BGIOSGA037252

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Revision as of 08:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037252| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037252, complete gene.| tag = OS12G02...")
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Gene Name

BGIOSGA037252

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037252, complete gene.

LocusTag

OS12G0289600

Ensembl Transcript ID

BGIOSGA037252-TA

Ensembl Protein ID

BGIOSGA037252-PA

Length

3400

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8969221..8972620

Sequence Coding Region

8969221..8970756,8970994..8971213,8971357..8971545,8971624..8971824,8971914..8972620

Genome Context

<gbrowseImage1> name=IndicaChromosome12:8969221..8972620 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:8969221..8972620 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACATGAGGCGCCATTCGGTAGATGTTCCACTGTCAAGAACATTGGTGCAGCTGAAGAGAGTGAGGTCGCTGCGGGATCCAGCAACAAACTCTTTGAGCAAGTATGCATCTCCTTCTGACAATATGATCTGGGAGACCGCTTCTAGCAATGGGGTTGCAATGGACCTAGGCAGGTCAGCACATCATCAGTTGATCGAAGAAGATGGAGATTTGGAAGCTGAAGCTACATTGGGTTCAGAGCGGAGTTTTCGGGCACCAAATGCAAGAACCGCATCATATCGGAAATCTTCTGTTGTCAAGATCCGAGGCTTAAACCCGCCTAGAAATAAGCAAGCTCATCGTGCACGCCAAGATGGTCATCGCAAGTCAGTGGACTCTAGCCACTCTAACCATAGCTCTATTCGACAATTGGCAAACACTATGGTTAACAATGTAGCTGAGGAGAAGGAAGAAGAGGAGGAAGTGAATTCTTATGAACGTTCAGTTCCCACACCGCTGGCGAAGACTGATGAAGAAGTGAAGATGCCAGGGTTTTCCAAATTCAGGAACAAATCTTCCGCTGCAATGAGCCGTGTCGGTAGCCCTTGTATGTCAGCCAGTGAGGCACGCTCAGTTAGGTCGAGAAGAACAGAGGAAACACAAGTGAGGTCAAATGATGTTGTTGGATCAAATTTCAGTGGGTGTGGGATTAGCTACTGCTGGTCCGGGGCATCAAAATACCGTGAACTTTATTATGACAGTGATGGTCCAGAGCAACCTTTGTTATCGCCTGAAGGGACCGATGCAGCGTTTCAGGAAAATGTACCATACACTGAGACGCCAAGGTGTTTAAGTCAGAAATTTCGCCCTCGGTCCTTCAGTGAGCTGATTGGCCTCAATGTGGTTGCTCAGTCCCTCTTATATTCCTCTTGCAAAGGAAAAGTTGCTCCAATGTACTTGTTCCATGGTCCTCGAGGTACAGGCAAGACATCCACGGCACGAATTTTTGCTGCAGCTCTAAACTGCCTCTCTCTCGAAGAGCAAAGGCCATGTGGATTCTGTAAAGAGTGTGTCATCCTCTTCTCCGGGAGGAGTAGAGATGTTAAAGAACTTGATGCAGCAAAAATGGATCGTTTAGGTCGAGTGAAGGCGCTTCTCAAGAGTGCATCTCTTGTCCCATACTCATCACGCTTCAAGGTCTTCATAGTTGATGAATGCCATCTGTTGCCAGAGGATGCTTGGTCAGCAATACTGAAGAGTCTTGATGAGCCATACCGGCATGCTGTGTACATTATGATTACTTCTGACATAGATAGCCTCCCTCGCACTTCTATCACACACTGCCAGAAATTCCATTTTCCAAAGATAAAGGTGGCAGATATTGTCTACAGGTTGGAGAGAATCTGCATAGAGGAAGGATTAGAATTTGACCATGATGGGTTGTACTTCATTTCTGCAAAGTCTAATGGTTCTCTTAGAGATGCGGAAATAATGCTTGATCAACTCAGTTTGCTCGGGAAAAAGATCACAATTTCTCTTGTCCATGAACTTGTAGGATCAGTGTCTGATGATGAGTTGATTGAATTGCTTGATTTAGCTTTGTCGTCAGACACCACCAACACAGTAAGGCGAGCACGAGAGCTTATGGCATCTGCAATTGATCCTCTGCAGCTGGTCTCTCAATTGGCAAACCTTATTATGGACATTCTCTCAGGAAGATGCCAGTCTGCAGTCACTGAAGTCAGCAAAAGTTTCTTAGGAAGATATGCATTAGCCGAGGTTGGTATAAAGAAACTTAGACATGCACTGAAAATACTTTCGGAAACTGAAAAACAATTGAGGACATCAAGAAATCAGGCTACTTGGGTGACAGTTGCGCTTTTGCAGTTTGGCACCAATGAATCTAACCTTATCGCAGAGTCAAATGACATGCATGCACATTCAGCAATGGGATATACAGATGATTGGGTTTCCAAGGTGAACTCAAGCTCCAATTTCTGCCATGCTTGCAACAGCAACAAGTCCAACTGTTCTGAGAGGCACTGTAGGCGTCTTAAGCTTGAAAACATCTGGAGGAGAGCAATAGGAAAGTGTCAATCAAGGTCAGCCAAAAATTTCCTGAGGAAAGAAGGTTTCCTATCATCAGTCCATGTTACTGAAGAGCTGGCTATTGCGGAAGTTGGATTTAGCCATCCAGATCACATATCAAGAGCAGAAAAAATGCAAAGCCTAATAGAAAGCGCACTGCAGAATGTTCTCGGGTGCAACGTGGAGGTTAAGTTCAAACTTGTTCCACGGCCAGTGAGAAAAGATGCAAGGTCAAAGAGACAGTCATTCAGTCTCCTCAGCTGCTCAGGCCGGAAGCAAGAACTGTCAGATTCAGCTGTGACCGACGAAGATGAAACTGTGAGGCATGGAGCAAGAGAAACACCGTCTAAAGGCTACTCCTCTAGTCAGCAACAATCACCATTCATCATGCAACGCACTGATTCTAAACCAACAGTTCACGGCTGCGAGGATGATGCTCGGAGCACCTTGACATCAAACAGATCCATGACTGATGACATGACAAGGACATGCAGGTCAGAGACTAACTACTCAAAGGGAGTCAGTGAGCAGGGCCGTTTTGATAGCATCCAGGAGCCTGACCTTCAACCAAACTGCTTCTCACGGACATTAAAGCTTCAGAAGAGGTTCTTCTCTTCAGATGCTGCACACACAATCTGTTTGAAGATACAGCCTCACAACAAGATGGATTTCCTACCTAAGAAGGAATTCGACACATATTTCTGCGCATATGAGCCTTATGAGCAGTGTTCAAGATCAAATTCACAAGCTACTTGCAGCTCAAGAGATGATAACTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MADMRRHSVDVPLSRTLVQLKRVRSLRDPATNSLSKYASPSDNMIWETASSNGVAMDLGRSAHHQLIEEDGDLEAEATLGSERSFRAPNARTASYRKSSVVKIRGLNPPRNKQAHRARQDGHRKSVDSSHSNHSSIRQLANTMVNNVAEEKEEEEEVNSYERSVPTPLAKTDEEVKMPGFSKFRNKSSAAMSRVGSPCMSASEARSVRSRRTEETQVRSNDVVGSNFSGCGISYCWSGASKYRELYYDSDGPEQPLLSPEGTDAAFQENVPYTETPRCLSQKFRPRSFSELIGLNVVAQSLLYSSCKGKVAPMYLFHGPRGTGKTSTARIFAAALNCLSLEEQRPCGFCKECVILFSGRSRDVKELDAAKMDRLGRVKALLKSASLVPYSSRFKVFIVDECHLLPEDAWSAILKSLDEPYRHAVYIMITSDIDSLPRTSITHCQKFHFPKIKVADIVYRLERICIEEGLEFDHDGLYFISAKSNGSLRDAEIMLDQLSLLGKKITISLVHELVGSVSDDELIELLDLALSSDTTNTVRRARELMASAIDPLQLVSQLANLIMDILSGRCQSAVTEVSKSFLGRYALAEVGIKKLRHALKILSETEKQLRTSRNQATWVTVALLQFGTNESNLIAESNDMHAHSAMGYTDDWVSKVNSSSNFCHACNSNKSNCSERHCRRLKLENIWRRAIGKCQSRSAKNFLRKEGFLSSVHVTEELAIAEVGFSHPDHISRAEKMQSLIESALQNVLGCNVEVKFKLVPRPVRKDARSKRQSFSLLSCSGRKQELSDSAVTDEDETVRHGARETPSKGYSSSQQQSPFIMQRTDSKPTVHGCEDDARSTLTSNRSMTDDMTRTCRSETNYSKGVSEQGRFDSIQEPDLQPNCFSRTLKLQKRFFSSDAAHTICLKIQPHNKMDFLPKKEFDTYFCAYEPYEQCSRSNSQATCSSRDDNL</aaseq>

