BGIOSGA036992

From RiceWiki
Revision as of 08:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036992| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036992, complete gene.| tag = OsI_374...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036992

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036992, complete gene.

LocusTag

OsI_37468

Ensembl Transcript ID

BGIOSGA036992-TA

Ensembl Protein ID

BGIOSGA036992-PA

Length

4978

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2560286..2565263

Sequence Coding Region

2560286..2560422,2560531..2560713,2561443..2561553,2562500..2562619,2563034..2563249
,2563300..2563323,2563539..2563629,2563703..2563904,2565124..2565263

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2560286..2565263 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2560286..2565263 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCTTACAGGAACGCCTCAAAGACCCACGGCTTCAGGAGGAAATTCGGCGTATCCTTTCCAAGATTTCCGCCTATGAGGGGACGGAGATGATCTCGAGTCCGATACCCATCTTAGTTTACTCGACATCAGGCAAACCCACAGCTTTGGGAGGCCGCTGTCCGCTACCAGGAGCAAGTCGGTGGGAGAGTAAGATTTCCCCTTCTGTATCTCAAGGTGGACAACGAGTCCGGGAAGGTTGTGGACGTGGGAAAAGTACTGGGACGATAGGCACGGCGTGGGAGAACCTAGAGGTCGTTTCAAGTCATTCAAATGGTTGGTTTGCGGACAAACATAAAATGTTTACGGCTGAAGCTGAAACAGCATCCTCCACCAAATCGACTGCACAACTTCAGCAGCACTCGTATTCAGAGGAGGAAGATTTGACCATGTACAAATCCCATCAACAATTACAGGTCTCAGAGGAGAAAGATACAACCATAGAAGAAAACTCAGAGAAAAAGTGGCATGCACGTCTCATAGATGAATACATTCGTGGAATATTGGAAGGGAATGATAACTCAGATACGGAGATTGAGGACGATGAGAATGTTCTCTCTAAGAGTCCTGTGGAAGTTGACCCATGTGCTATTGGTCAATTTCAACATTTCAAGGAGATGAATTCTCTCCGTGAAGAATGTGTCACTCCAAACCCTAAGAATGTTGACAGCTCATCAAAAATATCATCGCAACAAGGACATGCCAAATTGGCAGCAGGTTCTTCTAGTGTTTATATCATGGCGTCAAGATTCATGCAAGAACTTTCTCAGAAAGGAATAGATGGACTTAGTGAAGCGTTCGTGGCATTCAGAAACTATTTTGCAGAAAAGGATGTTTTTGAGGAAATTGATTACAAATTCGGAGAAATATTGCATCACTGCTCTCGTACTGTGGGAATTAGGAAGATTTATCATCACTATAATTTCACAGTTGAGATGAAAAATGATAAGGACTGTTGGATCCCTAGGGTTTATTTTGCGGAAGTCAAGATGAAGTATGGTTTCAAGTATCGTTTCTGTGCTCCTCTCGAGGCGACTGATGATGGTCAATGTTATTCGTGCAAGAACCAAGGTATTGATAAACTCAAGCACCCATCTAGAGGAGGGTACTCAAAAGGTTATGATGGTGCTGTATGCAACCACCTTGGTGAGGATAGTTCTGATGAAGAGGACGAACTTATGTAA</cdnaseq>

Protein Sequence

<aaseq>MRLQERLKDPRLQEEIRRILSKISAYEGTEMISSPIPILVYSTSGKPTALGGRCPLPGASRWESKISPSVSQGGQRVREGCGRGKSTGTIGTAWENLEVVSSHSNGWFADKHKMFTAEAETASSTKSTAQLQQHSYSEEEDLTMYKSHQQLQVSEEKDTTIEENSEKKWHARLIDEYIRGILEGNDNSDTEIEDDENVLSKSPVEVDPCAIGQFQHFKEMNSLREECVTPNPKNVDSSSKISSQQGHAKLAAGSSSVYIMASRFMQELSQKGIDGLSEAFVAFRNYFAEKDVFEEIDYKFGEILHHCSRTVGIRKIYHHYNFTVEMKNDKDCWIPRVYFAEVKMKYGFKYRFCAPLEATDDGQCYSCKNQGIDKLKHPSRGGYSKGYDGAVCNHLGEDSSDEEDELM</aaseq>

