BGIOSGA037053

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Revision as of 08:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037053| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037053, complete gene.| tag = OS12G01...")
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Gene Name

BGIOSGA037053

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037053, complete gene.

LocusTag

OS12G0166000

Ensembl Transcript ID

BGIOSGA037053-TA

Ensembl Protein ID

BGIOSGA037053-PA

Length

5817

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3662055..3667871

Sequence Coding Region

3662055..3662073,3662452..3662859,3663856..3664326,3664587..3664802,3665082..3665632
,3665796..3665859,3665959..3666019,3666315..3666453,3666605..3666721
,3666837..3667014,3667261..3667871

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3662055..3667871 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3662055..3667871 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCGGCTCCAGCAACCCATTTGGGCAGTCGTCCACTAGCCCTTTCGGCCAGACCTCAAGCAACCCTTTTGGGGCCCAGACAGGATTTGGCCAGGCCAGCACCTCCACCTCCAATCCGTTCGCGCCGAAACCATTTGGCAGCCCGACCACCACGTTTGGGGCACAGACAGGAGGCTCACCTTTTGGCACGACGTCCACGGGGGCCTTTAGCCAGCCGTCCACTCCAGCGTTTGGCTCCACGTCCACAGGTGCCTTTGGCCAGCCATCCACCCCGGCGTTTGGCGCGACGTCCGCTGGGGCCTTCGGCCAGCCATCCACTCCGGCGTTTGGCACTCCATCATCCTCTCCATTTGGGAGCTCTGCGCCAGCTTTTGGTGCATCACCAGCCCCTGCATTTGGCGCCACATCGTCCACCTTTGGCAGCGGATCATCATTGTTTGGACAAAAGCCAAGCTTTGGTGGTTTTGGTTCCTCTCCTAGCCAATCCAATGCTTTTGGAGGCACATTCCAGCAAACACAACCAGCATTTGGTAGCAGCACTTTTGGTGCATCAAGCACGCCGGCCTTTGGTGCCACAACTACACCAGCATTTGGTGCCACAACTACACCAGCATTTGGCACCACCACCCCAGCATTTGGTTCAACATCGCCATCATTATTCGGTGCTACCAGTGCCCCAGCATTTGGTTCTAGTGGCTTTGGATCTTCAGGTACCCCAGCCTTCGGTGCAAGTAGCACTCCAGGATTTGGAGCTTCAAGCTCAGCTTCATTTGGCACATCAACGAGTGCTTTTAGCTTTGGCTCTTCACCATCTTTTGGTCAAACAGCATCTACATTTGGTAGCACTCCTTTTGGAACATCTACATCTCCTTTTGGTGCACAGACTTCTCCATTTGGCTCACAGACAGCAGCACCGACATTTGGGCAAACATCATTTGGGAACCAAGCAGGAGGAACCAGAATTCAACCCTATACTCAAACTCCAGACGCGGATAGTGCTACAAGTGGTGCTCAGCCCACTGCAAAGTTGGATTCTATATCAGCCATGGAGGCATACAAAGCGAAGAGTCATGAAGAGTTGAGGTGGGAGGATTACCAACGTGGAGACAAAGGTGGACCTAATCCTTCAGGAACTCCAGCAGCAACCCCTAGCTTCCCATCCCCACTGAACAATCAATTTCCCCAGAACCCTTCAAATGCATTCCAAACTTCAAATGCATTCCAAACGACATCCGTTAGCAATCCATTTGCTGCCAAGCCTTCCACTGGTTTCGGTTCTACTTCCACAACATTGTTCAATTCACCATTCAATAATACATCAGCAGCAAGCTCAAGTCCATTTGCATCAACTACAAGTAGCCCATTATTTACACAAACAAGCAGTTCTCTGTTTGCAAATTCTACTCCTGGTTTTGCTTCTTCTTCTCCGTTTGGCGCATCATTATCAAACCCCAGTTCATTCAGTACTGGCTTGTCCTTGGTTAACACTCAATCAGCTGGGCTATTTAGTTCTTCCCCGGCGTTTGCGCAACAGCCATTTACCCAGGCATCATCAGGGTTCGGATTGAGCACTCCAGCTTTCTCTACTGGAAGCCTATTCAGCACACCTACCCCTGGAATGACTGGTGGACTGTTTGGCAGCATGTCTTCACCCTTTTCATCAACGGCGTTTCAACAATCTGCCCCTACTCCAAGCATGTTCTCCTTCCAACCTCAAACTCAAACAGCTCCTACTGGTGGATTTCCTGGCATTTCCAACACTATGAATCAGGCACCTTTTGGACAGCCAACTCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTACAAATCCCTTCGGTACTCTGCCAGCAATGCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCTGTTCAATATGGAATCTCAAGTTTGCCAGTTGCTGATAAGCCTCTTACGAACAGAACATCATTATCCATGGTGGTTCCTAGGCATTTGTCGCAGAGAAGGATAAAAGTGCTGCCCAGAAAATATAATCCGATATCTGATGGCAAGGTCCCATTCTTTGCTGATGACGAAGAATCTCCTGCAACACCAAAAGCTGATGCGTTTTTCATTCCTAGAGAGAACCCGAGGAATCTTATAATCCGTCCAATTGATCAGTGGCCTTCACGTGGCACTGTTGACAGGCAGCCAATTCCAAAGAATTTAGTTGATACAGATAAACATAAAGGCCCTCTGGCTATTTCACCAACCAGGTCTACTTCAATCGAAAATGGCATCCAGCGTGATGACCGTGCATCAAATGAGCCTGATACTGTGACAAGGCATGGGAATGGTACTTCTGTTGAGAGGCTTGTGCCTAAGCTAGTGCATGCCGATTATTATACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGTGCTGAACCAGGCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATGATTACGGTAGCATCAAGTTTATTGGAGAAACGGACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAATTCAATAACCGTGAAGTGATCGTCTACAAGGACGATAGCAAGAAGCCCCCTGTCGGTGAGGGTCTGAATAAAGCTGCCGTGGTGACCCTTCTCAATATCAAGTGCATGAACAAGAAGACGGGGGATCAGTACACAGAGGGTCCGAGGGTGGACAAGTACAAGGAGATGCTGGTGAAGAAAGCTGAGGAGCAGGGTGCTGAGTTCATCTCTTTCGATGCCGTCAATGGCGAGTGGAAATTCAGGGTCAAGCATTTCAGCTCCTATGGCTTTGGTGAAGCTGAAATCGTCTCTTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MFGSSNPFGQSSTSPFGQTSSNPFGAQTGFGQASTSTSNPFAPKPFGSPTTTFGAQTGGSPFGTTSTGAFSQPSTPAFGSTSTGAFGQPSTPAFGATSAGAFGQPSTPAFGTPSSSPFGSSAPAFGASPAPAFGATSSTFGSGSSLFGQKPSFGGFGSSPSQSNAFGGTFQQTQPAFGSSTFGASSTPAFGATTTPAFGATTTPAFGTTTPAFGSTSPSLFGATSAPAFGSSGFGSSGTPAFGASSTPGFGASSSASFGTSTSAFSFGSSPSFGQTASTFGSTPFGTSTSPFGAQTSPFGSQTAAPTFGQTSFGNQAGGTRIQPYTQTPDADSATSGAQPTAKLDSISAMEAYKAKSHEELRWEDYQRGDKGGPNPSGTPAATPSFPSPLNNQFPQNPSNAFQTSNAFQTTSVSNPFAAKPSTGFGSTSTTLFNSPFNNTSAASSSPFASTTSSPLFTQTSSSLFANSTPGFASSSPFGASLSNPSSFSTGLSLVNTQSAGLFSSSPAFAQQPFTQASSGFGLSTPAFSTGSLFSTPTPGMTGGLFGSMSSPFSSTAFQQSAPTPSMFSFQPQTQTAPTGGFPGISNTMNQAPFGQPTPSQSNMVMQPALVTNPFGTLPAMPQMSIGNGGSAPSVQYGISSLPVADKPLTNRTSLSMVVPRHLSQRRIKVLPRKYNPISDGKVPFFADDEESPATPKADAFFIPRENPRNLIIRPIDQWPSRGTVDRQPIPKNLVDTDKHKGPLAISPTRSTSIENGIQRDDRASNEPDTVTRHGNGTSVERLVPKLVHADYYTEPSLEELAAKERAEPGYCSRVRDFAVGRHDYGSIKFIGETDVRGLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKAAVVTLLNIKCMNKKTGDQYTEGPRVDKYKEMLVKKAEEQGAEFISFDAVNGEWKFRVKHFSSYGFGEAEIVSC</aaseq>

