Os12g0188900

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0188900| Description = Conserved hypothetical protein| Version = NM_001189899.1 GI:297728928 GeneID:9269093| Length = 5472 bp| Definition ...")
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Gene Name

Os12g0188900

Description

Conserved hypothetical protein

Version

NM_001189899.1 GI:297728928 GeneID:9269093

Length

5472 bp

Definition

Oryza sativa Japonica Group Os12g0188900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4468978..4474449

Sequence Coding Region

4469050..4469121,4469952..4470008,4470093..4470158,4470849..4470982,4471114..4471303

Expression

GEO Profiles:Os12g0188900

Genome Context

<gbrowseImage1> name=NC_008405:4468978..4474449 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4468978..4474449 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccctccggctccggcgaagccgcccccgcctcctccacgtactacgacgtctacggacccgacgctaaacctgatgttgtttttaaggaggccacttcaaattctacgttaaatttgcaggatgttcaggggctagtaacttgggtcattggtgatggcatgctgccttcttgggtgtttgttaaaaacaagcctcttataccaaaagtcgtccttctatatgttcctggccttgatgcagctttatatatgtcgcaatcccgtcacctttcttctttgaaagaattttgtggcaatccaaaacctgttctagcttcaagctgtataccagatgaaaggcataccatcgatgcactcctaacatgcagagtaaagcgaaagcgtgcgttgaaaacaacggaccaatctcatgaatctgatggccaaggtacaagattgctgagggttatgtttcttttatttttaagaaaaaatgttgaattattcttcttatttgagttcttgctatga</cdnaseq>

Protein Sequence

<aaseq>MAAPSGSGEAAPASSTYYDVYGPDAKPDVVFKEATSNSTLNLQD VQGLVTWVIGDGMLPSWVFVKNKPLIPKVVLLYVPGLDAALYMSQSRHLSSLKEFCGN PKPVLASSCIPDERHTIDALLTCRVKRKRALKTTDQSHESDGQGTRLLRVMFLLFLRK NVELFFLFEFLL</aaseq>

