BGIOSGA036933

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Revision as of 08:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036933| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036933, complete gene.| tag = OsI_373...")
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Gene Name

BGIOSGA036933

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036933, complete gene.

LocusTag

OsI_37346

Ensembl Transcript ID

BGIOSGA036933-TA

Ensembl Protein ID

BGIOSGA036933-PA

Length

7129

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1708725..1715853

Sequence Coding Region

1708725..1708892,1708995..1709049,1710555..1710745,1711670..1711739,1711815..1711960
,1712400..1712550,1713015..1713133,1713269..1713340,1714334..1714437
,1714732..1714788,1714881..1715073,1715289..1715432,1715494..1715580
,1715755..1715853

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1708725..1715853 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1708725..1715853 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGTCCAGGCAGGCCATTGTCGTCGTCGTCGTCTTCCTCGTTCTGTTCTTCGTCGGCGGTGGCAGCAGCAGATGCGAAGCCGAGACGTTGGAGACGGCGTCTCTCCATGTGGATTACTCTGTCGCTCGAAGAATGCCGGACACTTTGTTCGGCCTCTTCTTCGAGGAGATTAACCACGCTGGAAGTGGTGGCCTTTGGGCTGAACTCGTCAGTAACAGAGGTTTTGAAGCTGGAGCCAACACATCAAACATTGACCCATGGTCCATCATTGGAGATGAATCCTCTGTTCACGTGACAACTGATCGCTCATCCTGTTTCAGTCAAAATCCTGTTGCTGTAAGGATAGAGGTTGTCTGTGACGATTGTCCAGCCGGTGGTGTTGGAATTTACAATCCAGGATTTTGGGGCATGGGCCATGGTTTTCGCAAGGAACTCATGTACATGTTTTTGGACTTAAAACCACGGTTTCTACGGTTTCCTGGGGGTTGCTTTGTCGAAGGCAATTGGTTAAAAAATGCATTCAGGTGGAAGGAAACTATTGGTCCATGGGAAGAGAGACCTGGACACTATGGAGATGTCTGGCACTACTGGACGGATGATGGCCTTGGGTATTATGAGTTACTCGAGGATGCAACTGACAGTCTTGAGTTTGCAAAGGGGAGTGACAAATCAACATGGGGCTCTGTTAGAGCCACGATGGGGCACCCTGAACCATTCCCACTGAAGTATGTTGCACTAGGGAATGAAGATTGTGCTCCATTCAAGCTGATATACCGAGAAAATTATCCCAAGTTCTACAACGCCATAAAAGAGGCTTATCCTGACATCCAAATAATTTCAAACTGTGATGGCTCATCTGGGCCACTTGATCATCCTGCCGATCTCTATGACTACCATATATATGAAAATGCATCCACTGTGTTTCTCAAGAAGAATGAATTTGATAGGACATCACGTAATGGTCCAAAGGTATTTGTAAGTGAGTATGCTGTTAATGGTGAGGATGCTGGCAATGGAAGCCTTCTTGCATCATTGGCAGAAGCTGCTTTCCTAATTGGTTTAGAGAAAAATAGTGATGTCGTTCAGATGGCATGTTATGCACCACTCTTCGTGAATGACAACGATCGCGTCTGGAACCCAGATGCGATTGTCTTCAACTCCTGGCAACAGTATGGAACTCCTAGTTATTGGATGCAGACATATTTCCGTGAATCAAGCGGTGCTATGATTCATCCAATTATGATCAGTTCCAGCTACTCTGATTTATTGGCTGCCTCTGCAATCACCTGGCAAGACGCTGAGAATACCTTTCTGAGAGTGAAGATAGTAAACTTCGGGCCAAATGCTGTGAACCTCACAATATCTTCAAGTGGACTTCAAGCTGGTGTAGATACGGCAAAATCAACTGTGACTGTTCTCACATCCAGCAACTTGCTGGATGAAAATTCATTTAGTGAACCAAACAAGAATTTAGAAGAGGGTAACTTCTCCATTACAAAAATCTGGTCTGTTACAATTAGACATGCAGGTGGTATGCCTCGCATTTGTCAAGTAGTCGTGCCAGTTGCCAGCGAGTTGCCGAATGCAGCAGAACAGATGCAAGTCTTACATCTTCCTTACTCAATTTGTTCGTTTGATCTTGCTCTGGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MLSRQAIVVVVVFLVLFFVGGGSSRCEAETLETASLHVDYSVARRMPDTLFGLFFEEINHAGSGGLWAELVSNRGFEAGANTSNIDPWSIIGDESSVHVTTDRSSCFSQNPVAVRIEVVCDDCPAGGVGIYNPGFWGMGHGFRKELMYMFLDLKPRFLRFPGGCFVEGNWLKNAFRWKETIGPWEERPGHYGDVWHYWTDDGLGYYELLEDATDSLEFAKGSDKSTWGSVRATMGHPEPFPLKYVALGNEDCAPFKLIYRENYPKFYNAIKEAYPDIQIISNCDGSSGPLDHPADLYDYHIYENASTVFLKKNEFDRTSRNGPKVFVSEYAVNGEDAGNGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFVNDNDRVWNPDAIVFNSWQQYGTPSYWMQTYFRESSGAMIHPIMISSSYSDLLAASAITWQDAENTFLRVKIVNFGPNAVNLTISSSGLQAGVDTAKSTVTVLTSSNLLDENSFSEPNKNLEEGNFSITKIWSVTIRHAGGMPRICQVVVPVASELPNAAEQMQVLHLPYSICSFDLALV</aaseq>

