgtaatttttgaatagttaggttatgttagttacatttgctttcccgtttttatgcagttattactatagcagtagcacgggctattactatgattctacatctggatgttattgctctgcatctacaggagcctggtattattctccatctttcatttacatgcaatggcattggttagtttttgcgtgggctgtttccttctggatgcaataacactatctgtatgctggacagttccccttttaagtacttacgtcgaggccccatttttatcacaattgtgtatttgggtgccatgaacccaattcatgacagggtttaacatctgccaaaggatggattgttggtgaccaacttgaagtagaatgttggtagccaatgaacgacttgaagtagtccattgcctattttcgtgtggaatgatttcaagttgacatttaagcctcctattcagcttacagcttagttgagatacatgggacaatattctttaactcaacttctaaatccttatgaaaatttctggagaaatgatatccatgcaatttagagtatagcataatatattgtttcccattttacccatatctgtgttctgcatgtgttcacgtcattttgaaaaatggaataccatatggttgattttagcactgaccgttgcttgtgaagcatctatgattcattacctatgttactatgcccactaacatcctgatatccatgtgccagttattacatattttagcttcattctttagacatgggtatgtgccacatggccattcaattaatattccttcaaacaaactttgatggcgagagctcatcttactagttgagtgtgtgggtgcattcagagcgaaaatacattttccccatgcacttggtatacaataaagctgcatattattaaataacttcaattgtagcaatatgaattcctaattaccaaatccttattacagttctctacaactaccaacactaacttatagaactgcatgtgcttattttatctaccatgtatttcaggtactcgtatgacgaacaaactggcgaatacaaagagatacagtctgaacaagccagcacggtcaatgaaacaccgggagatggcatcaaagagtagcccgagtacttgtaattggctctctcaagttagcttgtttattacacagtgggatgtagcttcagtttttcggtagaggggcattcgaatctcacttttgtttgtacaagtacggggagaatgaaaggctgtcttactaccataggattttatttagatatagagcagaatgatccgctgagtgcaacccttacgcccacttctttattttgcattgccccatggtccatttccctgtacaaatctgtgacatgtaatattccctgccatgttcagcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0372400, RefSeq:Os09g0372400