BGIOSGA037043

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Revision as of 08:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037043| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037043, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA037043

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037043, complete gene.

LocusTag

OS12G0163200

Ensembl Transcript ID

BGIOSGA037043-TA

Ensembl Protein ID

BGIOSGA037043-PA

Length

5840

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3492755..3498594

Sequence Coding Region

3492755..3492866,3492984..3493059,3493410..3493512,3494077..3494128,3494207..3494301
,3494656..3494721,3494863..3495372,3495975..3496274,3496820..3497146
,3497501..3497707,3497933..3498031,3498148..3498206,3498249..3498594

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3492755..3498594 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3492755..3498594 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGAAGCTCGGGAAGAAGGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCCGCCAAGCGTAACCGCAAGCAGCGCTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTGGGAGCGGTCGCGGGAACGAGCGCGATGGCGATGGCGATGACGAGATGCCGCAGCGAGCAATCGATAACGTCATGAACAACGGTGATGCTGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGATGAATGTGAATTAAACAGTGATCTGTCTGATAGTGATGGTTATCTTTCAGAGGACTCTGAATGTCTATATTATTCTGACAGTGAGGATGGCAATGCTGTCAATGATTGTTTTGTCCAAGATGGTTTAGATGGCGAGAATGATAAGATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTGAACAAGTTGATGGACAAGGACCCTGAGTTTGCAAACTACCTTGAAAAATGGCAATCAGAGTTGAAGAGTGATGGAAGTAAAGAGGATTCTGATGAAGATGAGATGGACTCTGTGGATAATGATGCTGACTCCAGTGATGAAAATCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAGTTAGTTGCAAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGATGCTTGTCGATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTGTTTCATCAGATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTAGAAATTTCGGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGGAAAACTATTGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAACTTACTGACAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTTTTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTGGGCCAGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGTGAATGAAGGAAATACAAAGCACATTGATTTTTTAATGGACTGTCTAGTGGAGCTCTATTCTCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTGAATTCTATTCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGACCTCAGGAAGGTAGATAACTGGCAATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAGGACTACAATATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCACTTATTCCCAGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAGCTTTCTAGTTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGATACCTCTCAGAAAGAACAAGAAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCAGCTATTGATGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAAGTAGCCACCATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCACTTCGTCGTCCTATTAAACGACTGATAGACCAGGTAGACGAGAACAAGAACATTGTAGAAAGGAAGAGAGACGGGGTCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTTCAGGACCTTCAGGCAGAGAAGAGCAGTGCAAAAATTTCACAGTTTTACAAAATTGTACCAAAAAAACTAAGTGGTCTGTATCCAAACATCCCCCGGCTGTTTGCAGGTAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGGATTATCGGAAGAAGGATGCTGGGAGCATGAATGTCGCACGCCATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAGCCTCTTGCTGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAKKLGKKARKFARKHLQSAAKRNRKQRSQFARRPRRGGSGRGNERDGDGDDEMPQRAIDNVMNNGDAAALVNGLEFPEDECELNSDLSDSDGYLSEDSECLYYSDSEDGNAVNDCFVQDGLDGENDKMNTEIKKQKKKLNKLMDKDPEFANYLEKWQSELKSDGSKEDSDEDEMDSVDNDADSSDENLSNDKILTRKTISEWCQLVAKEPKAPSLRSLLNAYRDACRFGVSKSPSVQRIQSTEVFHQIITFVLSEADNIFHALLEISDDVNKGKIMNLRSAKKWKTIEPLVKSYLQNSLDLLSQLTDNQILAFVLTRLRASAVLFSAYPSTSRRLLKILIRLWASGDHNLSLSSFLMIREVASLLPECLDLCLNKSYNTYLASSKLVNEGNTKHIDFLMDCLVELYSLDVQKSCERATTSIGQLNSILRQACKTKEKEDLRKVDNWQYINCVNLWVRFLCCNYKDYNMHPLLSSVVQIIRGVAHLFPGTRYLPLRLRLVQMLNELSSCSQMFFPIPSLLFDCLEFRDTSQKEQEKKAKVNFSSLLKVPKNMLKSRDFHEECILSAIDVLSAHFAQWCYHVSFPEVATIPLILLKRLHEQTTIESLRRPIKRLIDQVDENKNIVERKRDGVSFSPNDTTSVESFVQDLQAEKSSAKISQFYKIVPKKLSGLYPNIPRLFAGRKRSAMKCEHTFLATGLSEEGCWEHECRTPYRSTHFSLGDIYESELITSYDINNGIARVVETGEVNEPLAEQSFERECYRLLMHWAMSLLLSKVLSVNVTIC</aaseq>

