BGIOSGA037052

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Revision as of 08:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037052| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037052, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA037052

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037052, complete gene.

LocusTag

OS12G0165900

Ensembl Transcript ID

BGIOSGA037052-TA

Ensembl Protein ID

BGIOSGA037052-PA

Length

6490

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3652636..3659125

Sequence Coding Region

3652636..3652747,3653809..3654267,3655257..3655742,3655903..3656118,3656436..3656938
,3657082..3657148,3657247..3657304,3657593..3657731,3657872..3657988
,3658101..3658278,3658491..3659125

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3652636..3659125 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3652636..3659125 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATCACGAGTCGTTCTCAGGAAAAGGGAGTGGAGGATGGGGGTCGCTACTCGCGCCTCCTCCTCCAGGGGCATTGCTCGGGGCAGTTGATGGACGCCGTGAACGAGGCATTTGGGCAGTCGTCGACTAGCCCTTTTGGGCAGACCTCAAGCAACCCATTCGGGGCACAGACAGGCGGATTTGGCCAGGCGAACACTACCACCACCAATCCTTTTGCGCCGAAACCCTTTGGCAGCCCGATCACCGCATTCGGGGCACAGACAGGAAATTCACCTTTTGGCACGACGTCCACCGGAGCCTTTGGCCAGCCATCTGCTCCGACGTTTGGCTCGACGTCTACCGGAGCCTTTGGCCAGCCATCCGCTCCAGCGTTTGGCTCAATGTCCACCGGAGCCTTTGGCCAGCCATCCGCTCCGGCGTTTGGCTCAACGTCCACCGGAGCCTTTGGCCAGCCATCCACTCAGGCGTTTGGCACTCCGTCATCCTCTCCATTTGGGAGCTCTACACCAGCTTTTGGTGCATCACCAGCCCCAGTGTTTGGTGCCACATCGTCTACCTTTGGCAGCGGATCATCATTGTTTGGACAAAAGCCAAGCTTTGGCGGTTTTGGTTCTTCTCCTAGCCAGTCTAGTGCTTTTGGAGGTCCATTCCAGCAAGCACAACCAGCATTTGGTGGCAGCACTTTTGGCGCGGCAAGCACGCCGACCTTTGGCACCACAACTACACCATCCTTTGGTGCCACAACTACACCAGCATTCGGCACGACCACCCCAGCATTTGGTTCAACATCTACATCTGTATTCGGTGCTTCAAGTGCCCCAGCATTTGGTTCTACAGGCTTTGGTTCATCCACCACTCCTGGTTTTGGATCTTCAGGTACTACAGCCTTTGGTGCAGATAGTACTCCAGGATTCGGAGCTTCAAGCTCTGGCATGTCAACTAGTGCTTTTAACTTTGGCTCTTCTCCATCTTTTGGTCAAACAATACCTACATTCGGTAGCACTCCCTTTGGAACAACTTCATCTACTTTTGGCTCACAGACATCTACATTTGGATCACAGACAACAGCACCAGCATTTGGGCAAACATCATTTGGGAATCAAGCTGGAGGAACCAGAATACAGCCTTATACTCAAACACCAGATGCGGACAGTGCTACAAGTGGTACTCAGCCTGCTGCAAAATTGAACTCGATATCAGCCATGGAGGCATACAAAGTGAAGAGTCATGAAGAGCTGAGGTGGGAAGATAACCAGCGTGGAGACAAAGGTGGACCAAATCCTTCAGGAACTCCAGCAGTGACCCCTAGCTTCCCATCTCCAGTCAACAACCAATTTTCCCCAAACCCTCCAAATGCATTTCCATCAGCATCTGCGAACAATCCATTTGCTCCCAAGCAGCCTTCAACTGGTTTTGGTTCTATTTCATCCGTGTTCAATTCAATATCCAGTAATACAGCACCAGCAAGCTCAAGCCCATTTGCACCAACTATAAGTAACCCATTTCCTACACAAACAAACTGTTCTCAGTTTGTAAATTCCGCTTCTAGTCCTTCTCTATTTGGCACAATAAACCAAAACTCATTCAGTACGTCTGGGACTAACAGTCAATCAGTTGGGCTATTTGGTCCTTCCCCATCAATTGTGCAACAGCCCAGCCAGGCATCATCAGGGTTCACATCGAGCTTCCCATCTTTTTCTGGGAGCCTATTCAGCCCACCTACTCCTGTGGCGACTGGTGGATTGTTTGGCAGCGGGCCTTCACCATCAACGCCGACATTGCAACAACCTGTCCCTGCTCAAATGCCCAGCATTTTGTTCCAACCTCCAGCTCAAACAGCTTCTACTGGTGGATTTCCTGGCGTTTCCAATACAAATCAGGCACCTTTTGGACAGCCAACCCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTAAAAATCCATTCGGGATGCTGCCAGCGACTCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCTGTTCAATATGGAATCTCAAGTTTGCCGGTTGCTGAGAAGCCTCATACGAGCAGGGCGTCATTATCCATGGTGGTTCGTAGGCATTTGTCACAGAGAAGGATAAAATTGCTGCCAAGAAAATATAATCCGATATCTGATGGCAAGGTTCCATTCTTTGCTGATGATGAAGAATCTCCTGCAACACCAAAAGCTGATGCTTTTTTCATCCCTAGAGAGAACCCAAGAAATCTGGTAATCCGACCAATTGATCAGTGGCCTTCACGTGGCACAATGGACAGGCAACAAATTCCAAAGAATTCAGCTGATATTGATGAACATGAAGGCTCTTTGGCTGAGAGGGAGTTCAACAAGACTGCCATTTCACCAACCAGGTCTACTTCAATCGAAAATGGCATCCACCGTGATGACCGTGCATCAAATGAGCCTGATACTGTGACAAGGCATGGGAATGGTGCTTCTGTTGAGAGGCTTGCGCCTAAGCTAGTGCATGCCGATTATTACACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGTGCTGAACCAGGCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATTGTTGCGGTAGCATCAAGTTTATTGGAGAAACCAACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAATTCAATAACCGTGAAGTGATCGTGTACAAGGACGATAGCAAGAAGCCCCCTGTTGGTGAGGGTCTGAATAAAGCTGCCGTGGTGACCCTTCTGAATATCAAGTGCATGAACAAGAAGACGGGGGAGCAGTACACAGAGGGTCCGAGGGTGGACAAGTACAAGGAGATACTGGTGAAGAAGGCTGAGGAGCAGGGTGCTGAGTTCATCTCATTCGATGCTGCCAAGGGCGAGTGGAAATTCAGGGTCAAGCATTTCAGCTCCTATGGCTTTGGTGAAGCTGAGATCGACTCTTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MGITSRSQEKGVEDGGRYSRLLLQGHCSGQLMDAVNEAFGQSSTSPFGQTSSNPFGAQTGGFGQANTTTTNPFAPKPFGSPITAFGAQTGNSPFGTTSTGAFGQPSAPTFGSTSTGAFGQPSAPAFGSMSTGAFGQPSAPAFGSTSTGAFGQPSTQAFGTPSSSPFGSSTPAFGASPAPVFGATSSTFGSGSSLFGQKPSFGGFGSSPSQSSAFGGPFQQAQPAFGGSTFGAASTPTFGTTTTPSFGATTTPAFGTTTPAFGSTSTSVFGASSAPAFGSTGFGSSTTPGFGSSGTTAFGADSTPGFGASSSGMSTSAFNFGSSPSFGQTIPTFGSTPFGTTSSTFGSQTSTFGSQTTAPAFGQTSFGNQAGGTRIQPYTQTPDADSATSGTQPAAKLNSISAMEAYKVKSHEELRWEDNQRGDKGGPNPSGTPAVTPSFPSPVNNQFSPNPPNAFPSASANNPFAPKQPSTGFGSISSVFNSISSNTAPASSSPFAPTISNPFPTQTNCSQFVNSASSPSLFGTINQNSFSTSGTNSQSVGLFGPSPSIVQQPSQASSGFTSSFPSFSGSLFSPPTPVATGGLFGSGPSPSTPTLQQPVPAQMPSILFQPPAQTASTGGFPGVSNTNQAPFGQPTPSQSNMVMQPALVKNPFGMLPATPQMSIGNGGSAPSVQYGISSLPVAEKPHTSRASLSMVVRRHLSQRRIKLLPRKYNPISDGKVPFFADDEESPATPKADAFFIPRENPRNLVIRPIDQWPSRGTMDRQQIPKNSADIDEHEGSLAEREFNKTAISPTRSTSIENGIHRDDRASNEPDTVTRHGNGASVERLAPKLVHADYYTEPSLEELAAKERAEPGYCSRVRDFAVGRHCCGSIKFIGETNVRGLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKAAVVTLLNIKCMNKKTGEQYTEGPRVDKYKEILVKKAEEQGAEFISFDAAKGEWKFRVKHFSSYGFGEAEIDSC</aaseq>