Gene Sequence

<dnaseqindica>73..144#975..1031#1116..1181#1872..2005#2137..2326#caaatccgaggtcttccctgcataatcctccctcctccgcggcaaagccctagaagcgccgccgacgcccacatggcggcgccctccggctccggcgaagccgcccccgcctcctccacgtactacgacgtctacggacccgacgtatgttctctctcccaatctttctgttcttcttttaatcgtttccccttttgatttcgggatttcggggtcttaagagtgataaaaacaggggggaggaattggcaatcgattatttgttggtaaatgttgcggttttattattttcgggtggtttttgctggtgggaacatatcgcattttgtgatttccgtggcgtcggaagtgggaagcaactgtgctcttctatgttgttaacgcgttattatgattagatttttttttcttgtaaagctaaattcttgctaggattaaaacggagggcatccctgtttgtgtaatgatggtctctgcgattcttattgttaatggcaaaatctgagtgttactactgatagcgctgcgcttttgctggatactttgttcagaggggtgaagcgcggatatactactgtaacatacaaagatcctagttttgaagaacacactctcatggaagcatacatgcagttcattccttgattcattttattttaacagaggaagcattcgctactaaacaagtgacccgtcctgatttttgcactccaaattcctaatgtgaatatccctgctaaagataagacagaccagatcaatagaataatatactgctgctgtccttgttcatatcatcatttgtgcaaaatcaaaatactcccaaagtatcggtggactattaagtgaagcagcaaccaatttatctagatagatagttggctatttgttctgctgaatttactgatctatatttcctccttggctctaatgaaccaaaattctcataccaccgattctttcatcatgtccaggctaaacctgatgttgtttttaaggaggccacttcaaattctacgttaaatttgcaggttcttttcatcactgagcttatgaaattgaggtctgagaacttcccttgtaatgtgacattttgtttgttctttttagtgcaggatgttcaggggctagtaacttgggtcattggtgatggcatgctgccttcttgggtgtttgttaaagtacatattctcttccctatttcctcctaagtttcaatgtttagcacgtggtttacttttccttatctttgtccttctcaatgaaaattgttagtcttttttggggtccatatcttactgcatacttcctctgattctaaatataagtcattttagacttgtgaacaacaattaagaaaatagtttaaataactttttttgccctttatttattcatattggaaatatgattcattcatttgtgtgagaatttagttgccaaggataaaaagaaagaaaatatgaaaaagtgcccagaaattccaatatgatttatatgtatgaaagagttaaaaggctagagtattgccgaatatgttgttcttaaccactcagtttgatgttagaacatgcatagtatacctgacagcaagtgctttttcctgcaactgaaagaaaggtctgtactttgtttctaattttatggggtgtggcaattaactctgtctgctctacaacctggactacccaccatgaattttaaaacttgtaaaatactttatgtatttcatatctagagagatgttgattcacagtgagcactgatttttgtttgacgcatgtttgtcttatgttccaattttagattatttaattaatgcttcaagaaagatccccttatcactaaatttgttattcttttctgcgcagaacaagcctcttataccaaaagtcgtccttctatatgttcctggccttgatgcagctttatatatgtcgcaatcccgtcacctttcttctttgaaagaattttgtggcaatccaaaacctgttctagcttcaaggttggtgcactaaactggggagatggatgtttttgcccagaaccttgtggattattttgtgtgggcaatttaatgcctccttcgtataaatacactgtaccatgtattgctaatgatagcttttcttgcagctgtataccagatgaaaggcataccatcgatgcactcctaacatgcagagtaaagcgaaagcgtgcgttgaaaacaacggaccaatctcatgaatctgatggccaaggtacaagattgctgagggttatgtttcttttatttttaagaaaaaatgttgaattattcttcttatttgagttcttgctatgaagttgtttatattatgatgatagaatcactgaaaggacatatgattaccatttctacttttgggagatcatgttaattatcaccattctgccttgtgccatttatttgcaaagagatttttattcttgaatttacagcagacattatttttcattcttatcatttttttccttgtacctactacctagttgttctttctcagccttatttctgtaaaaattaactgttacatagcatctgcattgagatgcaatgatcataacagaagcaccagctcactgtattgccatacagcttttatgctggcctataagtgcacctacagtctctagatttacttaatcaatcttttccatgagaaaatggtacttatgtttttatacctaagatattgtattatgtgcaattttttaactgttttacatattccagaaaagttatcaagtttggacgatctaaaggatataccgtttcctattaaatattacacgctttctgaaaaagacttggaggacaatggatacaacttcagtttagaaggttatccttttgtttttctcctctcccgcttgccctttcatgctctcagctgaactcatatattattgccacataggttttgtccctactgtttcagctcctccaggctcttcgccatatgcaattcttgcacttgactgtgagatggtaatgtgatgttctgtacaatatgaggcccccttttgtgttttctgaaaataccaagtacactgactttcaactactatatgttaccaacagttttgcactgtgacatcacttgtacattatttgtgtctgagtttccttaagatctatgttttgaaagtttgcgaccttttcagtgtgttactgcagctggatttgaacttacaagagtaacattagttgatattaaaggagaggtacctactttgcgctcaatcctttattgtctcactattctccctgctgagtattgattttgttataatctatttcaggtggtgctagataaactagttaagcctgccaatccaatcactgattacaatacaaggtacatgccatgatgcctctaatctcctttgatgtagggctgttacacatctatgcttattctttcctttacatagataatagggtttggtgcctttctttcaatcatatgtttgatattcctttaggaagataaattggatctgatacctatctttgaatcatgtgtattgtattatggatatgaatgaagtgctcacgcatcatatgaatttcattgtcctaatttggccctttatgttcttcccttgtgatattctaaatgatatctccagtgggctctaacctctaaatgattaatcggaatatccaacagaagatgtaattattcttgaattgtgcaggttcagtggaatcactgctgaaatgttagctgatgttaccacaaccctccaggagattcaggtaattgttgtgtttttgtggccttgaatcttaattggtcttgatactgtgccaactctttataccattgtatatttgttttcaggaggagtttgttggacttgtgcacaaagaaactgttcttgttggacattctttggaaaatgatcttatggcattgcggatatcccacgatttgatcattgatactgcagttttgtacaaacataatcgtggccatcgctttaagatcgctttacgtgtcctggcaaaaaagtttcttaaccgggagatccagaacactgggtctgggcatgacagtgtggaggatgctaaagctgctctagaactcgctttattgaaaatcaaatatggtaaatatgcactttttaatgacttcaactgtcatctcagtaatatcttttagttatttttctgttaaaatgtaaatttggataactggttcaccaggtcctgattttggctccccaccatcaacttcacgacgaaagttggcttccatactgcatgaaagtggtaaaaaatgctccctcattgatgacgcctccgttcttgagcggtattcagatgcttcttgtaattcaatagcagttttctcagatgatgatgcactatctagatcaatgaaagaggttagtactacacattttaagtggcccttgtctcttccctgagagcttgaaggctttcattagtatgcttcttgaaatcttactgcaggtaaaaaatgacaaagttagttttgtctggactcaattctcgaaattgatctcgtatcttcgtacaagggcccaagatcccgataaggtgaaatcgtgtgttgcagaggctattgcattgcagacctgcgacagaaaaactgctcagaaaagaaaaaagcatcaaacttgtcctgaactaaaggaaattctgattgggttggacaagaaaattagaaaattatacagcatcttacctgataatgcaatgcttattatatgtagtggtcatggtgatacacctttggtgcaaaggtaaagttacctggagccatacaattatattcctcctcctagtttgtccatacagttcacgttctaaaatcgttgtgccaacttttcctaactgtacttcatgcagattacggaaaatgcttaagcaagaagaagaaacagtagaaagccgcgaaagcattgttaaagcattggaagatatacaagcccaggcagaagttgctctatgcttctgttgtgtcaaacattagctgtaagaagccttcttaccaatctcttttccctcatgctttgcaggctgaataattaaggctgaatttctttgttggcaggcattattcagacgatatacttgcggactctgtttattgtaggaaggatggagccccatgcatcccaactaacattagaacttctggctaacatgaacttctggattcaattttgaaagctgacttgccagttttaggaggcttcacatatgctcatgctgctcttttgctaggctatgatgggtggcatgtttctatcatatcaatgcatcatttgtaacaagatgtatcagtagcaaagctaccagggatatattagcagatgaaaaaagatattctttttctctcaaatgtatggtgatgaaaacagctttggtaacaaaagaagctcctagaattgttctgaaaagacagatttgac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0188900, RefSeq:Os12g0188900