Gene Sequence

<dnaseqindica>1..137#246..428#1158..1268#2215..2334#2749..2964#3015..3038#3254..3344#3418..3619#4839..4978#ATGCGCTTACAGGAACGCCTCAAAGACCCACGGCTTCAGGAGGAAATTCGGCGTATCCTTTCCAAGATTTCCGCCTATGAGGGGACGGAGATGATCTCGAGTCCGATACCCATCTTAGTTTACTCGACATCAGGCAAGTTTAGTTATATCAGCGCCTTTTTTTTTCCTACATCCAAATCGGATGTACCCAGCCATCTTGGGGAGGATTCGCCTTCTTATATTTCTCCCTTTTTTTTTCTATTTAGACCCACAGCTTTGGGAGGCCGCTGTCCGCTACCAGGAGCAAGTCGGTGGGAGAGTAAGATTTCCCCTTCTGTATCTCAAGGTGGACAACGAGTCCGGGAAGGTTGTGGACGTGGGAAAAGTACTGGGACGATAGGCACGGCGTGGGAGAACCTAGAGGTCGTTTCAAGTCATTCAAATGGTTGGTGCACTCTCACACTCTCACTACACGCATATTTTATTTGTTCTGATTTTGTCGTCAATGGCCAAGCTACTTAAATATGATTATGCTAATAAGAAAATAACATGAAAATGTACATATAAAGTTTTAAGGCATATAGGTACGTTAATAGCATAAACATAATTAACGAGTTAATTTTATCCTAACGGCAAAGCCCATACCAATCATTTGTCTCATCTCATCATCGCACCCTCTTACGATCTAGCGGCGAATCACCTAGTTTAACTGTGAGTTCGATTATGGCGCCATGCATGTGCGGATGTGCTGCGATGGCAGGCAGCGACATTGAGACCATCAAATATATTCGCATTGATCATCTAGACCTTATCGTGTTAGCAAGCAGCCAAGCATGATCAGATGATATATTTACTTTAGAGGAAGATATATAGATATATACCGATCGTTAAGACTTGTTCTTTTCATTTACTTTGATCAAGGGCTTTGCAAGCCAGCTATTGGCAATATGGAAATATGGCAGGGGGAGGGGGTGGCGCTAGGTTTTGTTCTTTTCATTTACTTTGATTCCCTGGCTTCACCCCTGCTTGTCGTTTCCCCAACATATATTAAATCAATCACACACTGTTGACAACAATGTCGGTCTCATTTTGATTAGAATGATTGCCTTTTTTTTATTACCTGCTCTCGTCCAATAAGTGCATTCTTGATGACTGGTCGATGTTCGTCTCATCTTCAGGTTTGCGGACAAACATAAAATGTTTACGGCTGAAGCTGAAACAGCATCCTCCACCAAATCGACTGCACAACTTCAGCAGCACTCGTATTCAGAGGAGGAAGATTTGACCATGTAAGTTATCTCTTCGTTAAATTTTCTTTTGCTCAAATAAATGTTCACCCTCATTCCCCTACTCTCGTTACTGTTGTCCTCTTCAACTAGCTAGCAGCCTCCCAGTTCATTGCCACACCATAGATCCCCAACATTTGTTTCAGAAACATTTCGCCACCATACCACAGATCCCCAATCTTTGTTTTAGAAACATTTCTCCATTTCGCTTCTTCCCCAATATTTGTTTTAGAAACATTTCTCCGCCACACCATAGATCCCCAATATTTGATTCATAAACATTTCTCCATTTCGCTTCATCCTTGGGGTAACCCATTTTATTTAGCTGTTGAAAATCTAAGGTCTAAGGTTTAGATTCTATCAGGCTAGCAAAGGAGGTTTGATTATTTCAGCTTCTGCCACACGTCACGCGTACGTGTATATTGATATCCACTTTTTGCCACATATTTTTATTTTCCTATTTTACTAAAAAGTATTGCTCCTTTTGACTTAATACTAAGTGTTTTGATGTTCTTTCCTATTCTCTATTATTATAAAAATTGAAAATGTTTTTGTCGATACTTTGGTACGTCATTCGTGTATGAGTTTGTTTTTAAGTTCGTTCGCTTTTGGAATACAAATTTATATTTGAGTCAGGTCAGTCGCATAATAATAGAGACTTACAAACCTCTTTAAAACCTCTTTAAAAAAACTTATATGCTAACTTGAGATGATTGGATTCCTAATTACAGCTCATGATTTTCTAGAGAAAATATATATCCAAGCGAATTCTCACAGTGAATTTCACCTTAACTCACAGTGAATTTCACCTTAACTAAACCATATAACAATAATAAAATTAAAATAGCCTTCACCCGTTGCAACGCACGCAACGGGCATTTTTTCAGTTTACTAAAAAGTATTGCTCCTTTTGGATTACTACTAAGTGTTCTGATGTTTTTGTGTTCAGGTACAAATCCCATCAACAATTACAGGTCTCAGAGGAGAAAGATACAACCATAGAAGAAAACTCAGAGAAAAAGTGGCATGCACGTCTCATAGATGAATACATTCGTGGAATATTGGAAGGGTGCGTTTAATACACTATCCCCTCCTCTTTGAATATGTATTCAATGTTTTTTTTAATTAGCGTTTGTTTCATTTTGTTATGTCGTTTTGTTTATTAAGTTCTAGTTTTTAGTTGTGTAATTTTCCTGCTACCAAATAATTGACTTATTTTCTATACACCAAGGCACTGTGGAATATACTATTAATATGTAAGTAAACTTGTATTTTATTATTTCATGAATGAAGTCGCATTTTTTCTTGTATACAATATAATTAAAATTTCCATATGATGTTTATGTAACCTCACTCTATTTTCCATTTTTGGTTTCCTACACTAGCACAAACTCTATATCTCAACATAGACTATGTAGGTGTTTATCTATTAAAACATATATATCTTTCTCTACGAAAGTTGTTGATAGCTTGATTCTTTCAGGAATGATAACTCAGATACGGAGATTGAGGACGATGAGAATGTTCTCTCTAAGAGTCCTGTGGAAGTTGACCCATGTGCTATTGGTCAATTTCAACATTTCAAGGAGATGAATTCTCTCCGTGAAGAATGTGTCACTCCAAACCCTAAGAATGTTGACAGCTCATCAAAAATATCATCGCAACAAGGACATGCCAAATTGGCAGCAGGTTCTTCTAGGTAATTTCTGCACACTGATTGTAAACATGTTCTCTATTTCTGCTACGTAGTGTTTATATCATGGCGTCAAGATTGTAAGTTTGAAGCAATGGGCATATTAGACTGTGTCATTTTAAACATGTTTTTGGTTTAGTTAATGTTTTTTGCATGCTAAAGCTAAACTATGACATTTTTATAATGATGACTAATTTTGGGTTGAAACACAGCTCACACTATAAGGCAGTGGGATATCATGAGTATGCCGATCTAATCAATCGAATAAACAAGGGTGTACAACTCTATTCTATAGCATGCAAGAACTTTCTCAGAAAGGAATAGATGGACTTAGTGAAGCGTTCGTGGCATTCAGAAACTATTTTGCAGAAAAGGATGTTTTTGAGGTTTGTATGACACTCATATTCCTTATTCCTTATTTTCATTATTATCACTGCTTATTCTAAGTCGTGTTTGTAGGAAATTGATTACAAATTCGGAGAAATATTGCATCACTGCTCTCGTACTGTGGGAATTAGGAAGATTTATCATCACTATAATTTCACAGTTGAGATGAAAAATGATAAGGACTGTTGGATCCCTAGGGTTTATTTTGCGGAAGTCAAGATGAAGTATGGTTTCAAGTATCGTTTCTGTGCTCCTCTCGAGGCGACTGATGATGGTATGTGTTCTTATCTGTTTTTGCTTATTCAAACTTTGTGGTTCAAACAACAATGTAGGCATTTGTGCTATGTGGTTATTAAAAAACATATTTGAAATAAGTTATAACGTTGTGCTTCTAGTTGTATTGAAACTATGTTTAGTCATATTTCTAGTAAAAACATAAGTTGGGATTAGTCTTATTTCCATTCATTTACGTTTTGCTTTTGATTTTTATAAAGGAAAATATCATCCTAAAATGAATTTGCTGCACCAATATTTGAATTGGACTAGTAAAGGACATGAACAAGAACAAGTAGTTTATATAGTTTACACGATAGTTGTGCCCATGTGTTGTGATGGATGATAAAGAAATGTATTATAAGATCCAAAATAAAAATACAGTACATATAATCCTCAAATCTTAAAGTTGTGTATATGACCACATGAGATCAGTTAGTCCCCTACAGTATGCTAATGCAAAAAGAACGTGATTTTTTTTATAAGAGTAGAGAAATATCACTACACATTACTCTATGTTCAATTCTTTTGTGACTTGATGTCAAAGGATGCTGAGCCTATTTGATAAGGGATAGTCTTGCAGTTGCCCTCTAAAGGTGCATGAGGATTTGCCACTTAATGTCTTGCTGACATATTTTTGATCAAATAATACTTGGCTTAGGAAAAATGCATATATGAATAAATAAATGGTATTGACTTGTGAATAAATAAGTAGTATTGACTTGTTTTCTCATGTCACGAATCTATGTTTTAGTTATCATGTATACGCAAACCAAATATCCTTTTCTCATCTGAAAGGAGGCTTGCATACCAAATATACAAATGACCTGTACCAGCAAAAAACACAAATAAAAGAGAAACATAGCAAAAACATAATTTAGTTTCCCCATATTTGTAAATATATGTAGAGAACTGGGGAATAATCCACTAATTTTCCTTTGAAGTGCTCATTTGTGTTAAGAGGCAAAAAGGTGATAGGGTTTACCTTAATATGCTACATCTAAGTAGGGTTGATTGCTTCAAAGGGTGAAGTAGAGGGTCCTAAATAATGAGCATACCTCCTCTAATGATTAGTATTATTTATGTTCTCTGGGGACCGGAGATAATTTTCATCAGTTTTTACAAGCTTTATGATTATCAATTGCTTTATGATTATCAATTGTGTGATACACATTTCAACCTAACAAGCATGTTTCATGTCTTTAATTCATTGTCTGTAGGTCAATGTTATTCGTGCAAGAACCAAGGTATTGATAAACTCAAGCACCCATCTAGAGGAGGGTACTCAAAAGGTTATGATGGTGCTGTATGCAACCACCTTGGTGAGGATAGTTCTGATGAAGAGGACGAACTTATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036992