Gene Sequence

<dnaseqindica>1..112#230..305#656..758#1323..1374#1453..1547#1902..1967#2109..2618#3221..3520#4066..4392#4747..4953#5179..5277#5394..5452#5495..5840#ATGGCGAAGAAGCTCGGGAAGAAGGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCCGCCAAGCGTAACCGCAAGCAGCGCTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTTCGTGCTCCCCCGTCGTCTCCTGCTCCTCCCTCTTCTCCGGGTGGTTTGGTTCCGTACGGCTCCAGTCCACGGGGGCTCTTCTGTTGGTAGCTCATATGCTCTTCTTTTCCTCAGGTGGGAGCGGTCGCGGGAACGAGCGCGATGGCGATGGCGATGACGAGATGCCGCAGCGAGCAATCGATAACGTCATGTAATCATGTTTCACCTCTCCTTACGGTTTTGTTTATTTTGGTAGGCTTATCAGGATGCTTTCCAACATACAATAGGGTGAAAACTAGAAGGGGAGGGTGCAATGCTTTGCTAGGTTCACACATTTGATAGTGTCGGTTTGTTTTTTTGGATGGAATTGATCTGGTCTGAATTGTACTAGATATTGAGACTGACCAGAACTTTGCTTGCAACTCAAATGATGCAATAGACTAACCTCAATTCAACTTCATAACTTTACAACTTCATTAATCATGATAATACTGCACAATAGTTCATTTAGTGTTTCTTTTATTTAATTTACTAAATAAATTCGAAATTCTTTTCCTCTAGGAACAACGGTGATGCTGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGATGAATGTGAATTAAACAGTGATCTGTCTGATAGTGATGGTTATCTTTCAGAGGTATGTCTGCTTATCCTTTTCAGAGGATCTTATTCATTGATCCACAACCAACATTCATTCCATCATAAAGAATCATGCTTTTTTTAAAAAAAATGTTCACAACTGTCCATATTTACAGTATTGTGATGCCTTCCATGTATTGTGCTCAAGCATATAACAAATTTGTATTTGTCCAAGCTTGAGCTTGGTCCACATATATCAAGCCTTTTTCTTAATTCCATCCTATTGACAAGGGCATAGGCATTATTCCTTTTTATTCTTGTTGATAAACTTTCTTCACAAATCTGCTTATTTCTGTGCAAAATCCAAGTAGGAGACTGTAGTATCTGTTGGCAAGAGATGAACAGTTTTTTGGTATGTTAGTACATTATATATCAAGTATGATGGTTGGCTATCATTAGCTCATCACTATAGCAGCCGTAGTCACCATGGCTCAGTTCTTGCCAATAGTGTGTCATCAAGGCTCCCAAAACCTCTATAGCATGCTTTGGATAAGTTTGCTGTTTCCAACCAGTGACATTATCTATTGTCTGTTATATTGCCCCTGAATTGCTCGTTGTGCAGGACTCTGAATGTCTATATTATTCTGACAGTGAGGATGGCAATGCTGTCAATGGTTAGTGTTTGATGATGCAAAACTTAATTCAGTTTTATGCTGCTCTAGTATATCCAATTATCTCAATATTTTGTGCAGATTGTTTTGTCCAAGATGGTTTAGATGGCGAGAATGATAAGATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTGAACAAGTTGATGGACAAGGTGAAAATTGCCTCTCTAGATTTGGCCATGCGTGCTTACTAGTATATATATTTGTTATTTACCACAATTTTAGGTTTATCTGCCTTTTGACATCTTGCACTTGGTTGCTGATTTACAGTTCTATAGTTGTGTTTGCATCACTTTATTCTTATTGAATGTAAACACAGCAATGTTTTATTCTGAATTACATTGGTTATACATCCAGTTATGTAGCTCAAGTACTAGACATTCATTTGATTGAGCAGATGATGTGTTCGTGCTTTTAATAGTCGCATTTTCTGGAATTTTAGGGCCTTACTGTATATTTCTTTGGGTATTTTGTGTTCAGATTGTCAGAATTAATTTTATTTGTAGGACCCTGAGTTTGCAAACTACCTTGAAAAATGGCAATCAGAGTTGAAGAGTGATGGAAGTAAAGAGGTAAGATTGTCTAATTGGTTGTTCGTGCCTGAGCCGCTGCAATTCAGATTACACCTTTTTTTATATATAATTTACTTTCCATGTGAACAAATCTTGCCAAATAAAATTTGTTTTTTATGCTTCATTTTCAAACTTCAATAGGATTCTGATGAAGATGAGATGGACTCTGTGGATAATGATGCTGACTCCAGTGATGAAAATCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAGTTAGTTGCAAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGATGCTTGTCGATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTGTTTCATCAGATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTAGAAATTTCGGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGGAAAACTATTGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAACTTACTGACAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTTTTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGGTATTTCTGTCTGTTGGTGATGCTGCTTGTTAATACTTAACTTGATTTTGTGTGTTCTCTTGTACCCAAGGGTATTCATGTTTGAAAGCTATTCTAGTCAACTATACCTTATCTTTTGGTGAAAATTAAATTTGTTCTCTTTACATTGTAACCATTTGAGAAATATCTGCTATTCCAGCACTTGTTTGACTGCTATGCTGTAGAGATGAGGAGAAATGATGGTTCTATTCGCTGGTGCCTTGTTATATGGACATTGTGTTTGTATGATAGCTGCATGCTTTTACTTAACTCATTTAAGCCATCTATATCTGTTAATGCTTTTGCCAGCTTCAAAACAGTATGTTGTTCCAAAAATCTAGTGTAATTGACCATTAATGCTTCTTCCATAGCTCCTTTTTAACCATTTTAGGTCCAGTACACTTCCTATTGGTCCTGATGTGTCAGAATTGTTGCGGTATCAGTATCTTATATTGTGCTGACATACATTTGTTGTTCAGTTACCCTATGATTATCTGAAAATAGGTTCTATAATATATCTGCTGTGTCAAATTCTTTTCTTATTAGTTGACATTAGCTCATGGTATATTGTTAAAACTTTGCAGATCTTAATTCGTTTGTGGGCCAGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGTGAATGAAGGAAATACAAAGCACATTGATTTTTTAATGGACTGTCTAGTGGAGCTCTATTCTCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTGAATTCTATTCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGTATATACTGCTGCTTAATTCTAGTGTTGTGTTTGCACTTCTATTGTATCCTACCTAGAAAATCCTCAGGTCTCTTTTTATTTGTTGGTCTGGATCCAGGCCTGAAAATGGTACCTAAACACCAGTTTCATTAAAATGCCCTTCATTCAAACATTCTGGTTTGTATATTTTTTTCCCTGTCTGAAGACTGAAGTGAGTAAAGTCAAAGGAAATCCTGAGGCATATATGTTATGTTGTTGATTAGTTCCTTCTTGCACCGTGAACGTTGAATTCACAAAGTGCAGTCAATCAGTTATCGCCACATCTTTTTTACAATTTAAAATTTATGACATGCCAATTACATTTTCTTGCTAGGTTGCTATGAATAGAAAAGTTCTTTCTGTACAGTCATACAAGAAAAAACTTCTTGCTGATATACATGCCCTTTTCACATCTTTAAAAGAAAAGGATAGGATATCTGCTCTTGTACATTAAACGCCTTGCTTTCTTTTTTGCTTTGTTGGCACCACATGGATATTTACATGCAATCTCGACTGTTGTTGCAGGAAGACCTCAGGAAGGTAGATAACTGGCAATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAGGACTACAATATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCACTTATTCCCAGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAGCTTTCTAGTTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGATACCTCTCAGAAAGAACAAGAAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGTATGCCACTTTACTGGGCACATTTTGCGATGATAATGTGTGGATGTTATGTGATCTTTCATGCCTTTCTAAAGCCACTAAAATGACTCGTTATCATTCTACCAGGTCACTTGCCTTAACTCAGTAAGATAAACTTATTATAAGACTAGTGTCATTAGTGGCCTTTTTAGCATTCAAGAATGATCTTTTTCAATGCATGGGTAACCTGTAAACTCACCCTTTTCTTAGTTATATTTCTTGATTGGTTCTTTTAACTTGCTTTACAATAATACAGTTTTTTTTAAGTTCTGTATTTTTATCATTTGATTCATCACCTGAAAATGGTTTTGATTAACTGTTGTTTGCTTTGTTTAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCAGCTATTGATGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAAGTAGCCACCATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCACTTCGTCGTCCTATTAAACGACTGATAGACCAGGTGAATATACATATGTTCCACATCTGTCACCATCCCTGTAATATTTGTGTGACAGTGTAATGTTACTCATAGATGCATTACTGTGAATAGATTTAGTTTAAGCTCGCTTCATTTCTTTTGTGAATGGGGCCAAAACGCATTATCTATTTGACTATTTTTTGCATCTTAATTCACTGTTGCTTTTGAGTTTAATATGTTAGCTTCATTTTAATACTTCAATGACAGGTAGACGAGAACAAGAACATTGTAGAAAGGAAGAGAGACGGGGTCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTTCAGGACCTTCAGGTTTGATTTCCTCCCTGTAATGATTTTTTTGTGCAATCACCTGTTATGCCTGCATAGTTGCATATACTCGATTCTTCTTCCTGGGGTTTGCTGAAAAACTCTTGTCTTGAATACAGGCAGAGAAGAGCAGTGCAAAAATTTCACAGTTTTACAAAATTGTACCAAAAAAACTAAGGTAAGGACAATGTTTGATGTTGATTGACGAAGTCATTATCAGTGGTCTGTATCCAAACATCCCCCGGCTGTTTGCAGGTAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGGATTATCGGAAGAAGGATGCTGGGAGCATGAATGTCGCACGCCATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAGCCTCTTGCTGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037043