Gene Sequence

<dnaseqindica>1..112#1174..1632#2622..3107#3268..3483#3801..4303#4447..4513#4612..4669#4958..5096#5237..5353#5466..5643#5856..6490#ATGGGGATCACGAGTCGTTCTCAGGAAAAGGGAGTGGAGGATGGGGGTCGCTACTCGCGCCTCCTCCTCCAGGGGCATTGCTCGGGGCAGTTGATGGACGCCGTGAACGAGGGTACGCTGTGGGGCTAACCATTGGGCCTGTTCGGCTGCCCTTTTTTGCAGCCACACGGTAGCGAGCTGCAGCTGCAAGCAGCACAGCTGTAGCCGCACAACACAAGGTTGCAGCCGCAGCGCTGCCGCAGATAGAACAGCCGAACAGACCCATTGTACATGCTCTTTGCAGTTTCGGTTATAGGGGCTATACAATCTACACCACGAAGTGGGAAATTTAACTATTTGCCACTCTTGTGACATGACAATTAACGATTTACCACGCTCTGTCAATGACACGTGGGCCCTCATGTGTCTATGATATGTGGGTCTAGTGGCAAATCGTTAAGCACCATTCGTAAGAGTGGCAAATAGTTAAAAGCCCCCGACGAAGTTGCCCTTGCTAAAAACGGGCCATATGAGTCATTTTGTAATGGGCCGTATTATGTTGGCGGAAATTCCAAGCGGGCCCAACAAGTCGGCGTAAATTCCACGCGAGCCGGCCGAAGAAGTAGATGGAATTCGATTTGGGCCCAAAGAAGTTGGCGGAAATTCCACGCAGGCGCGGAAGCAGAACAGGCAAAAGCCCTCGACGTTGAGCGTTGAAGCCACGCGACGCGGAATAGATCAGCGTCGGTATATATACCTTCTCTTCTTCCCCCTCTCTGCCTCCGCTTCCCTCCGCCTCCTCTCGCCGGTTTCCTTCCCATCCCCGCCGAGTCGCCGTCGCCACCGCCGCCGAATCCCCCGCTCCCCGCCGCGGGAAGTCGCCGCCGACCTCCCACCGCACGCCGCGCGGTCCTCTTCAGATCCTAATCGCCGGCATTGAGCCACCCTACCCGCCGGCGATTCCGCCGACGCAGAGGAGGGGAGGGGGAGGAGGAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATATCTTCCACTGTTGATGCATCGTCAATGAACTTTTCAGCGAATTAATTGCGCGCGATGCATAACATGCTAATCTATTTAGTTTTTGCAATGCAACAAGTTTATATCTCCATCTGATGTGATGATTTGTTCGTCCCTTGCAGCATTTGGGCAGTCGTCGACTAGCCCTTTTGGGCAGACCTCAAGCAACCCATTCGGGGCACAGACAGGCGGATTTGGCCAGGCGAACACTACCACCACCAATCCTTTTGCGCCGAAACCCTTTGGCAGCCCGATCACCGCATTCGGGGCACAGACAGGAAATTCACCTTTTGGCACGACGTCCACCGGAGCCTTTGGCCAGCCATCTGCTCCGACGTTTGGCTCGACGTCTACCGGAGCCTTTGGCCAGCCATCCGCTCCAGCGTTTGGCTCAATGTCCACCGGAGCCTTTGGCCAGCCATCCGCTCCGGCGTTTGGCTCAACGTCCACCGGAGCCTTTGGCCAGCCATCCACTCAGGCGTTTGGCACTCCGTCATCCTCTCCATTTGGGAGCTCTACACCAGCTTTTGGTGCATCACCAGCCCCAGTGTTTGGTGCCACATCGTCTACCTTTGGCAGCGGTTTGTACTTCCGGCATTCATTCTCTTCCATATGTTATTTTATTCAACTTAGAACCATGTATACTATGCACTTTTACTGGATATGCACTAGTCGTGCATATTTGTTCAATATTTCATTGCTATCATAGTAACTCTGGCTATAAAGCCGTTCTGGCTCTCAAATATATTCAGTATATTGTAGATCCTTAGCTCGTTGGACATTTCCTTTTCTGGTACCTACAGTTATGCAATCCCGATTTTATAAACTGATGCTCTCGCGCTTGTTTATTCACAAAAGAAACAATGCTAGAAAATATGTTTTTTATTTGGTTCTCTTGTTGGGCTGGCAGTGCTGGTTGTCCAACTTTGCTGAGAAATTCTACAACAGAATCTGCCTAGACTGTCTAGTGCAACTTTATTGATTGTGCTATCCAGGACAAACAGTTTGCAACCAAGTTTGTGATCTCTATATGACTAGTTCTGTAGAAGAATTTCGGGGCTTGAATTTTGTGAAAGATAAGGTAATATTTGCTTGACCACTAAGTACCAAAATGCGGGAGTAAAAGGTGAGAGAGCCTGAGGATGAAAATGTCAATTCTCCTTAAATTGGCAACTTAACTATCCACTGTGATGAGGCAAGCACACATATGTATTACAGTCTAGCAATATTTTATAATAAAATTTAAAATGGCAATCTTGCCTCATCTAAGTACTACATAAGTGTGCTTGCCTCATCATAATCTTTCAAACTTGCTTAAGGAAAGTAAAAAGGCTAACATATGTATATCTTGTAAGTTCTCCCATAGTAGTAAGTTCCACTGTGAGTATTTTGATCAAACATGCTTATAGGAGAAACTTGAAATATGATATGTGATGTTTTCTACATTTGTTATAGAGATACTCAGTTTCTCAATAATGAGCGATGTTGTTTCATCATCTTGAGTTATGAATTGATCTTTTTGATTTATCATTTTGTAGTATGTGTGACATGATAACCACCAAATTTGCAGGATCATCATTGTTTGGACAAAAGCCAAGCTTTGGCGGTTTTGGTTCTTCTCCTAGCCAGTCTAGTGCTTTTGGAGGTCCATTCCAGCAAGCACAACCAGCATTTGGTGGCAGCACTTTTGGCGCGGCAAGCACGCCGACCTTTGGCACCACAACTACACCATCCTTTGGTGCCACAACTACACCAGCATTCGGCACGACCACCCCAGCATTTGGTTCAACATCTACATCTGTATTCGGTGCTTCAAGTGCCCCAGCATTTGGTTCTACAGGCTTTGGTTCATCCACCACTCCTGGTTTTGGATCTTCAGGTACTACAGCCTTTGGTGCAGATAGTACTCCAGGATTCGGAGCTTCAAGCTCTGGCATGTCAACTAGTGCTTTTAACTTTGGCTCTTCTCCATCTTTTGGTCAAACAATACCTACATTCGGTAGCACTCCCTTTGGAACAACTTCATCTACTTTTGGCTCACAGACATCTACATTTGGTAAGTTTTTGTCCATGATCTTATTGTCTTCCCCTCCACATGCTATACTTCTTGGTGTTAGATTCTTTTGTTATCCCCTGATGCCTCACCTCTGCAATCCTTTTTTGTCTCTACTTCTATCCCCTGATGCCTTATCTTGAATGTTTTCTTTGAGTTTCAGGATCACAGACAACAGCACCAGCATTTGGGCAAACATCATTTGGGAATCAAGCTGGAGGAACCAGAATACAGCCTTATACTCAAACACCAGATGCGGACAGTGCTACAAGTGGTACTCAGCCTGCTGCAAAATTGAACTCGATATCAGCCATGGAGGCATACAAAGTGAAGAGTCATGAAGAGCTGAGGTGGGAAGATAACCAGCGTGGAGACAAAGGTGAGTCTTTTTTTGGGATTGTGTGTTTTGCACTTCGTTTGTAAACAATCTCTTTAACCATCACATTTAATTGCTTTTGCATGAACTCTTTATCATGTTTTTTCTTTAAAAAAATAAACGAAGTTACTTTTATGTATTAGTTGCTGCGGTGGTGTAGTTCAAGCACTTTTGGTTGATTACAAATTTAAAATGGCAAATTATACTGATAGAGCTAGCCTTTTATGCTTCTGTAGTTCATTCTGCATTATTATATGTTTAGTTCCATATGCCTTCTTTCTGTACAATTTTTGAGTAATTCATTATTTTTTAACCCTCAGGTGGACCAAATCCTTCAGGAACTCCAGCAGTGACCCCTAGCTTCCCATCTCCAGTCAACAACCAATTTTCCCCAAACCCTCCAAATGCATTTCCATCAGCATCTGCGAACAATCCATTTGCTCCCAAGCAGCCTTCAACTGGTTTTGGTTCTATTTCATCCGTGTTCAATTCAATATCCAGTAATACAGCACCAGCAAGCTCAAGCCCATTTGCACCAACTATAAGTAACCCATTTCCTACACAAACAAACTGTTCTCAGTTTGTAAATTCCGCTTCTAGTCCTTCTCTATTTGGCACAATAAACCAAAACTCATTCAGTACGTCTGGGACTAACAGTCAATCAGTTGGGCTATTTGGTCCTTCCCCATCAATTGTGCAACAGCCCAGCCAGGCATCATCAGGGTTCACATCGAGCTTCCCATCTTTTTCTGGGAGCCTATTCAGCCCACCTACTCCTGTGGCGACTGGTGGATTGTTTGGCAGCGGGCCTTCACCATCAACGGTAAGCTTCTTTTTCTAGCTATTTTGATATTTTGGCCAGAGTGATTTTCTTTATAACTCTGATACATTTATCTTTGTACTACTTATCTTTCCTTTGTAAAAGTATCACTGTTAACAAATTGACTCTGCCCCTTTATGATTAAGCCGACATTGCAACAACCTGTCCCTGCTCAAATGCCCAGCATTTTGTTCCAACCTCCAGCTCAAACAGGTTAGTGTTTTGTGTCCTAATCGATCTCCAGTTCTTCTACTTGGAGAGCAAAGTCGAGTTAACTTACTTTTGTTCATGTACATACATGGTTACTGCAGCTTCTACTGGTGGATTTCCTGGCGTTTCCAATACAAATCAGGCACCTTTTGGACAGCCGTATGATCTCTTCCATCTACTTCTCAAATGCAAAAAAATGTTCTTTTCCGTTATATATATTTCTTGTAGATAGGCAGAGCAACTGATTTGCTTTGGTAAGTTGAATATGAACAACAATGTGATCGTTTATACTGATATGTGATGTAGCGATTAACAGAACAGTGTTTTGAGAAGTATCACAATTCAGTTACCCTCAAATGAACTTTGGTAAGCATTGGGAGTTTTTTTTAATGACAGATTAATATGTCCTCATTTAAGTTGCAATTTCCTGTTTCATATTAAATGCAGAACCCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTAAAAATCCATTCGGGATGCTGCCAGCGACTCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCTGTTCAATATGGAATCTCAAGTTTGCCGGTCAGTGTTATTACTGCCTTAACTATCTTGATTGTCCTATTAGATGGTTTAGATTGTCTGCTGGCAAGTTGCTCTTCTGAGAATTTCAGAAAGGACAGAAAAGTTTGCATGTTTGATTGATTCATTCTGCTGTCTTGCAGGTTGCTGAGAAGCCTCATACGAGCAGGGCGTCATTATCCATGGTGGTTCGTAGGCATTTGTCACAGAGAAGGATAAAATTGCTGCCAAGAAAATATAATCCGATATCTGATGGCAAGGTAAAGACTTGCAAGCTTTTGTATGTCAAGTTGTTTTATGATTTTTTTGTTGGAATGTTCTGCAAGCATTAAGAAAACATTTGACATGATGCTCATCTTTCTTGTTCTTTAGGTTCCATTCTTTGCTGATGATGAAGAATCTCCTGCAACACCAAAAGCTGATGCTTTTTTCATCCCTAGAGAGAACCCAAGAAATCTGGTAATCCGACCAATTGATCAGTGGCCTTCACGTGGCACAATGGACAGGCAACAAATTCCAAAGAATTCAGCTGATATTGATGAACATGAAGGTAATTCTTTCTACTTAAGTTCTACTACTTCACATACATGCAGTTTTGTAGTGTTAAAGATTTTAGCATCCCCTTGTGCCTCTCTTCCATGAGATGTGCAGCAAAGGCAGCATGTGCGGCATTGTAAATCATTGTTAAAACTACTATATTTGTCTCTTCATTTTGCACCTAAATGTGCAATTATCGGATGTTAATTTGAGGATGTTTTGCAGGCTCTTTGGCTGAGAGGGAGTTCAACAAGACTGCCATTTCACCAACCAGGTCTACTTCAATCGAAAATGGCATCCACCGTGATGACCGTGCATCAAATGAGCCTGATACTGTGACAAGGCATGGGAATGGTGCTTCTGTTGAGAGGCTTGCGCCTAAGCTAGTGCATGCCGATTATTACACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGTGCTGAACCAGGCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATTGTTGCGGTAGCATCAAGTTTATTGGAGAAACCAACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAATTCAATAACCGTGAAGTGATCGTGTACAAGGACGATAGCAAGAAGCCCCCTGTTGGTGAGGGTCTGAATAAAGCTGCCGTGGTGACCCTTCTGAATATCAAGTGCATGAACAAGAAGACGGGGGAGCAGTACACAGAGGGTCCGAGGGTGGACAAGTACAAGGAGATACTGGTGAAGAAGGCTGAGGAGCAGGGTGCTGAGTTCATCTCATTCGATGCTGCCAAGGGCGAGTGGAAATTCAGGGTCAAGCATTTCAGCTCCTATGGCTTTGGTGAAGCTGAGATCGACTCTTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037052