BGIOSGA037090

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Revision as of 08:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037090| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037090, complete gene.| tag = OsI_376...")
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Gene Name

BGIOSGA037090

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037090, complete gene.

LocusTag

OsI_37666

Ensembl Transcript ID

BGIOSGA037090-TA

Ensembl Protein ID

BGIOSGA037090-PA

Length

5213

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4189450..4194662

Sequence Coding Region

4189450..4189825,4189930..4190489,4191372..4191677,4191783..4191914,4192335..4192468
,4192651..4192703,4192796..4192938,4194078..4194662

Genome Context

<gbrowseImage1> name=IndicaChromosome12:4189450..4194662 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:4189450..4194662 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGACCCCGTGGTGGACCTCCGCGAGGCCGAGGTGCACCCCACGGGCGATCGAGCGCGTCTCCGCCTTCCCGCCCGCGTTCCGCCGCGTGGTCAACCGGCTCCACCCCTCCGTGCTCGCCGTCATGGCGGCGGAGCGCGCCGCCGCCGCGGCTGGTGCTGGTGCTGGCGGCGGCGGCGCGGCCGTCCCCGCGCTCGAGAACATCTCTCACGGGCAGCTCCAGGTGCTCTCGTCCGTGCTCCCTGACCACCCGTCCTTGTCCAACGACCCCGACAAGCCGTCCTCCTACGTCTGCACCCCTCCTCTACTCATGGAGTGCCGCGGCGTGGCCAAGCAGTTCGATGGCAAATTGCTCATGGTACCCAAGCATTCAGATTGGTTCTCGCCAATGACGGTGCACAGGTTGGAGAGGCAAGTGCTGCCGCAGTTCTTCTCAGGGAAGTCCCCGGGGCACACGCCAGGGAAATACATTATGTTGAGGAATAGGGTAATTACAACGTATCTGGAGCGTCCTGCGAGGAGGCTTGCATTTTCTGAGTGCCAAGGGCTTGTCACAAGCACGCCTGAATTGTATGACCTGAGTAGAATTGTTAGGTTTTTGGACGCTTGGGGGATTATTAATTACCTTGCGGCTGGGTCTGTTCAACGGGGCTTGAGGATGGCAGCAACACTAATCAGAGAGGAGCCAACAGGGGAGCTGCATCTCATGTCTGCTCCATTGAAATCAATTGATGGTTTAATTTTGTTTGATCGACCAAAATGCAGTGTCCGGGCAGAGGATATTGCTTCTGGGGCATCAATTTCATCTTCTCCAGGGATGGAAAATGGTGATGCTGGTTTTGATGAGAAGACATTGTTGGAGAGATTGTCTGAGAGCTTTTGTAGTTTCTGCGCACAACCTTTGCCTAGCTTGCACTACGAGTCACAAAAGGAGGCAGACATTGCTCTTTGCTCGGATTGCTTCCACGATGCAAGATTTGTTACTGGGCACTCAAGCTTAGATTTTCAGAGAGTGGATGGGAAGAAAGATGGACTGGGCAATGATGGGGACAGCTGGACTGATCAGGAAACATTTCTGTTATTGGAGGGCATAGACAAATACAAAGAAAACTGGAATGCTGTTGCGGAGCATGTTGGAACAAAGTCGAAAATACAATGTCTTCACCATTTTCTTCGTCTTCCAGTAGAAGATGGATTGTTAGAGAATATTAAAGTACCAGAAGCATCCTTTTCATCGAAATTTTGGTTGATGCAAAATGCTTCTGGCTCCGTTTTTAAATTGCCACAATTGTTTGCCTTAGGAAGCTTGCCTCAAAGCGGCGAAGCTGGAGACCTTCCTTTCATTAACACTGCTAATCCTGTCATGTCACTGATCTCTATTATGTCTCTGGCCTTACTGTTCAGAGATGATTTGCAGATTGCATTTTTGGCCTCTTCATTAGGACCAAGAGTTGCGGCATCCTGTGCAAGTGAAGCATTAATTGTTTTGACTGGAGGTGACTCCAGGATCAGTTCAATTGGCAATGATGTTATGGGCCATGCTGCTCAACCGAACTGTGATTCCTCATTGGCTGTCTCTTCAGAAAATGTTAGACATGCTGCAAGATGTGGCTTGTCGGCAGCAGCAACTAAGTGTAAACTTTTTGCGGATCAGGAGGAGCGTGAAATTCAGAGATTAAGTGCTACCATCATAAATCATCAGTTGAAGAGGCTGGAGTTGAAGTTGAAGCAATTTGCAGACATCGAGACCTACCTTTTGAGGGACAGTGAGCAGTCGGAGAGGATGAGGCAGGGGCTGCAAGCTCAGCGCATCCGGATGATGTCAGGGCTTCGGTTAGCTTCACCCAGAGGCAACACTATGGCCTCAAATCCATTGAGTCAAGCGAACATTCGACCGCCAGGAATACCGGGATCGATGCCCCAGGCCGGCACTCCAGCTTTCTACTCCAATAACATGCAGGTGCACCCACAGATGGCTTTCTTGCAGCAGCAGATGCAGCAACAGCAACAAAAACAGCAGCAACAGCAGCAGATGCAGCTGCAGCAGCAACAGCAGCAGATGCAACTACAGCAGCAACAGCAGCGACAGGCCTTCTTGCAGCAGCAACAGCAGCAGATGCAACAGCAACAGCAGCAGCAGCTGCAGCAACAGCAGCAGCGGCAGCTGCAGATGCTCTCTTTCGGGGGTCGATTGCCTCTGTCAGCGATGAACGCTCCCTCAACCTCGGCAGCGCCCAATGCCATGTTCGACAACCCTGACATGCCCGGTCCATCGAATCAAGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MTTPWWTSARPRCTPRAIERVSAFPPAFRRVVNRLHPSVLAVMAAERAAAAAGAGAGGGGAAVPALENISHGQLQVLSSVLPDHPSLSNDPDKPSSYVCTPPLLMECRGVAKQFDGKLLMVPKHSDWFSPMTVHRLERQVLPQFFSGKSPGHTPGKYIMLRNRVITTYLERPARRLAFSECQGLVTSTPELYDLSRIVRFLDAWGIINYLAAGSVQRGLRMAATLIREEPTGELHLMSAPLKSIDGLILFDRPKCSVRAEDIASGASISSSPGMENGDAGFDEKTLLERLSESFCSFCAQPLPSLHYESQKEADIALCSDCFHDARFVTGHSSLDFQRVDGKKDGLGNDGDSWTDQETFLLLEGIDKYKENWNAVAEHVGTKSKIQCLHHFLRLPVEDGLLENIKVPEASFSSKFWLMQNASGSVFKLPQLFALGSLPQSGEAGDLPFINTANPVMSLISIMSLALLFRDDLQIAFLASSLGPRVAASCASEALIVLTGGDSRISSIGNDVMGHAAQPNCDSSLAVSSENVRHAARCGLSAAATKCKLFADQEEREIQRLSATIINHQLKRLELKLKQFADIETYLLRDSEQSERMRQGLQAQRIRMMSGLRLASPRGNTMASNPLSQANIRPPGIPGSMPQAGTPAFYSNNMQVHPQMAFLQQQMQQQQQKQQQQQQMQLQQQQQQMQLQQQQQRQAFLQQQQQQMQQQQQQQLQQQQQRQLQMLSFGGRLPLSAMNAPSTSAAPNAMFDNPDMPGPSNQG</aaseq>

