BGIOSGA037248

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Revision as of 08:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037248| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037248, complete gene.| tag = OsI_380...")
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Gene Name

BGIOSGA037248

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037248, complete gene.

LocusTag

OsI_38010

Ensembl Transcript ID

BGIOSGA037248-TA

Ensembl Protein ID

BGIOSGA037248-PA

Length

3802

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8668668..8672469

Sequence Coding Region

8668668..8668866,8669130..8669182,8669810..8669858,8670093..8670268,8671633..8671753
,8672240..8672469

Genome Context

<gbrowseImage1> name=IndicaChromosome12:8668668..8672469 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:8668668..8672469 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCGGGGGCTGCGTGGAATTGGGCAGCGGGGAGATTCGGTTTGTTGTTTCTGAGGGGGACGGGGTGGAGGCGGTGGAAGTGACGGAGGTTGTGTGGGAGGATGATCCCGGGAGGTTGCTGTGGGAGAAGGGATGCCTTCTCCGCTGCGAGCTGCCGCTGAAGCTCCCGCTCTATGTTCCTTCGGATGATACGTCTGGGAGTAGGGTATGTGGGGATTGTGAAGTGTTAAGGGTAAATTTCAGTAGGCAGTCATTCAATAGCTCAAAGGCTAGCACCCCAGCAGTTGAGTACTTTCCAGCACCTGCATTGGCTAGCCTGAGAGCAATCAACTTGAAGCTAGATATACTTTGCTACACTTCAGTAGATTTCCCTGTAGCTGCTGCTGTGTCTGAGCTTGTTATTCCAGGATTAGCTGATCAGCTGAGCATTATGAAGAAGGCTATTGTATCAGAGCTCACAACTCAACAACCCCAGTTTGGGAAGCGTGCGCACGGAAAACGAGGGAGAAGAGGATGGGAACTAGAAGAGCCGAACGCAGCCTTAACCAAGCAAGATTGTATCTCTACTACTTTAACAGCCAGTAGTGGTGGTGGCAGTGGTGGAGTCTTGGCTTACACCCTTTTAGGAGTTGACTACAACGAAGCCAGTGGTGATTGTGCTTTTCTCATCCTTGATCCACACTATACTGGTGCTGATGATCTCAAGAAGATCGTGAATGGTGGATGGTGTGGGTGGAAGAAATCCATCGACAGCAAAGGCCGTAGCTTCTTCCTGAAAGACAAGTTCTACAACCTTCTGCTACCCCAAAGGCCTAATATGGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MVGGCVELGSGEIRFVVSEGDGVEAVEVTEVVWEDDPGRLLWEKGCLLRCELPLKLPLYVPSDDTSGSRVCGDCEVLRVNFSRQSFNSSKASTPAVEYFPAPALASLRAINLKLDILCYTSVDFPVAAAVSELVIPGLADQLSIMKKAIVSELTTQQPQFGKRAHGKRGRRGWELEEPNAALTKQDCISTTLTASSGGGSGGVLAYTLLGVDYNEASGDCAFLILDPHYTGADDLKKIVNGGWCGWKKSIDSKGRSFFLKDKFYNLLLPQRPNMV</aaseq>

