Os12g0194900

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0194900| Description = Similar to Amino acid carrier (Fragment)| Version = NM_001072885.1 GI:115487731 GeneID:4351717| Length = 3839 bp| D...")
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Gene Name

Os12g0194900

Description

Similar to Amino acid carrier (Fragment)

Version

NM_001072885.1 GI:115487731 GeneID:4351717

Length

3839 bp

Definition

Oryza sativa Japonica Group Os12g0194900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4880092..4883930

Sequence Coding Region

4880179..4880236,4880806..4881039,4881160..4881253,4882505..4883087,4883170..4883607

Expression

GEO Profiles:Os12g0194900

Genome Context

<gbrowseImage1> name=NC_008405:4880092..4883930 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4880092..4883930 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaggagagcagtagtgtatgatgctgaagcagttgatgatcatgagagacaagggacggtgtggacggcgacgtcgcacatcgtggcggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtgggtggtggggcccctcgtcctcgttggcttctcatgtgtcacttactacacatctaccctcctcgccaattgctaccgctaccccgaccccgtcaccggcaccgccaaccgcgagtacatcgacgccgttcgctgctacctcgggccgaagaacgtgatgttgtgtgggtgtgcgcagtatgtcaacctgtggggtacacttgtcgggtacaccatcacagcgagtgcaagcatgatagcggtgaagcgggtgaactgcttccaccgggaagggtacggcgccggcgactgcggcgcgtcggggagcacgtacatggtggtgttcggcgtcttccagctcctcctctcccagctcccctccctccacaacatcgcctggctctccgtcgtcgccgtcgccacctccttcggctactccttcatcagcctcggcctctgcgccgccaagtgggcctcccacggcggcgccgtccgcggcaccctcgccggcgccgacctcgacttcccccgcgacaaggccttcaacgtcctcctcgccctcggcaacatcgccttctcctacaccttcgccgacgtcctcatcgagatccaggacacgctccgctcgccgccggcggagaacaagaccatgaagagggcctccttctacggcctctccatgaccaccgtcttctacctcctcctcggctgcaccggctacgccgccttcggcaacgacgcccccggcaacatcctcaccggcttcgccttctacgagcccttctggctcgtcgacatcgccaacatctgcgtcatcgtccacctcatcggcgcctaccaagtgttcgcgcagccgatcttcgcgaggctggagagctacgtggcgtgccagtggccggacgccaagttcatcaacgcgacctactacgtgagggtgccggggaggtggtggccggcggcgacggtggcggtggcgccgctgaagctggtgctgcggacgatcatcatcatgttcaccacgctggtggcgatgctcctccccttcttcaacgccgtgctgggcctcatcggggcgctcggcttctggccgctctccgtctacttcccggtgagcatgcacgtcgcccgcctcggcatccgccgcggcgagccgcggtggtggtcgctgcaggccatgagcttcgtctgcctcctcatctccatcgccgccagcatcggctccgtccaggacatcgtccacaacctcaaggctgctgcacccttcaagactgtcaactga</cdnaseq>

Protein Sequence

<aaseq>MDRRAVVYDAEAVDDHERQGTVWTATSHIVAAVVGSGVLALAWT VAQLGWVVGPLVLVGFSCVTYYTSTLLANCYRYPDPVTGTANREYIDAVRCYLGPKNV MLCGCAQYVNLWGTLVGYTITASASMIAVKRVNCFHREGYGAGDCGASGSTYMVVFGV FQLLLSQLPSLHNIAWLSVVAVATSFGYSFISLGLCAAKWASHGGAVRGTLAGADLDF PRDKAFNVLLALGNIAFSYTFADVLIEIQDTLRSPPAENKTMKRASFYGLSMTTVFYL LLGCTGYAAFGNDAPGNILTGFAFYEPFWLVDIANICVIVHLIGAYQVFAQPIFARLE SYVACQWPDAKFINATYYVRVPGRWWPAATVAVAPLKLVLRTIIIMFTTLVAMLLPFF NAVLGLIGALGFWPLSVYFPVSMHVARLGIRRGEPRWWSLQAMSFVCLLISIAASIGS VQDIVHNLKAAAPFKTVN</aaseq>

