Os12g0197200

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0197200| Description = Conserved hypothetical protein| Version = NM_001189903.1 GI:297728936 GeneID:9267371| Length = 7417 bp| Definition ...")
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Gene Name

Os12g0197200

Description

Conserved hypothetical protein

Version

NM_001189903.1 GI:297728936 GeneID:9267371

Length

7417 bp

Definition

Oryza sativa Japonica Group Os12g0197200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5020005..5027421

Sequence Coding Region

5022329..5022565

Expression

GEO Profiles:Os12g0197200

Genome Context

<gbrowseImage1> name=NC_008405:5020005..5027421 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5020005..5027421 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgttcttggcagagttctgggaagttaatccattggcatcaaagagatagtattcttggcagagttctggcaaaatgtctttatacagaccctagtgaagtgcctagaagaattgttatggaaaatcctgttaatatgggaggtaatggagagtcatggactctgcacacttctgtgcttaattgggagttcactgatgttcttcctatggatgaggatttacccattttgtggtag</cdnaseq>

Protein Sequence

<aaseq>CSWQSSGKLIHWHQRDSILGRVLAKCLYTDPSEVPRRIVMENPV NMGGNGESWTLHTSVLNWEFTDVLPMDEDLPILW</aaseq>

Gene Sequence

<dnaseqindica>2325..2561#aaattttccacccatccagatccagatccacaccagccacccgaccgagtcacgtgcgtcgccggtcgccagtccgccgggagccgcgcgcgccgccgttcgccagccacctccggcgccgttcgccagccaccacgcgcaccgccactcgctgccttctcgccgggagactgaagctgccgtcgccggccgccttcgtcgacgcgccgccgggccgcgcgacgcctgaagccatcttcaccaggagcggccggcaggctccgtcgatgcgccgccagcctgcagccatcttcaatgggagccgtcgtcgccgtgccgccgggagtcgccgtcgccgcgccaatgggaactgccgtcgccgccgccatctgccgaccatggcttcggccttcagccacctcccccctaaagctacaatagcgacgatgcaaggtgagtatactacaatctgtgactgtgaatatattgtttaaccggggacgggttcaccacggggaaaaattcaccgcgtggtgatcggggctggagaaattatagccccgtcgtggttgacggggacggggacggtgaaatattttcaccgcggtggcggggacgcgggcatgacccccgacggtgaattcaccgttgccatctctattcacgatacaaaaacataatcttgattactgcatgcagctgttgtcacagccacaggattgcagcacattcatctgtaggtgcatcgcgttaccatgtcgtggccctcatggttgtcatgccgcagtaacaaatatcacattattttttacgaatgtcctgattcacttgatatgtttagagactatactggaacatgtttgctagacaaaatttattattgtacttctaaaaagtagtgtatttgcaaagctactatagaaagcatttgtctagatgacacataaactgtttacacggcttacacacctaatttcaagaaacaagtcatattagtgttgagatattttttctacataaacatggtcagttgtaatcctttaccattagcattctatgaaacaacaaatgaatacattatttccctcacttcactgtctgttgaaaaatattttatttatgacgaaaaactatttacatttgtatttgtatttgtatttgtgtattgttagtgtatccagtcgaggaaacatgtcttatattatatttgtatccagtcttatattgttattgtctaatattgtttccagtcatctgagaagtatttgaatttttttattacaacttttgtagtcttagaattgcaatttttagtgaaaatattcaatttagtatcctacatgcaatgaacatattatctatacttgtgaactagttttatgacatttataactggttactaaacaagaatgttatgtcacttatcgctactaatgtgtcaaagaaacacttatcgctactaatgtgtcaaagaaagtaacaaagttatcttgaagatttgccacacaagaagagaagctaacaaaatatagctataattatggtttggcccaatgctcatctaagttgaaccgtttttttcatatttgttttcaagatctagcctctataccaagtttgagtgggtcgataggtgggagaaaacagctatattttttacttatccctgtaaactatcgacatattatactactctcaagaccaaagttaagatacacaaaaaaattctattagagagtataactttctttaataggacatagactacatcagtagcaacttgaatattctatgatcttgtacccgctcgatgtaactgggcgctaagaccccctatcccgctcggtataaaattgactggggccctagtcccacctggtgtaaaattgatgtttagttactcacaataatggtatttaaattgtttagttggaaattatacattgtataacaaacattaagtctattcagaattacggttgaggtggatcttgttacatatataaaatgttgcaactgatccatcaagtggtgcacgccatcaacaatcagttcaacatgcatgtcctctgcgccctcaggtttccactttttatgtctgatctaagttccttctgaattgcacagggatactttgatagccggccagcatttgatgctaaataaaggggctttccaagcacactttataagacctgataatttagcctatcggagaaactgtcccttcaatcaggagagttggataatgattttagggattccttcggattacataaatgagactcacattcataggattgtaaacgcttttgggaagtttatacattggcatcacaaaatagtgttcttggcagagttctgggaagttaatccattggcatcaaagagatagtattcttggcagagttctggcaaaatgtctttatacagaccctagtgaagtgcctagaagaattgttatggaaaatcctgttaatatgggaggtaatggagagtcatggactctgcacacttctgtgcttaattgggagttcactgatgttcttcctatggatgaggatttacccattttgtggtagcaaattgaggatttgcatatggagataccaaatatgcagcatgagaataatgtacttcttgaatttaggggaacaacatgctgaaaagaataatatgcagcatgagaataacgtacttcttcagaatttaggggaacaacatgctgaaaagaatgctcctggccaagtccaagaagaacatgctgaaaagaatgctcctggccaagtccaagaagaaatgcagtaatactatgtctccattgatgatttttccttggaagattcagattcagtccataacctggagtagtatgaattaatataaggaactggaccagttggagatagtgcctttcaagttatcactgtcttccttccctttcagcattcttcctcttaatgtttgctttaccattgcagaaaatgtgtttaaactattgatcactgctttcagccctccatggtcagttcacctgagattacgccaacctggtctttaatcaaagttgttcttctagatttggtaacaaaccaagtcagtggcattcaggcttgatttctctcggttctgaataaggtataaagcatgagtacttatttcccatcacgcaataaaaagtattcatctataaagtgtgaaccacataccttgctaaatgtagttagttttttctttcctcaaccatatatatgctcatttttaaatcatgaaactattaacttgtattcacagtagaaagaacatcaattgagatgtcagcttctcacaggaattttttttttgagatattagttgtccgaaaattaagcatcatgagctcaggagcctctgcggctctgtcctggctttgagtcctcctaacatatacattatcacacaatatgaataaggagtctaacattttaaatatatatttgccattcaagcttgtagttcagttttaacaacaataataccttttgtagtagaaacatctataaacctaagaataagtacaggcttatcataggatttgcattaataacactcgccaataggattctctacttgcatatctactaccttttgttatctgattgcctccatatcagagcttgtaaattttccacctgctgttaaaatctactagcaccaatatctctcaaagaacaggtgctacaataactgtatttagcttattttggattctaagtactacttcagtgatatccagaaccaagaagtaaaatacttgtttctcctagctaactagaataacatcttgggtttaatccaaagcattagaatgatcttcactgggagaaaaaaaatattgcaaattgctagcaaaatttattaacaatgttccaagaaaccaatcatattagggtgaaatattttttttctacataaacatggccagttgtaatcctttaccattagcattctataaaacaataaatgaacacattatttcccttactccaccacctgttgagaaatatttcatttatgactaagaagtatttgcattcgtttttctatgtgtatattgttattgtttccagtcatctgagaaaacaagtcctatattttatttgtatactaatgttttgataactttggcaatgcatcctaaccactacatcttgtgccccaaaacagttataagcatcatctttacatcctcaactctaaaatttagaaataagatgggaatatttcatgataagacaaaatagtgaacttattctcacaaaaatctagaaagagtttatcacatttttcaagtgtttttaatgtatgtctccctcttcttgtgatttgtagttttcatggttttaattataactaacattatccaaattttttgctttagattcatgtggcaactgcttgtagcaatgacaattgcaatctacattcctagatttctactgttggtaggatttgccataggattatctatagatttatgaggtttgaccttcttaggcaaaaaaaaatacataacaaacaacatatacagagaaaacattgacttcttattgaggacactaccactggaagtctcagctagtgatactttttttgccaagttcaatgaccaactcaacccaagagcaggtgtatgcagttgggcagtgttgtgatgacactgatatttttatatcttgcaatatcttttttctctctctatgaagatcattataatgttttagattaaatgcaagatgttcttttagtatgagtcactaaacatcaattttacactgagtgggtctggggggccttggccccccgtcaattttacccctagtagaatagggtgccttagccttctagttacattgagcgggtacaagatcagccttagaaaatcttgcactctgaactgtttaactcaggcgagaactgtgcgaggccgaatatggtgtagttatatttactccctaggaccttctctctttactcctagttggatctgcgtctttttcacctccagaatcaccaaagtctccaatctgtttgctcctagttagttctgcatcattttcatctccagaatcaccaaagccttcaatttccttgctctcagttagttctgcatctttttcacctctagaatcaacaaagccttcaatatttttgctcccagatagttctacacctatatgtgaaacaatgctcataagttctatttgggattgaagtatatatagtacatatcattggtcattcttttagaagtgcttactcgagagctttgttcgtttcttcagtacatgtttcttcctcaaaagaaatagtggtgctaggactactatgattaccacaacgctcggcaccactatagccactattagaatagttgtatggttcttatgatttgttcctgcatgtgattgtcaattgttaatttaatgggtattacaatttcattagcaagaatgaaaataacacatctatttacaaacaagaatgtaaatataaagcacggtgagtttggtatactaccaaggcccctagtagatagtgtcaaaccaatataaactaacaatagtttaatcagtgtatggcaatagatcagcatgtataaacatacttttaaacacggaatgagtctaatataacacatagtgagttcggtaccaaaaatgaaagcaaaattgtagggcccctagtaccttttgaacgaatgtaaactaaaaatatttcaatcaatgtatagcaatagagtatcatgcataaataaactttcaaacataaataaattttgcatctcatacctttaggcttgactgtagcttgatagatgagttggtccaacattggagggcccgtgaagaaaggatatccctcataacgcaagttacaccatattgttgctcttgtcccacctgttgacatactaaaatgcgaactagaggctagatctccaaacaaatcttgcactctaaactgtttaactcaggtgagcactgtgcgaggccgaatatggtgtagttatattcattccctaggaccttctctcgtcctgtagcaaatctttttgataggtctgttatctttcttgccacatcatcaacaaataacatgactgtctcactaaacgacctgccctgactgatataaccagggttgtcctataaagctatattttccatgtcatgttgaatatcaaacttaaaatcttttccagaaattccgaggtggcaaaagttgtaaaatgctatactatccctctttgaagaatatacttgttgtatgtccttaatggccttggtgatacacctcttacaggtactaatatcagtgtcgccacgacactgtgtatacacctgctctttagttgagttggtgatgaccttggcaaacagagtatcactagctgatactttcagaggtaatgttctcaataaaaagtcaatgttctctctgtatatgttgtttgatttatagtttttgccttcacagttcaaactctataaatctgtagataatccagtggcaaattgtaccaacagtagaaatctaagaatgcagattgcagttgtcatttctatggttgccacatgaatctaaaataagaatttacataatgttagttacaattaaaatcataactacaaatggcatgaagagggataaagacactaaaaagcacttgaaaaatatgataatgtgacatcttactgattactagtagtattttttgaaggttattcagcacttacgatgacctatttcaattcgtttaccaaaacaatgaggaaacatatcttttcattttttttccctttttttctattatgacatgtgctgtgatgcagctatttctgtcatcaccatgagttgaaataaatgctaaatgactagaaaaaagaatgggaactaaatgcttccatgtgaaactatttctgctaacatgctttgttgaagatttttgaattgtatactggttaagtggtttttcttagacgtggtagtcacacggtaaaggtattggaagaaccatcatgactgatgccatcagagaggtatctatcgtatctataatttgttttgctcttggaacattatataaatgtcataggtgcacagtttgatgtttatttcagctaccactaccaagaaagctgacgttggatctttctgtgcttccgaagaaggctatgataatgcaaattaaatgtcagaatttcaaagattcattagttggagtaagaataactgaataaagatgctgctatctttctgatgcttccgaagaaggctgtttttttaaatatataatgtaattgacttttgtaattcggctgactattcatcttttttagaaatatttgtgcaaatatacaaacatacaagacatgcttaaagtgattttgatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0197200, RefSeq:Os12g0197200