Gene Sequence

<dnaseqindica>1..199#463..515#1143..1191#1426..1601#2966..3086#3573..3802#ATGGTCGGGGGCTGCGTGGAATTGGGCAGCGGGGAGATTCGGTTTGTTGTTTCTGAGGGGGACGGGGTGGAGGCGGTGGAAGTGACGGAGGTTGTGTGGGAGGATGATCCCGGGAGGTTGCTGTGGGAGAAGGGATGCCTTCTCCGCTGCGAGCTGCCGCTGAAGCTCCCGCTCTATGTTCCTTCGGATGATACGTCTGGTAATTGTTCGATCCTCTCCTTGAGCTTCAGAGACTGAAATCCTTTTTGATAGTTGCAGTGCAAGCATGATGGTTCTTACTTTGCATGCATTATTTGAAATATGTAGCACGAATGCACGATCATGTTGTAAATATCTTAAGACTTAGGTACAGCACGATCATGCTGTAAATATCTTGATGTCATCAAGCAAATTGTGTTTGGTATGATTATCTTTCACATAGCAAAATGGTATAATAAGCTGCATGAATGGTTTTTTTAATAGGGAGTAGGGTATGTGGGGATTGTGAAGTGTTAAGGGTAAATTTCAGTAGGCAGGTATTTGCTATGATCAATATTCACATGGTTTGTACAACACAAATATCACCATGATAGTTTACTTGAAGACATTACATTTATTAAAACAGATGGAATACTTCCATTGGATGATATGAATAGAAGGACCTAAGTAAATTATTAGCAATGCAAGGACCAAATTGCTTCATGTGTTGTCAAAGTTGGAGATGTGCCTACTTCACCTGTATGGTTTTGATTCTGGCAAATGTTTATTCAAATGTTTCCAAATTGTTTATTATGTATTGTGTCACTTTTTGCAGGCATTGAAGCAAGGTTTTATTCACTCATTGAATCAACAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGTTTCAAATTGCCTGACTGACATGTATAGAAATGTGAAGTACATGAAGTTATATTGTGCTGAAAATGCCTAGTAATATATATCATATTTGGTGCATTCTATAGTAGGATGATGCAGACTTCTTGTACCATTCTGTGAGCACCTTTCTGAAAATTTGATTTGCTAGAATGCAGATGCAATTCAAATAACCATATTGTCCAATCAGTCATTCAATAGCTCAAAGGCTAGCACCCCAGCAGTTGAGTACTTTCCAGGTACTTGTTTTCTTGAACTTATTTTGCGCCCTCAAAAGTTTAAATCCCTCCATTGTACTGATTGTGGTGTGGCAGCTGGCATTCTGCCTAGTAAAGCAAATTCTTTGTGCAGAAGTACACTTAATTATTTATGCTTCAACATTACTTAATGTCATACAATTTTTTCGTTGTCCACTTCAATTCAGGAAATGTTACTCTCCCTTAAAGTAAATATGCTCTTGTTCTTTTTGCCAGCACCTGCATTGGCTAGCCTGAGAGCAATCAACTTGAAGCTAGATATACTTTGCTACACTTCAGTAGATTTCCCTGTAGCTGCTGCTGTGTCTGAGCTTGTTATTCCAGGATTAGCTGATCAGCTGAGCATTATGAAGAAGGCTATTGTATCAGAGCTCACAACTCAACAACCCCAGGTACATAATAAGTTAGCCCACGCTTGGCAAGGCAATTAGCTGTCCAGCAGCAGTTATGGAATGCGAACCACAAGAACTTTTCACCGCAAGGGCACCCAGCTCTTCCAAATTTTTTGGTGCATTTCAGGATGTTCTAAAATAGATCATAAATGTAGAATATGTGCACATGATTTTTTTTTTGCACTAATATGATCACATGCACTGTGCAAAAGAAATAAAGCGATATTACAAAATTGCACATATTTTTTCCATGCAGTGCACGTGATTACATTTTTGCACAACTATTTGCTAGTTTACATGTTACAATCTAAGTGCAGTGTACAAAACAAAACATGGCTTCATGTGATTCTAGGAGCATATTTAATTTAGCCGTGCCTGCATGAAGTCACTCTTGTGAGTTTGTGCGGACATTAGGGAATAACCACCTGTGCTTCCTTAGTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAACACGATACCTCCTAGACATGATCTTCCACCTCAAACTATGATGTTAGGTTTCATGCACAACTGTCTAGTAATAGCAGAAGTATGGGAAGACACTTCGTAATTAGCACACTTAAATTTCGAAAGTAGATTCCATATTGGGCACAGTTGCTTGCCTTATCACCAAGCCAAAACTTTGGTATTACAGGATGAGACCTAAATATTGTTGTGCTGCTTTGGATTATCCAGTTAGCATTTTGCAGTGTATGCCTGGAGGACAATATCTAGAACTGTGTTTAGTGTCCTCTTCATATGTTTCTAGACTCTTTGTATCTGACCTACTGTTGTTCTGACCAGTCTTGGCCATTTTTCTATTTCAGGGATGGGGATGTGCTTATCGTTCTCTACAAACTATCATGTCTTGGTACAGATTGCAACAGTATTCATCTATAAATGTTCCATCACACAGGTTTGTATGTACTAATATTTTTCATGCCTACATTTCTTGTTGTTTACCGTCACACTTAATTACCAGGTCATTTACATCTATATTTGTTCGATATAAGTATTAGTAATGTATTCTTGAAAACCGGAACAGAATTGTGGTATTTTTGGTATGCTTTACTTAAAATGCAATTAGTCTGGTGTTGTTGATTAATAACATAAATCTAGCTTGCCATATGTGCTTTCAACTGGAGAGACTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAATGGGTTAGTATGATTTTTTAAAGCAACTTTCCTATAGAAAATTTTTGCAAAAATACACCGTTTAGCAGTTTGGGAAGCGTGCGCACGGAAAACGAGGGAGAAGAGGATGGGAACTAGAAGAGCCGAACGCAGCCTTAACCAAGCAAGATTGTATCTCTACTACTTTAACAGCCAGTAGTGGTGGTGGCAGTGAGTCTGCCTCCACCACTACCAATTGACATGTGGGATCTAGCAATAGTACCATATATGTTGGTATATCAAATTAGAATAAAAGAAAGGAGAGTATAGGATAGTCGTAGAATATGGATAGTTTTGATCCATTCTCTGTGTATATAATATAGGCTTTACAACATATAATTAAGTTGTCTTTCTTAACTTCCGTGGCAATGCACAGACATTTAGCTAGTGCTTGTATGATGCAACCATCAGTGGACAGCAACATTGCTTGAGTCGAGATATTAAATACTAGAATGAATATTCTTGCCTTCCGTGCAATTCCACTTTTTTTCTAAACTGAACCCTGCACTTCCACTTGTTGAGACTAGAATGCATTCATCTCCTCCCTGCTCTTCACGTCAAAGAAACATTTGAAACCCTGACGTGATGTTATTCATGGTTGTCTTCAAATAGTTTTGGGTCAATTATGTGCTGAAATCCTGACCCAAACTAATGCAGGTGGTGGAGTCTTGGCTTACACCCTTTTAGGAGTTGACTACAACGAAGCCAGTGGTGATTGTGCTTTTCTCATCCTTGATCCACACTATACTGGTGCTGATGATCTCAAGAAGATCGTGAATGGTGGATGGTGTGGGTGGAAGAAATCCATCGACAGCAAAGGCCGTAGCTTCTTCCTGAAAGACAAGTTCTACAACCTTCTGCTACCCCAAAGGCCTAATATGGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037248