BGIOSGA037159

From RiceWiki
Revision as of 08:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037159| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037159, complete gene.| tag = OsI_378...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037159

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037159, complete gene.

LocusTag

OsI_37819

Ensembl Transcript ID

BGIOSGA037159-TA

Ensembl Protein ID

BGIOSGA037159-PA

Length

5964

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5802033..5807996

Sequence Coding Region

5802033..5802092,5804809..5804906,5805718..5805805,5806562..5806616,5807554..5807996

Genome Context

<gbrowseImage1> name=IndicaChromosome12:5802033..5807996 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:5802033..5807996 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGCTAAGTCACCATCACTTGGAATCCCTTCACCTCCAGTTGGAATTTTCGCTCAGGTTGTCCCTGTTGGGGATGGAAATATTGTTCAAGTTATCAGCAGGCTATACGTTATTCCCGATAACCCAAAAGAATCCTCAGCAGTGAAGAGATTCTGGGGACTCACTGGTCAACTTGTTGACCTTTCAAGGCCAGGAGACTTCAACCAAACAATGATGGAACTAGGAGAAACACTCTGCAGCAAGGTTGTCCCTGTTGTGGATGCAATAATCATGGTACTGTTGTTCGAGTTATCAGCAGGTCAGATGTTGGTCAATATGTCCACATTTTCACACATTTGCTTGACGATGCTTGTTGAGCTCAAGTTAAAAAATTTTTGGACAAAACTGGATGACATTCAGGAGGTGTGGCAACAGAAGGTTGACAGTCAGGGTCCCTCTTCGATACTCTATGTCAAGATGGCCAGAGCGGCGAAGAAGTTGCGCCATTGGGGACAGAGGAAGATAAGCAATCTGAGGCCGCGTCTCCAGATCGCAAACAAGATCATCTTCCAACTGGATGTAGCACAAGGAAACAGGCCCTTGTTGTCGCAAGAGCTGCGATTCAGGGCTGGACTCAAAGGGCAGGATCTACCTGACGCTTGCCTCCCTAGCAAGGATAAGCGCATGGCAAAGGGCAAGAATAAAGTTTTTAAAGAGGGCGATGCAAACACATATTTCTTCCACATGAAAGCTAAGGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MSAKSPSLGIPSPPVGIFAQVVPVGDGNIVQVISRLYVIPDNPKESSAVKRFWGLTGQLVDLSRPGDFNQTMMELGETLCSKVVPVVDAIIMVLLFELSAGQMLVNMSTFSHICLTMLVELKLKNFWTKLDDIQEVWQQKVDSQGPSSILYVKMARAAKKLRHWGQRKISNLRPRLQIANKIIFQLDVAQGNRPLLSQELRFRAGLKGQDLPDACLPSKDKRMAKGKNKVFKEGDANTYFFHMKAKA</aaseq>

