Os12g0193800

From RiceWiki
Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0193800| Description = Conserved hypothetical protein| Version = NM_001189901.1 GI:297728932 GeneID:9266606| Length = 3476 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0193800

Description

Conserved hypothetical protein

Version

NM_001189901.1 GI:297728932 GeneID:9266606

Length

3476 bp

Definition

Oryza sativa Japonica Group Os12g0193800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4795534..4799009

Sequence Coding Region

4796144..4797520,4797619..4797871,4798033..4798156,4798586..4798625

Expression

GEO Profiles:Os12g0193800

Genome Context

<gbrowseImage1> name=NC_008405:4795534..4799009 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4795534..4799009 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttccgctacctcacggacagccaggccaggcattacctctacctcgcctcctacgaccttctcctcgccatcgagctcgtccaccatgaccgccgccgctgtcttccccgaccatccttgcttcccgacgatggcaggatgaagatcgcactcaggatcgccgccgtccaagcagaccaccccgcgccggataaactggtgcagaccatgacagcgcagtacccgtctcatttgctctctcctatcatggacaagctgcggggatcggagctgctcaccacccatgacgtccgggccatcatggacctacttcttgcacgccagtgcctgcctgccaacatggacttcttgtgctgcccaaatggcgatgcttgtgctcatcgagccaccaaccatggcaccctgcaggttgccacctgcattgggggaggtgcttttgctcgaatctcgaccgaaatcgtaaccccagatcacatccgacctcagcaactccaatacatctccaacctgacatttgatgatagctcagccatggagatgaagctttccaagtgcagtagtggtggttgtcaactggactatgatttttcctcgccatgcgagtacatactgtccctgaaaatgtgcctccttgatgccatccatggcttctacatccgggcactcgccgtgctgcccacgggtgacgactccatgcgccttggccgccttctccgtgccctccttgtgtccggacactgctatggccccttggatcctgtgtcaaacataatcctgaatgctgtcttgtatgatgccgcataccctccgcaaccacacgaaggtgatggcaaggctgagttaccacatgatatctttgacacccgcgccatgcgggacatggcgtcctgttccctcgatggcctcgttgccctcctctgcaccatcaccaccaccaccactggcaccccgctctcaaagcatgaggctgtggagtacctttggtcctggcagtgtgacctcaccgagaagctgcagcagaccgtgatggcaaagaacccctacgccgctgcagccatggcttccaagcacccacagcacaccatgctcggcgcgctgctcgtgtccttctccagcgagaagctcgaccgcctgcgctactttctgagatccattagtgatggctctgggtgtgttatctccggtgatgattgggagcagctaaacaaaatgatcaaaacacagctaaccacaattatcacgacaagagaagtgctaccattcaatccacaagccttgtcagcatcattgagagtgtcagcctatgtgaactcgcatagttttgctcgcagcaagctggaagagttgctactgagatattctaggcaacatccctgggaaccaaggtataagcttgatctcatctgcggagtagaggaacccagatcagcccgatgtggatgctaccatgctaacttcttggcaagcgcccatggcagtgtgctcaagttcaatggtgagacaaccgtagcacaaaccactgtgcgcagactcttcttcgctgaattctgggactcacaacctggtcgattttatgaatcacatgcaaaacccatgtgctgccctgttcaagatagtagcccttgttttggtcgttgtatcttctgtggtgaagcaagcacgattgtgcatccaccatgtgcagctagaagtcatcttgatgatgatgattatgcccccatccttgactatgatgtccaggccgccattcgtatgtggtttccaaaagccaaatcaggtaagaggaagaactaa</cdnaseq>

Protein Sequence

<aaseq>FRYLTDSQARHYLYLASYDLLLAIELVHHDRRRCLPRPSLLPDD GRMKIALRIAAVQADHPAPDKLVQTMTAQYPSHLLSPIMDKLRGSELLTTHDVRAIMD LLLARQCLPANMDFLCCPNGDACAHRATNHGTLQVATCIGGGAFARISTEIVTPDHIR PQQLQYISNLTFDDSSAMEMKLSKCSSGGCQLDYDFSSPCEYILSLKMCLLDAIHGFY IRALAVLPTGDDSMRLGRLLRALLVSGHCYGPLDPVSNIILNAVLYDAAYPPQPHEGD GKAELPHDIFDTRAMRDMASCSLDGLVALLCTITTTTTGTPLSKHEAVEYLWSWQCDL TEKLQQTVMAKNPYAAAAMASKHPQHTMLGALLVSFSSEKLDRLRYFLRSISDGSGCV ISGDDWEQLNKMIKTQLTTIITTREVLPFNPQALSASLRVSAYVNSHSFARSKLEELL LRYSRQHPWEPRYKLDLICGVEEPRSARCGCYHANFLASAHGSVLKFNGETTVAQTTV RRLFFAEFWDSQPGRFYESHAKPMCCPVQDSSPCFGRCIFCGEASTIVHPPCAARSHL DDDDYAPILDYDVQAAIRMWFPKAKSGKRKN</aaseq>