Gene Sequence

<dnaseqindica>1..168#271..325#1831..2021#2946..3015#3091..3236#3676..3826#4291..4409#4545..4616#5610..5713#6008..6064#6157..6349#6565..6708#6770..6856#7031..7129#ATGCTGTCCAGGCAGGCCATTGTCGTCGTCGTCGTCTTCCTCGTTCTGTTCTTCGTCGGCGGTGGCAGCAGCAGATGCGAAGCCGAGACGTTGGAGACGGCGTCTCTCCATGTGGATTACTCTGTCGCTCGAAGAATGCCGGACACTTTGTTCGGCCTCTTCTTCGAGGTGAGACTAGCTACGTCTCTTTTCTTTCTTTTCCATTTCTTCTCCTGTGGATGCTTGCTTTTCTTTTCTTTATCAAAATCTGCATTATTATTATTTGTGCAGGAGATTAACCACGCTGGAAGTGGTGGCCTTTGGGCTGAACTCGTCAGTAACAGAGGTAACACCACATTATAGTACTACTCCCTCCTTTCCTAAATGTTTAACGGCGTTGATTTTTTTAAATATGTTTGACTGTCCGTCTTATTCAAAAACTTTTGTAAAATATGTAAAACTATACGTATACATAAAAGTATATTTAACAATAAATCAAATGATAGGAAAAGAATTAACAATTACTTAAATTTTTTGAATAAGACGAACGGTCAAACATTTTTAAAAAAGTCAACGGTGTCAAATATTTTGGGATGTAGGTAGTTTTTTATTTGGCTTCCGAGCTGAAATTGACCATTAAATTAAAGAAGAGAGCAGTGGAGTGGTATCAGCCGTTGGATGTCCATTCAACGGCTGATTGGTCTTCAACCTCCAGTTCATTGACACGATTTGTCTCTCTTTTTATCTTCTCTCTATTTTTTTTCTCTTTGAGAACTCTTCTCTGGTGAAGTTGAACATTAAATCAAGAGTTAATTTCACTTTGGACTATATTTTTTTTAAAAAATCATTTTGGATCACTCTTTGTTCCCAATTTTTTCACTTTGGACTAAGTAATTTTACCTTTTGTTGCATAATAGATACCCCAATCTACATCTTCAACACTTCAATGACTCTGAGCAAATCGTTAACGATATGCTGGCGAATTTCCATACCTATACGCATGCCATATCTTTGCCAAAGGAAACAATAGACATGGCTAGCAAATAGAGTTAGGGTGGTTCATTATGCAACAAAGGTGAAAGTACCTATTCAAAGTAAAGAGATTGGGTATATGGTGTTGCAAATTGAAATTTTGGCGATAAAACATGGCACTAAGTTTAATTCACTCTTAAATTAAAGAAGAGAGCAGTGGAGTGCTGTCAGCCGTTGGATGGCCATCCAATGGTTGATAGATCGTCTTCAACCTCCAGCTCATGGCTACTCTCTCCTCTTGAACGATTCCCTCCTGCCTCCTCCCTCCCCGCACCTGCACCTGCACCATCTCCGGCGTCTCTCGCGGCCGGATCCGCCGCCTCCTCACCCACCGCCCAAGGCCTCCCCTCCCTGTATACGAAGCCCCGATGAACTGCTCCTCCCTCCACAACCCCTCTATACCCCGCCAGATCCACTCCACGGCCCCACCCCAACCCAATATCCTAATCCATTCGCCCTCTCTCGCCGGGGAAGAAAGCCAAAAGGAGGAGGAGGAGGCTCATCGGCGCAGGGATGCTCGGGATTCACCGGCCAGCTCGACCTCGTTTTGGTGGGGGTGGTGTGTGTGAGAGTGAGTAACGAAGGCTTGAGGTTGAAGAAGCAACATGGATGGTTTGGATTTGTGATCTACTGCCAAGAATATTTGGGGAGAAATCAATCACCTCATGTATGGCAAATGCAAGGATTTTTGAGGAGAAATCAACCGGCTGATGTATAGCAATGTTGAATAAGAAAACATTTTCCCCCCTCAATAAATAAATAAATAATAATATTTGGAGTTTAACTTTAACTGATTTTTTGTCTAATTTCTTGCTTTAGGTTTTGAAGCTGGAGCCAACACATCAAACATTGACCCATGGTCCATCATTGGAGATGAATCCTCTGTTCACGTGACAACTGATCGCTCATCCTGTTTCAGTCAAAATCCTGTTGCTGTAAGGATAGAGGTTGTCTGTGACGATTGTCCAGCCGGTGGTGTTGGAATTTACAATCCAGGATTTTGGGGCATGGTATGAGTTCTATCCATTTTTATAAGTGCATTCCTATATGAATAATATGCAAAATAGAGCTTGTAATTGAAAAGTGTAATCTATAGCTTTTCTTCAAACCGTTTTCATTTTACCTTCTCATATTTTAATGGGATTTTACCTTCTGGTTTTGTGACGAATATGATCATTTCAATTTTCAGAATGTAGAAGAAGGAAAGGCATATAATCTGGTCATGCATATCAGATCATTAGAATCTGTGGAGTTGACAGCTTCACTCACATGCTCAAATGGATCGCAAAATCTTGCATCAAATTCTGTTCGGTATATATTTTTTCCGTAACACTGAGATAAAAAAGGTTTTTCAATCTCTCTCGCTCGTTCGCTCGCTAACCGAAAGGATTGTACATCAAATTTCTGCAGAGAAACTAATTTGTCAACTTGGACAAAGATAGAGCTACAGTTACTAGCTCAAGGGACATGCAGAACTTCAAGACTTGAACTAACAACTAGGAAAAGGGGAGTAATATGGCTTGATCAGGTGTCACTTATGCCTTCAGAAACATACAAGGTGCATTGTCTTTTACCTTTTTATTGCTACTGTCATCATAGCTTGATCTGGAATCCGGTATCATCTTGTGAAGAATGGAGAATAGAATTCATGCACTGACCCCAAAGATTTTAGCCACTACACCATGCCAGGTTCAATGGACACCCTGTTCAAATCATGTCTGCTATTTGATATTATTCAAAATTATTTAAAAAGGTCATAATAAAAATTATCAATTTATTCACATTGCTATCTGACAAGAAAAAAAAGTAAATTAACTTATCTGTAATCGGTAATCCCGTAGAGATGGCAGATCGAGTTATTGTTCCTTAATCTACATTTGCTTACTATGAGTCCATACGAGTTGTTGATCGACATTTTTCTTCTACATATGCAGGGCCATGGTTTTCGCAAGGAACTCATGTACATGTTTTTGGACTTAAAACCACGGTTTCTACGGTTTCCTGGTATTTCGAATGTTTTCCAACTGGCAATCAATTTCGGTTGCCCTGTAATTTAATCGCTCGCATTACATTTGGCAGGGGGTTGCTTTGTCGAAGGCAATTGGTTAAAAAATGCATTCAGGTGGAAGGAAACTATTGGTCCATGGGAAGAGAGACCTGGACACTATGGAGATGTCTGGCACTACTGGACGGATGATGGCCTTGGGTATTATGAGTTACTCGAGGTATGGGTTGATTAATGTGAAATGGGTTTTTTCTTTTGGTCTCGGCATATCTCACCATTTGTTTACTTCAAAATGTTCATGAAAGCTTGCTGAAGACTTGGGTGCTAACCCTGTATGGGTGCTCAACATTGGTAAATATCGTGTCTATTTGTCTTGTTCAATGTATTTTTAATCTTTGCACAAACCAACGAACTGCTCAGGGTTTTTTATCTTGTAATTAGGGATGAGTCACCATGATGCAGTTAATGGAACTATGCTCGCACCTTTTATAAAGGTATGTTTTCGATGCCCTACATTTTTTGAAGTATGGATGAGATGAAGATGGACTTCTCATGATGTAACAGAAAACAGTTGTAACATGTGAATATTAACATAAGGCCTTGCATTTATTGTGATCCCATGTTTCTTATTTCGAGATGCTTTGATTTTCTTGCTACAGGATGCAACTGACAGTCTTGAGTTTGCAAAGGGGAGTGACAAATCAACATGGGGCTCTGTTAGAGCCACGATGGGGCACCCTGAACCATTCCCACTGAAGTATGTTGCACTAGGGAATGAAGATTGTGCTCCATTCAAGCTGATATACCGAGGTAAATTTTGCATAATAAACAAATAGTATTGTCCTTCGTGTTAATGCTGCGATGATTGGCTAAATTCATCATTCTGTTTTTTATCGATCTGCAAGGGTAATAGCACTATTTTATTTAACTTCACCCTTTTTAGTACTATCTGATTGCATAATGGAGATATTTTGGAGAAATAATAGATGAAAAAATTGGCTGCATGCCTTGTGGCAGAGGCCAGGGATGTAAAATATTTCCATTATAAAAAAATAATAGATGAAAAGAAAAACAAGAAGTTAATTTACCAGTCTGCTGTTATGTTTCGAAACAGACTTTACCAGTTTCTAGAAGGTTCATTAGTTTTACATTTGATTGAGGCCAAATTGGCTATGACGTATAATGCTGTTTCAGTACATTTAAATGGGCTACTACTATCATAAATATCCTAATTTTCCCTTGATATCATATAACCATGTAATTCTGTTGAACAGAAAATTATCCCAAGTTCTACAACGCCATAAAAGAGGCTTATCCTGACATCCAAATAATTTCAAACTGTGATGGCTCATCTGGGCCACTTGATCATCCTGCCGATCTCTATGACTACCATGTAAACAACTCACTGAGACTAATTTATTTCTATCATTCTCCCTATTTTTAAATTCTGTCTTGCTGGTTTTTTTCAGACTTGGTTATGTGATCATTTTCTCCATAGATTTCTGAGAATGTTACATTTATTCTGTAGATATATGAAAATGCATCCACTGTGTTTCTCAAGAAGAATGAATTTGATAGGACATCACGTAATGGTCCAAAGGTAATGAATTTGATATAAAGTGGCTTCTTTTGGGAAATTAAGTTCTTTTTTTTTATTTTTTTTAGAGAAGGGTATTTTTTACCCGGCCTCTACATCCAACCGGATATATGCGGCCATTGAAATAGGGAACTTAGCCCCACAAACAACCCAATCTGAAATTCGCTCCATAGGAGATTTGAACTTAGGACCTTGGGTACTAGGAGATTCGCTCCATAGGAAATTAAGTTCTTAGATTAGATCAGTCTTACAAAGGCAGCTTCTCTCATGCGCCATTATCCTCGACATTTTCTTGAATGAAATATGCTTCTAGTTATTTCGAAAAAAAAGTGTTTCTAGGTATTAGTTTCTTCCATCTTCTTCCATGACTGAGACTGAATCTATAAGATCAGAATATATGATAACTTGAATAATATCCCAAACTAGAGCAATCTACTAGTACTTCATAACTTGAACTCCAGATCGCTTCTAGAGCAATCTGCTGTGGTATTGATTGACAACAAGCATAGTTAGTAATTATGACAACAGGCATGTTCTTCTTCTTCTCTTCCTTTTCCCATGAGAAGAAGCCTAACTATCGAATAGCAAAACGTAAGACGCTGTTCTTCCTTTTCCCATGTTTGTTGGATGGTTTGGAAGGAAAGAAATGCGCGTGTGTTTCAGAACCAGCGGCGCTCAGCCGGTTTCCTGTTTGGTTCAATCAAAGAGGAAGTGGCGATTTGGAAGGAAGCTGGGGTTTTCAGAAATATAGGAGAGTAGTCCCTTAGTGTAATCTTTTGCTTTTGGGAGGTTGCTCCGGTGACAACTTCCATTACTTCGACAGCTTCTTGTTGAAGTTATAACTTTGTATATTTGTATATATTCTTCAATCTTAAGTAAATTTGGTTGGCCTTTCTTGGCCGGCCCGGCAATTTATTCATCTCATTACCCTTTGATGTTGGATAGACAGAATATAAGTTAGCAGGAACCACTGACTATGCAATTGTTTCACTGCAGGTATTTGTAAGTGAGTATGCTGTTAATGGTGAGGATGCTGGCAATGGAAGCCTTCTTGCATCATTGGCAGAAGCTGCTTTCCTAATTGGTTTAGAGAAAAATAGGTGATCCCTCTGGGGATACTCTCTTAATTCTTTATCTTGGGTTCAGAGTAAATATAAAATCATGCGCAGAGTTGTCTACTTGTATCCAGACCATGCATGAATATAAGAGATCGTTCAATGGGATTCCTGGATAAATTGTTGATTTTTCTTTGACAACTACTACCTCATCTTTGTACTTCTCCACAAGGAAAATATTTTGAGTAAATGTATAATTTGTAAAAATTTACATTGAGCAACAGTAATTCCTTATTGCAAGTTATTGAATTGGCTCTCATCATGCATGCTTCTTTGCAGTGATGTCGTTCAGATGGCATGTTATGCACCACTCTTCGTGAATGACAACGATCGCGTGTTAGTATACATGGTCTTATACTTTCTTTGTTCAAGGATTCTAGCATCTGTTTCCTCTCTGACTATTGCTAATGTATAAATGTGATAACCAGCTGGAACCCAGATGCGATTGTCTTCAACTCCTGGCAACAGTATGGAACTCCTAGTTATTGGATGCAGACATATTTCCGTGAATCAAGCGGTGCTATGATTCATCCAATTATGATCAGTTCCAGCTACTCTGATTTATTGGCTGCCTCTGCAATCACCTGGCAAGACGCTGAGAATACCTTTCTGAGAGTGAAGGTAAACCATCCATTCCAGTTTCTTCTAAACTTATATGCATTTGGTTCAATTCATTAGACATGCGCCTTATTGTTTGGAATGATTTAGTTACAACGATACAAAATTGATTCAACCAATGCATACTTGCATAACATGCATCTGTCTTTATATGTATTACTGCTGGAGTAATATGTTTGGATCTTAGAACATCCTGATCTTCAAATGATCTTCCACAGATAGTAAACTTCGGGCCAAATGCTGTGAACCTCACAATATCTTCAAGTGGACTTCAAGCTGGTGTAGATACGGCAAAATCAACTGTGACTGTTCTCACATCCAGCAACTTGCTGGATGAAAATTCATTTAGTGAACCAAACAAGGTATGACCAATTTTGCTTTGATCAGTAATTATTGGTTTCAGACTTTCATTACTGTGCACAGAATTTAGAAGAGGGTAACTTCTCCATTACAAAAATCTGGTCTGTTACAATTAGACATGCAGGTGGTATGCCTCGCATTTGTCAAGTAGTGCGTGCTACATAAACACCTTTGTAGATATATCCCTACTCTGCCTTTTATTTTGTCATGTCTGGATTATTTCCTTGTCTTTCTAAAGAACACAGAGAATCTATTGTAACACACGATATCTCAGGGTACGCAAGTTGGTCTAACATACAAGTTTCTTGTGAACACGCATTGCAGGTCGTGCCAGTTGCCAGCGAGTTGCCGAATGCAGCAGAACAGATGCAAGTCTTACATCTTCCTTACTCAATTTGTTCGTTTGATCTTGCTCTGGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036933