Gene Sequence

<dnaseqindica>1..60#2777..2874#3686..3773#4530..4584#5522..5964#ATGTCTGCTAAGTCACCATCACTTGGAATCCCTTCACCTCCAGTTGGAATTTTCGCTCAGGTAATCTGTTATGCTCTTTTGTACATAGTCATTGATGCTGTTTCTTGTTTACGTATAGCATGAAAAATAAGATGTTATTTTTCAGATACTTTGAAGTATTAATATATTTCTGTTCCATGTTTGACACTAGCAAGTTGTCGTCTTTAGAGGGTGCATCTTACATAGAGTATGTCTGCAATGAAAATCTGAATGTGTGAACTTAATCGTCTTCAATTACATATTGTGTTGATAGTGTGTCATTCTTATCTTACTGCAGAAGGAATAAGTCATTTCAGTGGGTAGATCAGGGATAAATACTGAATCAGTAAAGATTATTTTAAAAATGGAGGCTTTTGGAGAGGTCAGTTTACTTGACATCATACATTCATACTATCATAGGCATTTCAAACTTCCAATGTTCTCATTTGGATTAGTAATACAACTGCTTGTGAGCACAATGCACATAAAATACGTGTTAAAATTTCACATTAGTATGTATATTTTCCTTGAAAAGTAGTTGATTTTGAATATTAAACAGAAGAAGATGCTCCGCTGGCCTACCTGAGGGTGTTGTTGAGGAGGAGGGGCTCTTGGACCGTCCAGTCACAAAGTTTGGTGCATAAAGCAATGTGTCAGTCAGGTATGCACTACTGCATAGCATTGTGTTAGTACTTTCGTTGTCAATAGCTTTAAATGGGTTCAAAACATTTGGATGAAATAAGTTGTTTAGAAACCCATAATATTAGTAGATTACAAAATGTGGTTCATTTGTAAAACTTAACATCAATAATGTATATAATGTTGCGTTAAAGGAATAACTGACTGCACATGCTATTGTGATGAAAAGGTCGTCTTAGAGAGGTAGCTGAACTACAGTAAAAGTAATGTGTGCTTAACAAGCTTGATCTTTGTATCCACTTCAATTGGTATGACATGCTGCAACACACATAGCACTTTTTAAGAAAAGAACATTTGATGTAAACAACTAGCTGAAGGGTTGTGCCTCCTCTGTTCCTTTATTATTGCTCAGGTATCCAATACTCCATTTGATGGAATATAGAAGCCTGATTTAGTGTCACGAGCAAATTACCTTCTCGATGTTGCTCTAGGGACAAAGAATATCAACTACAAAATTCCTATTTGCAGTGTCTACAAAGTAGCATCTGAAAAGGTCGGTCATGCAAACTGCTGTAGTTGGTAAAATGGGTGCTCTACCTACCATATTTATTTGGAAGATTTCCCAGGAAATGCATGGGCAGTTTCATATTTTGCAAATATTGAATGTCTAGCCATTCCAGGCAAGACAAAATTCAGTAAACCAACTGTTGATGTACAGGAGAATGCTCAGGGAAGGTCTTGCTTAATGAACAAATGTTCCACGTCCACTTCCATCTTTTTTTGGTTTGGATTCAAGAGGACAAATGATTCGTCTGATCGACCTATCTCTATCTTGAATTCCATGGAGATCTACCAATACAAGATGGTAAGGCAATTGTATGTCTGTGTGTTTTAGAATAGATGAAAAGAAAAATCACCTGTTCTCTTCTAATTCTGTTTTGTGGTAAATATTAACAGCAAGCACCATGTCCATCTTGGTCTCACGGTACTCTCAATCGGGTTGGGTGAAAGAGGGTGGTGACCTTTGCTTACGAGCATGATGGTCTTGGGTGCAATGCAGTTCAGAGGCAAGACCCCAGATACTTTCAATGTATAATGGTCATGTCATCTGCCTTCTCTTAATGTGGTTTTCTGGTCAACATTTGAAGTATTTGAAATCTAAGGATTATTTTTTCCAGCATATTATTAGGGAAGAACATTAAAGGAAATTAATGAGGCTATCGAGGCTTGTAAAATTTAAGCTCAGAATGTTAATTATTTCCTCTCCTCTGCTAATAGTTGTATTTTATCTGATCTACATAATTGTTTTTTTTCAAATTCAGAAGTACTGATGGTAGCTCATTATCTGGTCAAAATCCTGATTTCACTGGGTGCGGTACTGCTGTGATTTACAGTATATGTGTGCTCCCATTATTTTGTATACTTTGGAAATTTTATTCTTCTTGTTTACTCCTTAGGATGCTTTCCTCTGAACTGCAGTCACCTTGAGACAATCAATTAATTGACTGGTGCATTGCGAACCTCTTTGGGAGACCTACCTTACCTGGAAGGCTGGAGTGTTGTAAGCTCTACTCTTCAGTGCACTTTGTTACCATTGGCAGTTGTATAGTATTTTGGGAATATTGGCAGTAGTATAGTATTACTGTTTGTGTTGTAGTTGGGGCCATATTGGTTCTTGTTGCTAACATTGGATATTACATTCTTACGTGCTCATCAGATGGTGTGTTTTCTTTAGCTCATTGGACTTATCAAGTTTGATTTGCATGTAGCAATTGATTTGCATCCCCAGAATCTGTTGTTATTGTGGCAGCAGCGAAAAAAGTTAGGCTCGTATTTTAGTGAAGTGGACACAGAATCAATGCACAAGAAAGATGAATTGACAGACAGCTAATAGAAATGTTGGTAGGGAGCAAAGCAATATTTTCGGCATGCATATTGGGATGAATATCTTTGTAGCTTAATAAGATTTACCTTTTTTGTTGCAAAGTAGGGAGCAAAGCAAATTGTTGAAAATGCGAGTTCCCTTGCACATCAGAAGCACAATTTATATCCTATTCAAATCACCATGGCTAAGATACTTTACATCCTCACATGATTACGCAACTTCTTGCTAATGTAGGTTGTCCCTGTTGGGGATGGAAATATTGTTCAAGTTATCAGCAGGCTATACGTTATTCCCGATAACCCAAAAGAATCCTCAGCAGTGAAGAGATTCTGGTAAGCAACTATCTTTGTTGATCACTGATAAATCTGTGCAGATACATATCCCTATGTGCTGTGACTTGTACTTTTTTTGCCGGGTCGACCAAAGGAACCGGCGACCAAATTTCATCAAGATAGGGGAAAAAATAGAGTTACAAAGAGTTTCTTGCTTATAATGACAGTAGGCTGTCGAATTGGTGCTGTGGCAAAGCCGCAGTCCCCACAAGCTAGGAACAACTACAACACCGCAGCTGGAAAATTAAGAGTTACATACTGTGAAATAGCCAGCTTCTTTCCACACCACAATCTTTTCTTTTATAGCTTCCACTAGCTGGTCAGGGCTTCTGGATTGTTGATCAAATACCCGTGCATTGCGTTCCTTCCATATCTGCCAGCAAATCAGCAAGCAAGCGCGGTCGAAGTTGGTCCTGTAGCACTTCCGAAAACAGAGTCTGACCTGCATCCACCAGTCTGCCAGGCCAAGGTCTTCCATCCCACTGCTGTGACTTGTACTAAAATAGCACTGAGTTTGGTGATACATCGTATTACATTATCATTATTTTGCACATCATTGGCATTGTACTGAACTACCTGTATACAACTTCAGTCAAAATGCACATGTTCATATAGCCAATTTGCAATACAATTTACAAGCTCAATTTGCAGTTCCCTGATCCCCATCCAAGTGCAAGCCCTAATCATGTCTTTTTTCTCATACAGCTTTTTTTTTTTTTGAAACGGTTCATACAACTATTTTTGAATTGGAAACTTTATACTGATCTGAAAACTTCCACATGGCTTTTGAACATTGTTTTCCTGATCACAGGGGACTCACTGGTCAACTTGTTGACCTTTCAAGGCCAGGAGACTTCAACCAAACAATGATGGAACTAGGAGAAACACTCTGCAGCAAGGTGAAGCTTGGTTGCTCCCAGTGCCCCGTCTCTAGCCATTGCCAAGCGCTCGCACTTTCTAGCCAAAATGCTTAAGTCAGAGTTACAGACTACCCACGACTGGTTCCAAAAACCAAAACGGTGTGATTTTGTTGCTGCTTGTGTTGTTCGAATTGCACATGGGCTGGATCAAGGTATAGCAGATGCGATGGGCATGAACATTCTTTTTCTACTGATCAAGTGGCCAGAAGAGGGCCTGCGCTCTGGGCTATGGGAGTTCCCATCTGTTCTTGTAAATGAAGAGACTGGTGCATTGAACAGGAGAAAGAGGTGGACAAATGTGAAACGGAGATCCAGTGGTGATCCTCAAGGAAGATCTTGGCCAACATGTTCACATTGTCTCACACAATTGCTTGACGATGTTTGTTGAGCTGATCATTTTGAATCTGAAAGGTAATCATCTGTTGCCCACACTAGCATACTAGCAGTTACATCCTATCATTAATGTTATGCCTTTTTTTACTGTAGATGATTTGGATCAATTATGCAAGGAGGGACAAGATAGCACCAAAACTGAGATTCATTGATGAGAATGTAGTCGCATGGGATTGACACCAGGAATCCAGAAGGGACGCACAACTCATTGTAGTAAAAATATTTCCTCAGATAATTATATCTTTCAATGAAGTTGGGTTCCACATAATTATATCCTATTCAAATCACTATGGATATGATCCTTTACATACACATGATTATGCAACTTTCCTGCTAATATAGGTTGTCCCTGTTGTGGATGCAATAATCATGGTACTGTTGTTCGAGTTATCAGCAGGTAAATAATATCCCTGATAAGTGATAACCCTCCTCAACGGTGATTTGGTGAAGAGACTCAGGTAAGCAACTATCTTTGTTGGTCACCAGTAAAGCTGTACACATACATATTATAAATAGTAATACTAAAATAGTACCGAGTTGGTAATTCATTGCATATCAGTATGTTGCACGGAACTGACATTGGGCTGATATACCACTCAGTGAAACTGCTCATGTTCATAAAACCAATTTGCACCGCAATTTACAAGCTCGATTTGCAGTCCCATGAACAAGCCTTCTCTGTATACAGTGCATATTGAATTGATCCTCCTGTAATCATATTATTTTTTCATACAGCTAAGCTTTACAGTGATCTGAAAACTTCCATGTCTCTTGAACATTGATACTCGTTGATCACAGGGAGCTTAATGGTTAAGTGATTCGACCCTTCAAGGTGAGGAGACTTGAACCAAGCAATGATGGAGCTAGGAGCGACACTCTGCAGTGACACAAAGCCCAGTCGCTTCCAGTGCCCTCTGTCTCTAGTTGCTGCCAAGCGCTCTCACTTTCCTGCCAAAGTGCTTCAGTCAAAGTTACACACTACCCACGAGTGGTTCTGAAAGCCAAACCACGGTGTGATTTTGCTACTATCTGTGTTGTTCAAATTGCACAAGGCTTGGATCAAGTTACGGCTGATGCAACGGGCAACGGCCTTAATCTCTTTCTACTTATCAAGAGGCTAGAAGAGCTCTCCTTCTTAATATACTTTGGCCGGCTGTCTTTGCCGGCCCGGTGAGAAAAAAAAGGAGGCCAGAAGAGGGCATGCTCCCATCTGTTCCCATCTGTTCTCGTGAACGAAGGGAAGAGTGATGTGCTGAACAGGGAAAAGATATGGACAAATATTTGAAGCAACTCCTTAGCATAGATGTGAAACGGAGATCTAATATAATCCTCAGGTCAGATGTTGGTCAATATGTCCACATTTTCACACATTTGCTTGACGATGCTTGTTGAGCTCAAGTTAAAAAATTTTTGGACAAAACTGGATGACATTCAGGAGGTGTGGCAACAGAAGGTTGACAGTCAGGGTCCCTCTTCGATACTCTATGTCAAGATGGCCAGAGCGGCGAAGAAGTTGCGCCATTGGGGACAGAGGAAGATAAGCAATCTGAGGCCGCGTCTCCAGATCGCAAACAAGATCATCTTCCAACTGGATGTAGCACAAGGAAACAGGCCCTTGTTGTCGCAAGAGCTGCGATTCAGGGCTGGACTCAAAGGGCAGGATCTACCTGACGCTTGCCTCCCTAGCAAGGATAAGCGCATGGCAAAGGGCAAGAATAAAGTTTTTAAAGAGGGCGATGCAAACACATATTTCTTCCACATGAAAGCTAAGGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037159