BGIOSGA037089

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Revision as of 08:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037089| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037089, complete gene.| tag = OSRFC2|...")
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Gene Name

BGIOSGA037089

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037089, complete gene.

LocusTag

OSRFC2

Ensembl Transcript ID

BGIOSGA037089-TA

Ensembl Protein ID

BGIOSGA037089-PA

Length

3605

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4183098..4186702

Sequence Coding Region

4183098..4183141,4183265..4183343,4183450..4183529,4184580..4184699,4184782..4184851
,4184930..4185003,4185085..4185205,4185293..4185355,4185441..4185500
,4185849..4185974,4186051..4186134,4186604..4186702

Genome Context

<gbrowseImage1> name=IndicaChromosome12:4183098..4186702 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:4183098..4186702 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATGCTGTTCTACGGCCCGCCTGGCACCGGGAAGACCACCACCGCGCTTGCAATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARICKKLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF</aaseq>

Gene Sequence

<dnaseqindica>1..44#168..246#353..432#1483..1602#1685..1754#1833..1906#1988..2108#2196..2258#2344..2403#2752..2877#2954..3037#3507..3605#ATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATAGTAAGCGCCGCCCTCTCTTCCCCTCCCCCACACCATTTTCCTCCCTCAATTTGTCCATAAGCCCTCATGGATTGCCCTAGTTGCGACTGACTGACCCGCTGCTCATCCTCCTCCCGTTCGCAGCCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACGTGAGCCCCCACAGCCGCCGCGGGCTAAACCCTAGCTCTGTTTCTTTTTTTTTTCCTCTTGTGACCCCCTGGGAGGTTTCTGATTTGTGATCTGGTCCCTTTGCAGCTTCCGCACATGCTGTTCTACGGCCCGCCTGGCACCGGGAAGACCACCACCGCGCTTGCAATTGCTTACCAGCTCTACGGGTAACTCAATTCTTACTGGCAACTGATTACTTGATTTTTTTTCTCTTTATGAGAATCTTGTTTTGGTTCGGTTGAAATTGGCTTATCTTAGTAATCTTGGAAGAGGTGGTAATTCTCAATGCAATGGGAGCATTAGATAGGCTGCGCTGGGGGTGAATCACTTAACTTTTGAGACATTAGAATTGATAACCTTAATTTGGAGTATGTAATACTGCGGAAATGCCAAAAAAAGGGGATCAAATGCCAGAAATTGGCAAGGATATGAAGCTTCTGCACAAAGTTCGACCTTCATTATCTTGGGTATTTTGTTTATTTTGGCAAATATTGGTATACATCTTTGTAGGCAGGCGTTCCAAAAGTGGGTACAATTAGTTTGATGACATGGTTGATCCTAGTCCTGCATATTACAATACTAATCGGACCACTGGATCAATGTGTTTGAATGATGTATGGTGAAATGGTAGTTCAAGTTTAAAATTTGGATTGTTGAAATGTTGAGATCTGTTATAATTTTGTTCACTCGTCAGCCATTTTCATTGTTTCTGGGCTAGGTAATTTATTCTTGCATCTCTCACAGGCCCCTTTTTTCTTGTTGAGTTGTTACCACATCACTTGCTTGATTAGAATCTATTCGATGTGTGTAATGGTTCATGTCTTACCAATGATAATTGGAGGCGGTCAGATGTATGGAGGGAAATCTAGAGAATCAAAATTTTCATGTGGAATAGCACATATGAATTAAGGGAAAAAATAATACTGAAACAGTTTGTTAGGAGGAAATTTGATTAGATTGAGTAGTAGCGAAGTTTATTCTCTTTTTTTTTCAACTGATAATGAGCACTATAGTGATTGAGATTATCTGTCTGCCAATTTTGCTCTTCTAATATGGTGGTTACTTCCTAAATTCATTTGCAAGAAAAACCCCATTCTAATCATGACTACTAAATAATGAAATAACATTAAGAGGATATGTTTTCTGCAAATAGTGCAAGGTTGTTCTCAGTAAGTTTGGGACTCATGATAGTTTTTTCGTACTATTTGGATGTGCAGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGGTAATTTAACCAAAACTAGGGACCTTTCAGTTTCCATCTGTAGTTGCATTCTTGACTAGTTTGTTTTTGCGATGGCCTTCAGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGGTATAGACAACAGGCAGAACGCTAAAAGCCTTGTTGCTGCAGAACCGTGCGTTGATGATGTCTTATATCTGTCTGTAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGTATTAGTTTGTTTCTCCTTTTTTCCCCCTGTGGATCTTTATTTGAGTTTATGTAATTCATTATCCTAATGTGTAATACAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGTAACTGTACTGCATTCACTTCAAAATCTAAATCTACATTTAAATATCCGCATTTTTGCTAACACTTCTTTTTATTTTTCATAATAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGGTATGGTTTACCTAGTTTGGCGTTTGCATTATGTGGTTTATTTATATTAATCTTAATTTAATATACCTTTTGTTTTTTGTTGCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGTACATTACCACTCATTTCTGTTCCCTTGCAAATGCCTAAACTTACATGTGTCATTTATTTTGCTATTCTATGTTTGAGTCTGTACAAAGTCACGCTTACTTGATGACATTGTTTTCCTGAAAGTAGCAAAGTGGATTTTGCACCATTTTGTTAACAAGATCCTGTGCACGTGGTGATCAAATTGTTTAATTGAGAGAAATTCGGTGTACTTGTAATCTGGAAAAACTTCTCTCATGTCATGATAAATTTTAGTGTGCAAGTAGTTTGTGATTGGTATAAGTAGTCCAGGGAACCTTATTTTATGGGAGGTTAAATTATTTTGCTCATCTTGTTTGTCCATGTGTCAGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGGTCATCTCTATTTAATTTAAATCTAGATATGTGCTGTTTTCACCTTGTCATTTGCTAACCTAACTACTCCGTGCAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGGTTTGTCCTACTGGGTTTCTCTTCTGTTTTTGTTATTCTTTCCTACTCCCTTCGCCTCCTTATGAAAGTGGTTTATGTGGACAACTATATATGACAAACATAGAAATAAATCTTGCTTTGGGACCGAGGGAGTAGATGCTTGTTCCACTATATCTATAGATTTACTTTACCGAACAAGTCTTTGTAAGATCCTTCTTGTCATCATGAGGTGAATGTTTGTGACTAAAAACTTAGAAGGCAACATTGTATACAATGTACCATAGATGATTGTAATGAAGGATTGAATTTTCTGTTTCTATGTTTGTCATATATTCCACATACTGAAGTTCAAATAAAATGCTAACTTATATGTGGAACAGTTCCAGCAATTTTATGTGTACATCATTAAAAGCATACACTTAATATGATAGCTCTGAAGTATTGTTGCTCCATCCCATTTTTCTCATTCCATTTCTTTTGGAATATGTAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037089