Gene Sequence

<dnaseqindica>1..19#398..805#1802..2272#2533..2748#3028..3578#3742..3805#3905..3965#4261..4399#4551..4667#4783..4960#5207..5817#ATGTTCGGCTCCAGCAACCGTAAGCGCCTCCCTCACCCCGGATTCTCTCCCCCCGCCGCATCCACCACTTGTTCGGCCGTGCCCTAGCTAGGGTTTTCTCGCTCCTCACTGCTCCGCGCCTCATGTTAGTATCGGCGTTGTTATTTCTGCTAATACTGCTCCACAGATCTCTACGATGATCCGCGCCGCATGCCGAATCGTAGTGTTGATGGCACGGGATGTCTTGTTCCACTGTTAATGGCATTGTGGATCATGTTTTCGGCGAATCGATATCCCGCGATGTGTCGCGTGCTAATTGTTTTCATTCTTGCAATGCTACAAGTGTATATGGACATCTGCTATATAGATAGCATATTGATATATGATTAATGTGATATGATATGTTTGTTCCTCGCAGCATTTGGGCAGTCGTCCACTAGCCCTTTCGGCCAGACCTCAAGCAACCCTTTTGGGGCCCAGACAGGATTTGGCCAGGCCAGCACCTCCACCTCCAATCCGTTCGCGCCGAAACCATTTGGCAGCCCGACCACCACGTTTGGGGCACAGACAGGAGGCTCACCTTTTGGCACGACGTCCACGGGGGCCTTTAGCCAGCCGTCCACTCCAGCGTTTGGCTCCACGTCCACAGGTGCCTTTGGCCAGCCATCCACCCCGGCGTTTGGCGCGACGTCCGCTGGGGCCTTCGGCCAGCCATCCACTCCGGCGTTTGGCACTCCATCATCCTCTCCATTTGGGAGCTCTGCGCCAGCTTTTGGTGCATCACCAGCCCCTGCATTTGGCGCCACATCGTCCACCTTTGGCAGCGGTTTGTACTTCTGGCATTCATTTTCTTTCCACATTATCATTTTCTTCAACTTAGAACTAAGCACTGTTCACTTTTATCGGACATCCACTGGTTGCACATATTTTCTCAGCATTTCATTCGTAGCATAGTAAAACTGTCTGTAAAGCTGTCCTGGCTCTATTCAATATACAGTACTTCCTCCGTTTCATATTATAAGACTTTCATGTGGGCAATGCTAGAAAGTCTTATAATATGAAACGGAGGGAGTAGTTTCTAGCTTGATGGGCATTTCCTTTTCTGTTACGTGCGATTATTGAATCCTGTTTCTATAAATTGATTCTCCCACGATTGTTTATGCAGAAAAAATGCAATGCTAGAAAATATGTTCTTATTTGATTTGATTTTTTACTGCCGCTGCTGGTTGCCTATGTTTGCTGAAAAGTCTAGAATAGAGTTGGTATATACTGTCGAGTGCAATCTCCAATTGTGTATCTAGGACAATAGTTTGAAGCTGAATTTGCAATCTATATTGACTATTTTCAGTTTTTTTTGGTTGTTTGAAGTTCGTGATAGATGACATGACAGTGTTTCTTTGAATCAAAACTAGCGAGAAAAAAAAGTGAGAATCTTGAGAGTACTAGTTCATTTGCCTTAAATTGTCACATACCATCCACTCCCTTTTTGTGAAAGCATAAAATAGCACTAGACTTGATATGTGTGTGCCTGCTGCATCATAGTTAAGAATGGTAAACTTGCTTAATGAAAGTACAAAGGCTGACATGAGTATCTTGTAGGTTCTCTCTTAGTAGTAAGCTCCACTGAGTATTTCGATTAACCATGGTTATATACCAGAACATTGAATCATGGCGTGTTATGATTTCTACATTTGTTATACAGATGCTCAATTGAATTTTCCTGAATAGTGGGCTAGTGGCAGCCCACAATGTTGTTGTTTTAATTGCTCTTCAGAGCTATCATTTTGTATGACATGTGACACAACAATCCGCAAATTTGCAGGATCATCATTGTTTGGACAAAAGCCAAGCTTTGGTGGTTTTGGTTCCTCTCCTAGCCAATCCAATGCTTTTGGAGGCACATTCCAGCAAACACAACCAGCATTTGGTAGCAGCACTTTTGGTGCATCAAGCACGCCGGCCTTTGGTGCCACAACTACACCAGCATTTGGTGCCACAACTACACCAGCATTTGGCACCACCACCCCAGCATTTGGTTCAACATCGCCATCATTATTCGGTGCTACCAGTGCCCCAGCATTTGGTTCTAGTGGCTTTGGATCTTCAGGTACCCCAGCCTTCGGTGCAAGTAGCACTCCAGGATTTGGAGCTTCAAGCTCAGCTTCATTTGGCACATCAACGAGTGCTTTTAGCTTTGGCTCTTCACCATCTTTTGGTCAAACAGCATCTACATTTGGTAGCACTCCTTTTGGAACATCTACATCTCCTTTTGGTGCACAGACTTCTCCATTTGGTAAGTTTTCATTTTGTTTCTCACTCAGTTATGTTTCACAAGTTGGGTTGCTTAGTTGTGACACACCATGTTAATAGTCTTCCCCTGACATTCTATAACTGCTTTATGTCAGGTTCTTTTGTTATGACTCTATGTCTTGCATCTGTGAACCTTTTCTTTCCCTTCTTTCCCGCTGATAGCTTAGTCCCTTTTTTTTTATCATGGCAATCGCATGTTTCATCCATTCCATCTTGAATGTGTCTTTTTGGGGGGAGTTTCAGGCTCACAGACAGCAGCACCGACATTTGGGCAAACATCATTTGGGAACCAAGCAGGAGGAACCAGAATTCAACCCTATACTCAAACTCCAGACGCGGATAGTGCTACAAGTGGTGCTCAGCCCACTGCAAAGTTGGATTCTATATCAGCCATGGAGGCATACAAAGCGAAGAGTCATGAAGAGTTGAGGTGGGAGGATTACCAACGTGGAGACAAAGGTGAGGCATTTTTGGGAGTGAGTTGATTGCTTCATTTACTAACAATCTCTTGAACCATTATAGTTAATTGTATTTGCATGTTTAAAAGAAACGAAGTAATTATCATGTACTAGCTTCTGCTACAGTGTAAAGTGTTTTTTGTTGATTAGAATGATAAAATCTAGTGATAAAACAAGGTCCTTTATGCTCCTGTAGCTCATTCTGCATTATTATATGCTTGGTTCCATGTGCCTTTTTTCTTTATCACTTTTGAGTAACTCTTGATTTTTGAACCTTCAGGTGGACCTAATCCTTCAGGAACTCCAGCAGCAACCCCTAGCTTCCCATCCCCACTGAACAATCAATTTCCCCAGAACCCTTCAAATGCATTCCAAACTTCAAATGCATTCCAAACGACATCCGTTAGCAATCCATTTGCTGCCAAGCCTTCCACTGGTTTCGGTTCTACTTCCACAACATTGTTCAATTCACCATTCAATAATACATCAGCAGCAAGCTCAAGTCCATTTGCATCAACTACAAGTAGCCCATTATTTACACAAACAAGCAGTTCTCTGTTTGCAAATTCTACTCCTGGTTTTGCTTCTTCTTCTCCGTTTGGCGCATCATTATCAAACCCCAGTTCATTCAGTACTGGCTTGTCCTTGGTTAACACTCAATCAGCTGGGCTATTTAGTTCTTCCCCGGCGTTTGCGCAACAGCCATTTACCCAGGCATCATCAGGGTTCGGATTGAGCACTCCAGCTTTCTCTACTGGAAGCCTATTCAGCACACCTACCCCTGGAATGACTGGTGGACTGTTTGGCAGCATGTCTTCACCCTTTTCATCAGTAAGCATCCGTCTTCTAGTTATTTTCATATTTAGGTTGGATTGATTTTCCTTATAACACTGATACATCTATGATCTATCTTATTCTCTTCTCATGTACTCCTTATATTTACTTGTTAAAAGTATCACTGCTAACAACATTGACTTTGCTCCTTCTGATTCAGACGGCGTTTCAACAATCTGCCCCTACTCCAAGCATGTTCTCCTTCCAACCTCAAACTCAAACAGGTTTGTGTTTTGTCTCCTAATCAATCTCAGATTCTTTTACTTGGTTAAGCAAAATTGGGTTAACTTACTTTTGTGCTTGTGCATGCATGGTTACTGCAGCTCCTACTGGTGGATTTCCTGGCATTTCCAACACTATGAATCAGGCACCTTTTGGACAGCCGTATGATATCTTTCATTTACTTTTTGAATGCAAATAATTGTTCATTTCCTTTTTTATCTATTTCATTTTAGGTGGGGCCACTGGTTTGCTTAGTATGCACTATGTTGAAGTTAAACTACAGTTTGATAGTTCATACTGATATTTAATGCCGAGATTAATAGAACAAGGTTTTGAAAAGTATCACAATTTAGTTGCCTTTACAAATGAGTTCTGGGCAAGCCTATTATGTGGGACCCATTCTTATGACAGGCTAACATCCTCTAATTTGTAACTTCCTATTTCATATTGAATGCAGAACTCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTACAAATCCCTTCGGTACTCTGCCAGCAATGCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCTGTTCAATATGGAATCTCAAGTTTGCCAGTTAGTATTATTACTGTCTTAACTATTTTGATTGTTAAAGTAGAGTGCATGAGCACCTGAGCTTACTATAGAAGGATTGTTAGCAAGTTTGTCTGCTGATTGAGATACAAGAAAAGTGCATAGCAGATTGAGACATTCTACTCTTTTGCAGGTTGCTGATAAGCCTCTTACGAACAGAACATCATTATCCATGGTGGTTCCTAGGCATTTGTCGCAGAGAAGGATAAAAGTGCTGCCCAGAAAATATAATCCGATATCTGATGGCAAGGTATACTTGCAAGTTTGTATCACAATATGTTTTATGATTTTTGTTGTTTGGGGTGTTCTGCAAGCATTAAGAAAAAACACATTAAACATGATGATCATCTTTTTTATTCCTTTAGGTCCCATTCTTTGCTGATGACGAAGAATCTCCTGCAACACCAAAAGCTGATGCGTTTTTCATTCCTAGAGAGAACCCGAGGAATCTTATAATCCGTCCAATTGATCAGTGGCCTTCACGTGGCACTGTTGACAGGCAGCCAATTCCAAAGAATTTAGTTGATACAGATAAACATAAAGGTATTTCTTGTTAGTGCAGTACTGAAGCCTACCTTGTGGACATGCAGTTTTATAGCATTAAAGATTTATATCATACCCCATTCTGTCTCCCTTCTATGACGGCTTTTGCAGCATTGTAAATCATCATTTAGAATCATTTGTTTCGTTCATTTTGCCTCGACTACCAGCCTACCATGGCATACTTAACTGTTTTACCATGAACCTTAATGTGCAATTATCAGTTTCTAATTTAACGATGTTTTGCAGGCCCTCTGGCTATTTCACCAACCAGGTCTACTTCAATCGAAAATGGCATCCAGCGTGATGACCGTGCATCAAATGAGCCTGATACTGTGACAAGGCATGGGAATGGTACTTCTGTTGAGAGGCTTGTGCCTAAGCTAGTGCATGCCGATTATTATACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGTGCTGAACCAGGCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATGATTACGGTAGCATCAAGTTTATTGGAGAAACGGACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAATTCAATAACCGTGAAGTGATCGTCTACAAGGACGATAGCAAGAAGCCCCCTGTCGGTGAGGGTCTGAATAAAGCTGCCGTGGTGACCCTTCTCAATATCAAGTGCATGAACAAGAAGACGGGGGATCAGTACACAGAGGGTCCGAGGGTGGACAAGTACAAGGAGATGCTGGTGAAGAAAGCTGAGGAGCAGGGTGCTGAGTTCATCTCTTTCGATGCCGTCAATGGCGAGTGGAAATTCAGGGTCAAGCATTTCAGCTCCTATGGCTTTGGTGAAGCTGAAATCGTCTCTTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037053