BGIOSGA037034

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Revision as of 08:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037034| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037034, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA037034

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037034, complete gene.

LocusTag

OS12G0160400

Ensembl Transcript ID

BGIOSGA037034-TA

Ensembl Protein ID

BGIOSGA037034-PA

Length

4673

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3254490..3259162

Sequence Coding Region

3254490..3254581,3255010..3255156,3255286..3255367,3255863..3255904,3255992..3256051
,3256492..3258171,3258301..3258402,3258523..3258666,3258766..3258891
,3258995..3259162

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3254490..3259162 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3254490..3259162 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTCGGTGATGCGCTGCGGCGGCTGTGCGAGGAGGCCCGGTGGTCGTACGCCGTCTTCTGGAAGGCCATCGGCGCCGCCGACCCCGTGCATTTGGTGTGGGAGGATGGCTTCTGCGGCCACGCATCGTGCTCTGCTGGATCTGAGGCTTCTGAGGCTGGGTGCGAGTCCGGCGGCGCCGTCTGCACGCTTGTTAGGAAGATCATGGCCTCGCAGGTTCATGTTGTTGGAGAAGGTACCATTGGCCGTGCTGCATTCACTGGGAATCATCAATGGATTGTCCATGAAACTGCCAATGATCACGGGCTCAGATCCGAGGTTGCTGCTGAGATGAACAATCAGTTCAGAGCTGGCATTAAGACCATTGCAATTATACCTGTGTTACCACGTGGTGTGCTGCAGCTAGGCTCTACTAGTGTGATTCTGGAAAACATAAGCTCTGTGCAACAATATAAGAAGCTGTGCTGTCAGCTAAACAACCGGTCGAGTATGGTCGCATCTGCTTCAGCCAAAAATGATTTGAGCCAGAAAGTTCAGTCACGATCTTTACATGGTCTCCCAAGTATACACCCTTATGAACAGTGCTATGGTCATGATGCCCGAGCCTTGTCAAGTAGCACATCAGCAAACACGGGCAGGAACACTTCCTTACTTAAGGTTGCACAGAGAAATGATCAAGCCATTAGAGAGCAAGTCTTATATGCTCCTGATATGAGGTTCAGACAGCAGCTCCCTTATAGTGACAGGAGAGTTGATATTAACACACACAGTAGTGCTATGAGCTCAGGTTTTATCTCGTCTATCTCAGCATCAGTGGAAAAGTATCCATTGTTGACGAACAACATTGGACAAGTAGAACACGGGAACATGGAAGAGTCATCAGGGCCCAGAAATGTTCTGTTAAAATCCCTTTCATGCCGGAACCCTGTTGTCCATGAAAATACTAACACGAGTCTATTTCATGGAGGGGATGAGGTGCCGGCTTTTCTGAATAGTCATGGGAGTTTTGATTTTCTCCAAGCAGGTCCTAGAGTAGTTGAGGCTAACTTGTATAACAATGGTACGTCTAGTCAAGTTTTAGACCAAAGATGCAGTTCCACTTCTGGGATGGCAGGGTATAAACCATCTGTTTCATATAAATTCCCCCACTCTGCTCAATTCATTGTGAAAATGGAGAATCCCAGAAGACAATCATTTCAAGACCCCGCAGCTCCATCCTCTGGTTCTGATGTCCAAGTTTCGAGTGGTTTGAAAACAACCACTCGTCAGTTTAACCCAGAGCATATGTGCCAAAACAAGAAGACAAATGAAGTCAATGACTCCAGTGCTGCTGTAAGCACGCAGGATGTGAAAAATATGGACCGACACAAGATCCTAGACATTTCTAATGAGAGAACCTCCTCATTTCTTATGGATCCTAGTACAGAAAATGATTTGTTTGATATATTTGGTACTGATTTTCATCAATTGCACCGCAGTTTTGATGGTGACCTCTCCTGGAACACTGCAAAGCCTCAGAGTTCAGACAGAGATGCACCTGAATCCTCAATTTATCTTGACAGTTCACCAGCCTTCGGTGCACAGGAGGATGAATTTTCTTATTCTGGGATTTTTTCGCTCACTGATACTGACCAACTATTGGATGCGGTTATCTCGAATGTTAATCCTGGTGGCAAGCAGATCTCTGGTGACAGTGCCTCGTGCAAGACTTCGTTGACAGACATTCCTAGCACTTCTTACTGTGGCTCAAAAGAAACGAAGCAATGCAAGTCATCTGGTGCTCCACCTTTGCTAATCAAGAATGAGTTGGCAGTTTCAAATTTTGTCAAACAACCATGTTTCCTAGAAAAGGCTGAAGATGGTTGTCTTTCCCAAAACAATGGAGTGCAGAAATCTCAGATACGCCTCTGGATTGAGAGTGGACAGAACATGAAATGTGAAAGCGTGTCTGCCTCAAACAGCAAAGGTCTGGATACAGCAAACAAGGCAAATCGGAAGAGATCTAGACCAGGAGAGAGTCCTAAGCCACGGCCAAAGGACCGCCAGCTTATTCAAGATCGTATAAAGGAGCTGCGGGAACTAGTACCTAATGGGGCAAAGTGTAGCATTGATGCATTATTGGAAAAGACCATTAAGCACATGGTTTTCTTGCAAAGTGTGACGAAGCATGCAGACAACCTCAAGGATTCTAACGAATCAAAGATACATGGTGGTGGTGAGAATGGCCCGCTTCTGAAAGATTACTTTGAAGGTGGTGCTACTTGGGCTTTTGATGTTGGCAGTCAATCTATGACATGCCCAATCATTGTTGAAGATCTTGATCGGCCTCGTCAGATGCTTGTGGAGATGCTCTGTGAGGATAGAGGGATCTTCTTGGAGATAGCTGACTTCATCAAAGGACTTGGATTAACTATCTTGAGGGGTGTGATGGAAGCACGCAAAAATAAAATCTGGGCTCGCTTCACCGTTGAGGCCAACAGGGATGTGACTAGAATGGAAATCTTCCTCTCGCTTATGCGCTTGTTGGAACCGAGCTGTGATGGCGGCGGAGGAGGCGTGGGAGATAATCCTAACAATGTAAAAATACCTCCTGGGATTGTGCAACATCCGGTTATACCAGCAACAGGCCATCTTAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAVGDALRRLCEEARWSYAVFWKAIGAADPVHLVWEDGFCGHASCSAGSEASEAGCESGGAVCTLVRKIMASQVHVVGEGTIGRAAFTGNHQWIVHETANDHGLRSEVAAEMNNQFRAGIKTIAIIPVLPRGVLQLGSTSVILENISSVQQYKKLCCQLNNRSSMVASASAKNDLSQKVQSRSLHGLPSIHPYEQCYGHDARALSSSTSANTGRNTSLLKVAQRNDQAIREQVLYAPDMRFRQQLPYSDRRVDINTHSSAMSSGFISSISASVEKYPLLTNNIGQVEHGNMEESSGPRNVLLKSLSCRNPVVHENTNTSLFHGGDEVPAFLNSHGSFDFLQAGPRVVEANLYNNGTSSQVLDQRCSSTSGMAGYKPSVSYKFPHSAQFIVKMENPRRQSFQDPAAPSSGSDVQVSSGLKTTTRQFNPEHMCQNKKTNEVNDSSAAVSTQDVKNMDRHKILDISNERTSSFLMDPSTENDLFDIFGTDFHQLHRSFDGDLSWNTAKPQSSDRDAPESSIYLDSSPAFGAQEDEFSYSGIFSLTDTDQLLDAVISNVNPGGKQISGDSASCKTSLTDIPSTSYCGSKETKQCKSSGAPPLLIKNELAVSNFVKQPCFLEKAEDGCLSQNNGVQKSQIRLWIESGQNMKCESVSASNSKGLDTANKANRKRSRPGESPKPRPKDRQLIQDRIKELRELVPNGAKCSIDALLEKTIKHMVFLQSVTKHADNLKDSNESKIHGGGENGPLLKDYFEGGATWAFDVGSQSMTCPIIVEDLDRPRQMLVEMLCEDRGIFLEIADFIKGLGLTILRGVMEARKNKIWARFTVEANRDVTRMEIFLSLMRLLEPSCDGGGGGVGDNPNNVKIPPGIVQHPVIPATGHLR</aaseq>