Gene Sequence

<dnaseqindica>1..376#481..1040#1923..2228#2334..2465#2886..3019#3202..3254#3347..3489#4629..5213#ATGACGACCCCGTGGTGGACCTCCGCGAGGCCGAGGTGCACCCCACGGGCGATCGAGCGCGTCTCCGCCTTCCCGCCCGCGTTCCGCCGCGTGGTCAACCGGCTCCACCCCTCCGTGCTCGCCGTCATGGCGGCGGAGCGCGCCGCCGCCGCGGCTGGTGCTGGTGCTGGCGGCGGCGGCGCGGCCGTCCCCGCGCTCGAGAACATCTCTCACGGGCAGCTCCAGGTGCTCTCGTCCGTGCTCCCTGACCACCCGTCCTTGTCCAACGACCCCGACAAGCCGTCCTCCTACGTCTGCACCCCTCCTCTACTCATGGAGTGCCGCGGCGTGGCCAAGCAGTTCGATGGCAAATTGCTCATGGTACCCAAGCATTCAGGTTTGTTTCCTTGAATCGAAGAGCTCCTGTAATGTGCCATACTAGTTGAGCTGAACACTAAATTGACTTAAGCTGTGTGGTATGGGTTGATTTGGAAATCGTAGATTGGTTCTCGCCAATGACGGTGCACAGGTTGGAGAGGCAAGTGCTGCCGCAGTTCTTCTCAGGGAAGTCCCCGGGGCACACGCCAGGGAAATACATTATGTTGAGGAATAGGGTAATTACAACGTATCTGGAGCGTCCTGCGAGGAGGCTTGCATTTTCTGAGTGCCAAGGGCTTGTCACAAGCACGCCTGAATTGTATGACCTGAGTAGAATTGTTAGGTTTTTGGACGCTTGGGGGATTATTAATTACCTTGCGGCTGGGTCTGTTCAACGGGGCTTGAGGATGGCAGCAACACTAATCAGAGAGGAGCCAACAGGGGAGCTGCATCTCATGTCTGCTCCATTGAAATCAATTGATGGTTTAATTTTGTTTGATCGACCAAAATGCAGTGTCCGGGCAGAGGATATTGCTTCTGGGGCATCAATTTCATCTTCTCCAGGGATGGAAAATGGTGATGCTGGTTTTGATGAGAAGACATTGTTGGAGAGATTGTCTGAGAGCTTTTGTAGTTTCTGCGCACAACCTTTGCCTAGCTTGCACTACGAGTCACAAAAGGAGGTGTGTATAATTCTGACTGCCAATTAGATATTTATCATTCTTCAAATGTTGAATACACAAGTCAGTAATAATATTTGGTGGAATTAGATTATATTTGACACTATTAGATGGAGTAATTTGATCTTAAGAACAATCAGAGTCCAATTGAACTAATAAGGAGTTTTGTATCTTCTATGTATGTGCACTGGACAACTATTGTAAAATGGATGGTGTATTGTCTAGTGTGCGAAACTGCATTTTTGTAGCAGATCCATTTAAGATATTGATGTGCATATGCAGTGTTCTAAAAGTCACCGATAGGCGCTAGATAACTGCAGTGATTAGGTATTAGGATGGTGCATTAGGCTAACATGTCTTCAGGGTTCTTGTTCTGCTATTTTAGTGTTCTACTACCTCTGTTCTCAAATAGATGACGTCCTAGAATGTGTGTAATCAAACCTCGATATCGTGTATCATTAATAAGATATTAGGATTTTATATGTGAATTGTATTAACAGATTTGTCCTGAAAAACACTTTCATATAGTTATTTCTAATAATTTTTATAAATCTAAAGTTAAGAAAAGTTAATGATGAGACATGTGCATTGGATATTGTGTCGATGTCCAAATTGTAAAGTAAAATAATAATGGAGGTAGTATTGCCTATCTTCTTTTGTAATATGCCTGATAATTGCTTAGAATTCTCTAGTTAGGCTGGTCCTAGTTGCCACCCCTGTTGACCCTCTTGCACAAAGTGCCTTCTTGAATCATGTGCATCTTCATGGATATCTATATCTCTTGCGTATTTAGTAATTTTATTCTGCTTTCTCTTGCGAAATCCCTTTCTTTCTGAAAGAAGCTTGTAAAGGTGTTTCAGGCTTTCCTTTTAACTGACTAAGCAGGCAGACATTGCTCTTTGCTCGGATTGCTTCCACGATGCAAGATTTGTTACTGGGCACTCAAGCTTAGATTTTCAGAGAGTGGATGGGAAGAAAGATGGACTGGGCAATGATGGGGACAGCTGGACTGATCAGGAAACATTTCTGTTATTGGAGGGCATAGACAAATACAAAGAAAACTGGAATGCTGTTGCGGAGCATGTTGGAACAAAGTCGAAAATACAATGTCTTCACCATTTTCTTCGTCTTCCAGTAGAAGATGGATTGTTAGAGAATATTAAAGTACCAGAAGCATCCTTTTCATCGAAAGTACAAAACAATGGTTTTTTGCATTCAAATTCCAATGGCAGTACTTCAGGTTTATTCATTGTTTCTTTACTGAAAAACGTAACATTTTTTTGTGTTGGATATCAGTTTTGGTTGATGCAAAATGCTTCTGGCTCCGTTTTTAAATTGCCACAATTGTTTGCCTTAGGAAGCTTGCCTCAAAGCGGCGAAGCTGGAGACCTTCCTTTCATTAACACTGCTAATCCTGTCATGTCACTGGTGAGTGACTGCAGACTATGTTGTTTATTATGTCATTGCACTGCTCAATTCAAATTTGGGTGCTGAAACCATTATGCTCCATTGCAATATCAGTCATCTTCACTGCTTTTATACAGCCCACTTTTAGAGATATACATAGTTTCTTGCCATTGACCGAATTCTCAAATTAAAAAACACCTGATGTAAGACAGCTGGGATTTATTGTATAGGCAAACCACAGCTTTAGTTGCAAAGCGATGGGCATTTTATTATTTAATATCTCGTGCAGACCATCATTTAGAACTAACATGATAGCTTGCGGCATGGGACAAGACATGGAAACATAATATCTAGGTGGAACTTAGTAGATAGGTAGAAAACTATGATAGTAATCTCCCACATACTGGATCATTCTCCCCAGATCTTGTCAGTTTATTGTAGATCTCTATTATGTCTCTGGCCTTACTGTTCAGAGATGATTTGCAGATTGCATTTTTGGCCTCTTCATTAGGACCAAGAGTTGCGGCATCCTGTGCAAGTGAAGCATTAATTGTTTTGACTGGAGGTGACTCCAGGTGAGCCACCTATGCTGTGTAAGGGAGGTTTAGGGATGAGATTAATGAACTCTTAGCTCCGACATGTTATACCAGTTCTATAACTGGAGTGTAAATTGTTCTACTTCGGGTCTTTACACTTACTTTTCACTTTATCTCACCTTGCTGGATTTCTCTTAACACAATAATGTTCATCAATTAAGGATCAGTTCAATTGGCAATGATGTTATGGGCCATGCTGCTCAACCGAACTGTGGTGACTGCCTTATTCCTAAAATTAGTAATTCCGCATCCTTCAGTCTTTCTTTTCAAGATGTTACTCTAACATGCAGTTTTATTTTAATACAGATTCCTCATTGGCTGTCTCTTCAGAAAATGTTAGACATGCTGCAAGATGTGGCTTGTCGGCAGCAGCAACTAAGTGTAAACTTTTTGCGGATCAGGAGGAGCGTGAAATTCAGAGATTAAGTGCTACCATCATAAATCATCAGGTTTGTTGGAATACAGAAGTTCACATTCTGCAATTTGTTCTAATGGTGATGACAATCTAGTTAGCTTCATATTCTTTTGTGGCATTGTTTTTATTTGTATTAAACTAGCTGATTTGCCCGTGTGTTGCCACGGAATCAAAGGATTTGAACTAGGGAGCACAAAATTTTCACCGACATTGAGGGTCCGACACGTCAGTGATAGGGTGTTGTGGTGGTAGATTCACTACCACTACCACTACCACTACCACTACCACTACCAACATTTATAGTAGTATAGAGTACTATCTCCGCTTCAGGTTATAAGACTTTCTGGCATTACTCACATTCATATAGATGTTAATGAATCTAGGCACACATATATGTCTAGATTCATTAACATATATATGAATGTGGGCAATGCTAGAAAGTCTTATAATATGAAAAGGAGGAAGTATAGATGAAGCGTTATCAGTCCTTGCTCATTTCTTTTTGGACTTGAAGAAGCCTTGAAATCTGATTCTGAATGGAATTAGCTATAGTGCAGAAACAATATTATGCTAATTTGATAAAAACATGGATCACAACGGTCAGTTTGTGATTGGACGATGATAGTTCACAATCTACAGTGACATGTCAACAAACTGACCAAGCATTGAGAAACAAAAGAGGTTGTGACTTCTGAGCATAAAAGATAGTCACTGAGTAGCATCAACGCCCATTCGGCAAGTATTGGCTTTACCCAGTGGGAGAGATTTTTTTTACAAGTTTTGATGATTCTAGCTAATTTGGAGTGTGGATAAAACAGATCCTCCTGTGACAATAATTTTAATAAGTTTCAGAAACTTAATTACCCAGGGTTAAAACTGGCTTTTAGTTAAAACCAGGAGGATCCAGCGGGGTTGAATGTTGATTTATCTTTGGAACCTTAACCAGCCTAGTAGCCTGTTTTAGTGTTAACCAACCACCTGGTAATTGACATCAGTTGTCCTCCAGGAGTTGGTTCCTAAATCTGATATGAAATTTATGCATGTGATGTGGGGGTTAATGACTGTCCAATATGTCATTTTCACTTGATTATGCCATACTGGCTGATATTTGATGTGGCTTTCATCATTTTCATTTGGACTCTTTGCTGTTATTTTTGTAATACTCATTTGCAGTTGAAGAGGCTGGAGTTGAAGTTGAAGCAATTTGCAGACATCGAGACCTACCTTTTGAGGGACAGTGAGCAGTCGGAGAGGATGAGGCAGGGGCTGCAAGCTCAGCGCATCCGGATGATGTCAGGGCTTCGGTTAGCTTCACCCAGAGGCAACACTATGGCCTCAAATCCATTGAGTCAAGCGAACATTCGACCGCCAGGAATACCGGGATCGATGCCCCAGGCCGGCACTCCAGCTTTCTACTCCAATAACATGCAGGTGCACCCACAGATGGCTTTCTTGCAGCAGCAGATGCAGCAACAGCAACAAAAACAGCAGCAACAGCAGCAGATGCAGCTGCAGCAGCAACAGCAGCAGATGCAACTACAGCAGCAACAGCAGCGACAGGCCTTCTTGCAGCAGCAACAGCAGCAGATGCAACAGCAACAGCAGCAGCAGCTGCAGCAACAGCAGCAGCGGCAGCTGCAGATGCTCTCTTTCGGGGGTCGATTGCCTCTGTCAGCGATGAACGCTCCCTCAACCTCGGCAGCGCCCAATGCCATGTTCGACAACCCTGACATGCCCGGTCCATCGAATCAAGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037090