Os12g0198000

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0198000| Description = Protein of unknown function DUF538 family protein| Version = NM_001072895.1 GI:115487751 GeneID:4351728| Length = 74...")
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Gene Name

Os12g0198000

Description

Protein of unknown function DUF538 family protein

Version

NM_001072895.1 GI:115487751 GeneID:4351728

Length

744 bp

Definition

Oryza sativa Japonica Group Os12g0198000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5069825..5070568

Sequence Coding Region

5070021..5070524

Expression

GEO Profiles:Os12g0198000

Genome Context

<gbrowseImage1> name=NC_008405:5069825..5070568 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5069825..5070568 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccacccaccccctcctcctcctcctcctcgccgccgccgccgtcgtcgtcctcgtcgtagcggcgacaccggcggcggcgagcggcaacgggacgtcgacgccgacggcgtacgagatgctggagaggtacgacttcccgcgggggatcctgccggtgggggtggaggggtacgagctccgggaggacgggagcttcgaggtgtacttcccgcgggactgcgagttcatgctggcgaggacgtggctggtccggtacggcgcccgcatcgccggcgccgccgcctccggccggctcacgtcgctccagggcgtctacgtcaaggtgctcttcgtctggctccccgtcggcgaggtcgaccgctccggcgacactctcagcttctacatcggccccgtctccacctccttccccctctccgacttcgcccacagcccgcactgccgcggttacgaccacctccccgccgccgccgccgccgccgctgccgccttgtga</cdnaseq>

Protein Sequence

<aaseq>MAATHPLLLLLLAAAAVVVLVVAATPAAASGNGTSTPTAYEMLE RYDFPRGILPVGVEGYELREDGSFEVYFPRDCEFMLARTWLVRYGARIAGAAASGRLT SLQGVYVKVLFVWLPVGEVDRSGDTLSFYIGPVSTSFPLSDFAHSPHCRGYDHLPAAA AAAAAAL</aaseq>

Gene Sequence

<dnaseqindica>45..548#aaaacccaatcaaaatcaacccacgagctcttcctcccacctccatggccgccacccaccccctcctcctcctcctcctcgccgccgccgccgtcgtcgtcctcgtcgtagcggcgacaccggcggcggcgagcggcaacgggacgtcgacgccgacggcgtacgagatgctggagaggtacgacttcccgcgggggatcctgccggtgggggtggaggggtacgagctccgggaggacgggagcttcgaggtgtacttcccgcgggactgcgagttcatgctggcgaggacgtggctggtccggtacggcgcccgcatcgccggcgccgccgcctccggccggctcacgtcgctccagggcgtctacgtcaaggtgctcttcgtctggctccccgtcggcgaggtcgaccgctccggcgacactctcagcttctacatcggccccgtctccacctccttccccctctccgacttcgcccacagcccgcactgccgcggttacgaccacctccccgccgccgccgccgccgccgctgccgccttgtgattgggtagagatgggtagttcattaattaatctgggtgatttggctggggtaattacgtgtaattaatcacaggtgctcctggttgattggctattgatgcgaatggaatttacgccactatgggatttattttgagtatatcatttggtggcttctttatgaacaagtgttggatgcagatgctgtttgtttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0198000, RefSeq:Os12g0198000