Gene Sequence

<dnaseqindica>1..92#521..667#797..878#1374..1415#1503..1562#2003..3682#3812..3913#4034..4177#4277..4402#4506..4673#ATGGCCGTCGGTGATGCGCTGCGGCGGCTGTGCGAGGAGGCCCGGTGGTCGTACGCCGTCTTCTGGAAGGCCATCGGCGCCGCCGACCCCGTGTAAGCCCCTCTCTCTCTCTCTCTCAACCTTCTCTCCTCCTGCTCCATCTTTGCAAGAGAACAAAAGAAAAGAAAAAGGGGATTTCAATGCCCATTTTTTGTTCGGTTTGGATTCTTGTTCGACATTCCCATTCCCGCTAGATTTCGTTTTGCCAAGCGTGCGCGCGGGGAAGGAAGGAGAAGATTCGCGTGGGTATATTCCTCGCCTGCTGCTGCTGCTGCTGCTGCTCGGTTTCTTGATACTGGATACTATCTAGTAGTAGTAGTACTTTTACCGGAATATGAAATAGATACTACAAGTTAGTGGGGGGAAAGAAGAAGATGAAATGACTAGTGATTTTGGGGGAGCAGGATGGAATGCTGAGAATGTGCTGTGAATTTGGCATCTTTGATGGTGATTCTCTTCAACATTTTTGTGCATTCTGAAGGCATTTGGTGTGGGAGGATGGCTTCTGCGGCCACGCATCGTGCTCTGCTGGATCTGAGGCTTCTGAGGCTGGGTGCGAGTCCGGCGGCGCCGTCTGCACGCTTGTTAGGAAGATCATGGCCTCGCAGGTTCATGTTGTTGGAGAAGGGTAAGCAAAAGAATATGATCGTTTCTTTGGTTTGAGTATTAATGGGGTTAAGTACAGTATTAGCTAATGCAATCTTGTTGGTTTATTGTTTTCATTAATTGGATGGATTCTTCACTTGTTGTCCTTCAGTACCATTGGCCGTGCTGCATTCACTGGGAATCATCAATGGATTGTCCATGAAACTGCCAATGATCACGGGCTCAGATCCGAGGTAGTGTGGTTTCCTCTTCCTTTCTTGTGAACTGGTATAAATGTTACCCAATTTCGGTTTTGTCTGGTCCATTTTTGCTGTTGCTGCCTCATTTAAAGCGTGGAGTCAGGGGATTTATAACAATCCAACAATCCCTGTGGGGTTGTTTTGTCCTCACCTTTATGTTCCTTGTGGTCTTCAAACTTTGGCATCTAGTGTAGTTTGCTTAATGGTTAGCTGAATAATGAGTGGTCACTGTGATGAGCTAGTTGCAGAAGCACACAAATGGACATGTGAATAAGTTGAAATGTCTATGGAGGTTCTTCTTGATACTGTTTTCCCTGATGCTGAAGTTAACCATGATCTACTTTTCATGAGGATCTATAATTTTCTCTTTCTTACTTGTTTTGGAGATTTTGAATTGGAAATTCGAGTTTTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTTGTTGTAATGAACAATGAGCTAATGGTTTTACTAATGACGGTCAGGTTGCTGCTGAGATGAACAATCAGTTCAGAGCTGGCATTAAGGTTAGTGGAATTTTGGTCCTTGCATGCTAGTACTAGATTATATGGATTGTTTACTTCCAAGTTCTTAACAAGTTACTTGCTCTGCAGACCATTGCAATTATACCTGTGTTACCACGTGGTGTGCTGCAGCTAGGCTCTACTAGTGTGGTAAGATAATAAAGTTTTCATAGATTAGTATATACTAGATCATCCTACATGTCTTGAAGTTTGTTCTCTTATGTTTTATCATATGGGCCATGACGTACTATTTTATGGCATTTACATTGTTGACTGGTCAAATATTCTGTTCTCTGGGTCCCTATATGTGTATATATATATATTTGTGGTAAGGTCCTAGGAGAACCCATCCTCCTTGTGGATGGTATTGGGAAGTTGAAAACAAGAACGAATTATTCTCTCTGCTATGTGTCTAGCCCTTAGGATTGTTGTGAAGAAAAGGGGGGAAAAAGACTCAGCTAACTGCATTAAGAGAATCCACTTCTGAGTTTTACCATAACCATTAGGACAGTAGAGCTCTGCTAAGCTTTGTTGTTTATGCTTTCTAAATTATTTATGTTAGAGCTTATGAATGCTTTATTTTCTTACAGATTCTGGAAAACATAAGCTCTGTGCAACAATATAAGAAGCTGTGCTGTCAGCTAAACAACCGGTCGAGTATGGTCGCATCTGCTTCAGCCAAAAATGATTTGAGCCAGAAAGTTCAGTCACGATCTTTACATGGTCTCCCAAGTATACACCCTTATGAACAGTGCTATGGTCATGATGCCCGAGCCTTGTCAAGTAGCACATCAGCAAACACGGGCAGGAACACTTCCTTACTTAAGGTTGCACAGAGAAATGATCAAGCCATTAGAGAGCAAGTCTTATATGCTCCTGATATGAGGTTCAGACAGCAGCTCCCTTATAGTGACAGGAGAGTTGATATTAACACACACAGTAGTGCTATGAGCTCAGGTTTTATCTCGTCTATCTCAGCATCAGTGGAAAAGTATCCATTGTTGACGAACAACATTGGACAAGTAGAACACGGGAACATGGAAGAGTCATCAGGGCCCAGAAATGTTCTGTTAAAATCCCTTTCATGCCGGAACCCTGTTGTCCATGAAAATACTAACACGAGTCTATTTCATGGAGGGGATGAGGTGCCGGCTTTTCTGAATAGTCATGGGAGTTTTGATTTTCTCCAAGCAGGTCCTAGAGTAGTTGAGGCTAACTTGTATAACAATGGTACGTCTAGTCAAGTTTTAGACCAAAGATGCAGTTCCACTTCTGGGATGGCAGGGTATAAACCATCTGTTTCATATAAATTCCCCCACTCTGCTCAATTCATTGTGAAAATGGAGAATCCCAGAAGACAATCATTTCAAGACCCCGCAGCTCCATCCTCTGGTTCTGATGTCCAAGTTTCGAGTGGTTTGAAAACAACCACTCGTCAGTTTAACCCAGAGCATATGTGCCAAAACAAGAAGACAAATGAAGTCAATGACTCCAGTGCTGCTGTAAGCACGCAGGATGTGAAAAATATGGACCGACACAAGATCCTAGACATTTCTAATGAGAGAACCTCCTCATTTCTTATGGATCCTAGTACAGAAAATGATTTGTTTGATATATTTGGTACTGATTTTCATCAATTGCACCGCAGTTTTGATGGTGACCTCTCCTGGAACACTGCAAAGCCTCAGAGTTCAGACAGAGATGCACCTGAATCCTCAATTTATCTTGACAGTTCACCAGCCTTCGGTGCACAGGAGGATGAATTTTCTTATTCTGGGATTTTTTCGCTCACTGATACTGACCAACTATTGGATGCGGTTATCTCGAATGTTAATCCTGGTGGCAAGCAGATCTCTGGTGACAGTGCCTCGTGCAAGACTTCGTTGACAGACATTCCTAGCACTTCTTACTGTGGCTCAAAAGAAACGAAGCAATGCAAGTCATCTGGTGCTCCACCTTTGCTAATCAAGAATGAGTTGGCAGTTTCAAATTTTGTCAAACAACCATGTTTCCTAGAAAAGGCTGAAGATGGTTGTCTTTCCCAAAACAATGGAGTGCAGAAATCTCAGATACGCCTCTGGATTGAGAGTGGACAGAACATGAAATGTGAAAGCGTGTCTGCCTCAAACAGCAAAGGTCTGGATACAGCAAACAAGGCAAATCGGAAGAGATCTAGACCAGGAGAGAGTCCTAAGCCACGGCCAAAGGACCGCCAGCTTATTCAAGATCGTATAAAGGAGCTGCGGGAACTAGTACCTAATGGGGCAAAGGTATCCTCTTGTTCACCCTCACACTTTAAATGTCCTTTATGATTATTTAGATCTTGAATCCCATTGAATTTAGTTTGGATGTAAATTCTGTTGTGTGCTGATGGCTAGCCTCATGTCAATTGCCAACAGTGTAGCATTGATGCATTATTGGAAAAGACCATTAAGCACATGGTTTTCTTGCAAAGTGTGACGAAGCATGCAGACAACCTCAAGGATTCTAACGAATCAAAGGTATACAATTCCTATCATTTTCTAGCGTCACAATGAATAGACTAGCTTGCAGCATATTCAAAGAGAAATTAATGTTGCAAACCTGATGTCATTGCTGTGCTATTGGTGAACTGTGAACAGATACATGGTGGTGGTGAGAATGGCCCGCTTCTGAAAGATTACTTTGAAGGTGGTGCTACTTGGGCTTTTGATGTTGGCAGTCAATCTATGACATGCCCAATCATTGTTGAAGATCTTGATCGGCCTCGTCAGATGCTTGTGGAGGTAAATCATTCTGTTATTGCTGTCTTTGTAGAACTAGTATTTTGTGATTCTTGATGCACAAACACTACTTTCCGTTTGTTGACGGTGGTGCCTATTCAGATGCTCTGTGAGGATAGAGGGATCTTCTTGGAGATAGCTGACTTCATCAAAGGACTTGGATTAACTATCTTGAGGGGTGTGATGGAAGCACGCAAAAATAAAATCTGGGCTCGCTTCACCGTTGAGGTAAGCAGCGCAATGTATTTGAGAAAGCTCTCTAGTTTTGGTTCACTATGAATGCAAGAACATCTTATCCTACATGCTGTAACATTTGATTATACCCATGCAGGCCAACAGGGATGTGACTAGAATGGAAATCTTCCTCTCGCTTATGCGCTTGTTGGAACCGAGCTGTGATGGCGGCGGAGGAGGCGTGGGAGATAATCCTAACAATGTAAAAATACCTCCTGGGATTGTGCAACATCCGGTTATACCAGCAACAGGCCATCTTAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037034