Gene Sequence

<dnaseqindica>88..145#715..948#1069..1162#2414..2996#3079..3516#cccttgcacactcattctctagagaagggagagagaagagtgtagtagtagctagctaggagaaagagagagatagagagagaaacaatggacaggagagcagtagtgtatgatgctgaagcagttgatgatcatgagagacaaggtatgtgtacatgatgatcaatagctagtttactttgcacctaattgattgatgtaatattcagaagtgcccaattaattgtcaaaagtttattcaaataactactgtctgaacccatgctcatctctctatgttttttcctcgaaggcttttagaaggtctttgcatttgattgtgagacatgcatgtgtgggggttgtcatgcatgcatgccttttgctttgcacaacataacagaatgttaagaggggagctaggggacaaccttttctgttagcagagtgacatgcataaatgatgcaggatgtttgaaagctgcagttcaaaacatggtccatgcatatgcgaagcacacaggaccaatacatactcacatcattcatctacctttttagcttctaactaaaaaccacccagtcttaattactgtcaaattaaatcgatctgcccctacttgtcgtcatctcaatcacaaggaaattttgacagtaattgcaagtgtgtttacttgagctctctgcattgggttgatatgagatgatgatgatgatgatgatggtgatgatcagggacggtgtggacggcgacgtcgcacatcgtggcggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtgggtggtggggcccctcgtcctcgttggcttctcatgtgtcacttactacacatctaccctcctcgccaattgctaccgctaccccgaccccgtcaccggcaccgccaaccgcgagtacatcgacgccgttcgctgctacctcggtataatatatatatatcattataataatattattgtatttttacgatctataagaaggtaccacgagttaaaaagtgtcttaacggtgatatatacgtcaattttctcatgtgttttagggccgaagaacgtgatgttgtgtgggtgtgcgcagtatgtcaacctgtggggtacacttgtcgggtacaccatcacagcgagtgcaagcatgatgtaagttgctaattgccaatgttaagtatatatgctcgtgcccttcaattagattcaccaatcatcatatataaacgaatggaaattgaacttattttacgtacgtccgtggagtacgtgcatgcgtatatacatcaaacttggggcaaattaactaatcagtgcacattagaacttgaataattacagtgacctggcatgattaagatcttgatttaatatcgctttaacttttttttccatggtgcgttcgtgctcacatcctcctaaactttgtcgggatcgaaaacgtagtcgacaaatcagacagtagtaaaagtgcaccgaaaaaggtggcagagtatgtggctttaattagcagcctacatatagctgattagattatattaattaggctactttaattatccagtctacgagcataacttcgccctgaaacgaggagaatcccttgcaagcatcaacgatcgattttggatgcaaattaacacgcttaatgcgtgacacatcttggttggttaattagcacattctgcacgtacgtacggttgcatgcacgtatctggcgtgacactcacacatgcatgcacacttgtcactgttgcaatttcctaactactcatatagctcttaattgtaaaactaatcttgtgattagagaattattactctatccaatatttagaataacattcaattgctactattaatgatttctaaaatatttagattaaagaaatgatatccataaacttagctccaaaaatattcttataatattataaacatatcaaaattttataaacttacctttattataaaattgacggccagaatttcaaaagttttaacaacccccctcccccctaaatgccatgtttggcagtaacatcgagaaatagtattgtggttagtgaattaatttttacaaataatattttgagttcctatactagtgaattaatgttgagatactagatcgaagcattaatacacgtctaattaaagattactccctccgttttagactataagtcgttttaactttagtcagaacaacatttttcatccaagacaaatatattataacaatattgtcaattatagatttaataaaattaatttgatgttacaaatatatatcactatatttgtccataaatttggttaaatttaagtagtttgactttgatcaaagtaaaaataacttataatatagagagtaattgattaattaatggatggatgcagagcggtgaagcgggtgaactgcttccaccgggaagggtacggcgccggcgactgcggcgcgtcggggagcacgtacatggtggtgttcggcgtcttccagctcctcctctcccagctcccctccctccacaacatcgcctggctctccgtcgtcgccgtcgccacctccttcggctactccttcatcagcctcggcctctgcgccgccaagtgggcctcccacggcggcgccgtccgcggcaccctcgccggcgccgacctcgacttcccccgcgacaaggccttcaacgtcctcctcgccctcggcaacatcgccttctcctacaccttcgccgacgtcctcatcgagatccaggacacgctccgctcgccgccggcggagaacaagaccatgaagagggcctccttctacggcctctccatgaccaccgtcttctacctcctcctcggctgcaccggctacgccgccttcggcaacgacgcccccggcaacatcctcaccggcttcgccttctacgagcccttctggctcgtcgacatcgccaacatctgcgtcatcgtccacctcatcggcgcctaccaagtaattacccatcatcgtctcacttcctcgttaatggcgggcggcgatcgacgatgatcttatgtttgataatttgctgcaggtgttcgcgcagccgatcttcgcgaggctggagagctacgtggcgtgccagtggccggacgccaagttcatcaacgcgacctactacgtgagggtgccggggaggtggtggccggcggcgacggtggcggtggcgccgctgaagctggtgctgcggacgatcatcatcatgttcaccacgctggtggcgatgctcctccccttcttcaacgccgtgctgggcctcatcggggcgctcggcttctggccgctctccgtctacttcccggtgagcatgcacgtcgcccgcctcggcatccgccgcggcgagccgcggtggtggtcgctgcaggccatgagcttcgtctgcctcctcatctccatcgccgccagcatcggctccgtccaggacatcgtccacaacctcaaggctgctgcacccttcaagactgtcaactgatcgatgatcattaatttgatcgcttattaagtggttaaattattcagttaattaatgatcgatgatctagttgttagctcagcaacaagcaccatcagccatcagggagctgcctagctagagctgtggcctcattttgtttctaatttctttctctctgttttttttttggtgaatgattgatcgatctcaatgtactgaggttggttaatttttcttgctgctggttaatttgggcttaattttgatcttggagtaactagaaaacatgtaattcatcgtgttgaggatgagcaatgcaagaaagaaaataattattcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0194900, RefSeq:Os12g0194900