Gene Sequence

<dnaseqindica>611..1987#2086..2338#2500..2623#3053..3092#gaatgccaccaaaatcgaatcgctacaaaccctatccactgccgctggactcgtcgccgtgattcacctcgtgccgccgctcgcgcagcgccgccccgccccgccccgccccgccccggcgtagtaggagatgaagcggcgaaaaatcgccaaatcgacagcaagccgggggagcaggtccggtgtgaaatccccaaatccacggagcagagcagcgaatccgagccggaccggcggcttcttttctgatgaactccgattgggcagatggacttgttaccacggggaggaggaggaggagaagccatggctgccaccggccgacaaatcatccgagtccataagggagtacgtcgccgaggcggcgcgccggctacccctcgaggagatgccggagctcctccactgcgtcggcgcggtcggatactgctttggcctcgccgaccccgtcaccaacatcatcctcaacgccgtcgcccacctcgccgccggcggagcggaggacctgccgccgccgcccaagaagaggacacgcaggacgtacagccgtggctgggggtacatctcattgaactccttctgtggcctcctcgcgttcatgaaggtgtaattccgctacctcacggacagccaggccaggcattacctctacctcgcctcctacgaccttctcctcgccatcgagctcgtccaccatgaccgccgccgctgtcttccccgaccatccttgcttcccgacgatggcaggatgaagatcgcactcaggatcgccgccgtccaagcagaccaccccgcgccggataaactggtgcagaccatgacagcgcagtacccgtctcatttgctctctcctatcatggacaagctgcggggatcggagctgctcaccacccatgacgtccgggccatcatggacctacttcttgcacgccagtgcctgcctgccaacatggacttcttgtgctgcccaaatggcgatgcttgtgctcatcgagccaccaaccatggcaccctgcaggttgccacctgcattgggggaggtgcttttgctcgaatctcgaccgaaatcgtaaccccagatcacatccgacctcagcaactccaatacatctccaacctgacatttgatgatagctcagccatggagatgaagctttccaagtgcagtagtggtggttgtcaactggactatgatttttcctcgccatgcgagtacatactgtccctgaaaatgtgcctccttgatgccatccatggcttctacatccgggcactcgccgtgctgcccacgggtgacgactccatgcgccttggccgccttctccgtgccctccttgtgtccggacactgctatggccccttggatcctgtgtcaaacataatcctgaatgctgtcttgtatgatgccgcataccctccgcaaccacacgaaggtgatggcaaggctgagttaccacatgatatctttgacacccgcgccatgcgggacatggcgtcctgttccctcgatggcctcgttgccctcctctgcaccatcaccaccaccaccactggcaccccgctctcaaagcatgaggctgtggagtacctttggtcctggcagtgtgacctcaccgagaagctgcagcagaccgtgatggcaaagaacccctacgccgctgcagccatggcttccaagcacccacagcacaccatgctcggcgcgctgctcgtgtccttctccagcgagaagctcgaccgcctgcgctactttctgagatccattagtgatggctctgggtgtgttatctccggtgatgattgggagcagctaaacaaaatgatcaaaacacagctaaccacaattatcacgacaagagaagtgctaccattcaatccacaagccttgtcagcatcattgagagtgtcagcctatgtgaactcgcatagttttgctcgcagcaagctggaagagttgctactgagatattctaggcaacatccctgggtaaattcagagtagaaacttattttgattgattgttggacctgcttctcttcaagtgtgctaaaattccatccaccctcttgtgtttgttattgcaggaaccaaggtataagcttgatctcatctgcggagtagaggaacccagatcagcccgatgtggatgctaccatgctaacttcttggcaagcgcccatggcagtgtgctcaagttcaatggtgagacaaccgtagcacaaaccactgtgcgcagactcttcttcgctgaattctgggactcacaacctggtcgattttatgaatcacatgcaaaacccatgtgctgccctgttcaagatagtagcccttgttttggtgagtcactgaacccttgttgtgatgttcctactcattttatttccgtcaagtagtagacacactgtggcatgtgattgcaattttcatgcatgttaatgccctggattggtgtaatatatttattgttttgccttatgtcttggctttgttgtgaacaggtcgttgtatcttctgtggtgaagcaagcacgattgtgcatccaccatgtgcagctagaagtcatcttgatgatgatgattatgcccccatccttgactatgatgtccaggccgccattcgtatgtatgtttctgtttcacctatttgtatctatggttctgttatccaagcttagcaaaaacggggcctgttaagagtccaacatcacttattgatcatgaaaggggatcaaaacagaaacaagggcttgtttttgtttcacccattcgtatctaccgttcttgtcaaacttaaaaaaaatttgttttggacaaagagtttaaagaaaaaatcacaatcaactaagaatccagattggaagtcacaatctgtaaataggactgtagatacaatgagtgtgttctcagggatgtggggattattaatgaaacaccaatgaacatgggagattgtttgaggaaaagaggtgtgataaataccgggttatggctttgtggctgacgaggaatgatttagtattttgataatgtgttggtgtcatctccattgcaggtggtttccaaaagccaaatcaggtaagaggaagaactaaggaaaaggctaaaggaagctggtagtgtggatgatatacctgatgctatatagttatataggggtcgacctatgttttgtttcagaagtttggttagatggagtccgcttagatggttttgaaacttatgaactcttttgaggtgtaatcaggggatgttgctaacttgggggaagctggcttatgagtctcttaggctttctcaacttgttgtcaattatgttggaattcaggtggatgatatacctgatgctatatagttatataggggtcgacctgtattttgtttcagaagttcggttagatgaagtcttcttagatggttttgaacttatgaactcttttaaggtctaatcaggggacgttgctaacttttggggaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0193800, RefSeq:Os12g0193800