Gene Sequence

<dnaseqindica>1..1536#1774..1993#2137..2325#2404..2604#2694..3400#ATGGCGGACATGAGGCGCCATTCGGTAGATGTTCCACTGTCAAGAACATTGGTGCAGCTGAAGAGAGTGAGGTCGCTGCGGGATCCAGCAACAAACTCTTTGAGCAAGTATGCATCTCCTTCTGACAATATGATCTGGGAGACCGCTTCTAGCAATGGGGTTGCAATGGACCTAGGCAGGTCAGCACATCATCAGTTGATCGAAGAAGATGGAGATTTGGAAGCTGAAGCTACATTGGGTTCAGAGCGGAGTTTTCGGGCACCAAATGCAAGAACCGCATCATATCGGAAATCTTCTGTTGTCAAGATCCGAGGCTTAAACCCGCCTAGAAATAAGCAAGCTCATCGTGCACGCCAAGATGGTCATCGCAAGTCAGTGGACTCTAGCCACTCTAACCATAGCTCTATTCGACAATTGGCAAACACTATGGTTAACAATGTAGCTGAGGAGAAGGAAGAAGAGGAGGAAGTGAATTCTTATGAACGTTCAGTTCCCACACCGCTGGCGAAGACTGATGAAGAAGTGAAGATGCCAGGGTTTTCCAAATTCAGGAACAAATCTTCCGCTGCAATGAGCCGTGTCGGTAGCCCTTGTATGTCAGCCAGTGAGGCACGCTCAGTTAGGTCGAGAAGAACAGAGGAAACACAAGTGAGGTCAAATGATGTTGTTGGATCAAATTTCAGTGGGTGTGGGATTAGCTACTGCTGGTCCGGGGCATCAAAATACCGTGAACTTTATTATGACAGTGATGGTCCAGAGCAACCTTTGTTATCGCCTGAAGGGACCGATGCAGCGTTTCAGGAAAATGTACCATACACTGAGACGCCAAGGTGTTTAAGTCAGAAATTTCGCCCTCGGTCCTTCAGTGAGCTGATTGGCCTCAATGTGGTTGCTCAGTCCCTCTTATATTCCTCTTGCAAAGGAAAAGTTGCTCCAATGTACTTGTTCCATGGTCCTCGAGGTACAGGCAAGACATCCACGGCACGAATTTTTGCTGCAGCTCTAAACTGCCTCTCTCTCGAAGAGCAAAGGCCATGTGGATTCTGTAAAGAGTGTGTCATCCTCTTCTCCGGGAGGAGTAGAGATGTTAAAGAACTTGATGCAGCAAAAATGGATCGTTTAGGTCGAGTGAAGGCGCTTCTCAAGAGTGCATCTCTTGTCCCATACTCATCACGCTTCAAGGTCTTCATAGTTGATGAATGCCATCTGTTGCCAGAGGATGCTTGGTCAGCAATACTGAAGAGTCTTGATGAGCCATACCGGCATGCTGTGTACATTATGATTACTTCTGACATAGATAGCCTCCCTCGCACTTCTATCACACACTGCCAGAAATTCCATTTTCCAAAGATAAAGGTGGCAGATATTGTCTACAGGTTGGAGAGAATCTGCATAGAGGAAGGATTAGAATTTGACCATGATGGGTTGTACTTCATTTCTGCAAAGTCTAATGGTTCTCTTAGAGATGCGGAAATAATGCTTGATCAACTCAGTTTGCTCGGGAAAAAGATCACAATTTCTCTTGTCCATGAACTTGTGAGTAGTGTTACCTTTGATTCTCTCTCTCTCTTTCAAACAGTTCCTTTGATTCTCTAAGTATATCATACTGTCAGTATTGTCATTTTCCTTTGATGCTTTACTTATATCATATTGTCAGTATTGTCATTTTCTGTTGATGCTCTAATACATCATATTGTCAGTATTGTCATTTTTCTTGATGCTCTAAGTATATCATATTGCCAGTTGTCATTTTCTTACCATTTTTGTTTGCAGGTAGGATCAGTGTCTGATGATGAGTTGATTGAATTGCTTGATTTAGCTTTGTCGTCAGACACCACCAACACAGTAAGGCGAGCACGAGAGCTTATGGCATCTGCAATTGATCCTCTGCAGCTGGTCTCTCAATTGGCAAACCTTATTATGGACATTCTCTCAGGAAGATGCCAGTCTGCAGTCACTGAAGTCAGCAAAAGTTTCTTAGGAAGATATGCATGTAAGTATCCTTTCCTTGTTAATCTTGTATCAGACCACTACTATTGTTACTTGCTGCAAGTGAATTGTATGAATGATTCGTAAAGTTGCATGTTCCCATTTTTAAGTCTGGTTGTTGAATTGACCTTTTGCTATATCGTGCAGTAGCCGAGGTTGGTATAAAGAAACTTAGACATGCACTGAAAATACTTTCGGAAACTGAAAAACAATTGAGGACATCAAGAAATCAGGCTACTTGGGTGACAGTTGCGCTTTTGCAGTTTGGCACCAATGAATCTAACCTTATCGCAGAGTCAAATGACATGCATGCACATTCAGCAATGGGATATACAGGTAATATAATAAAAGATTTATGAGCAATTCTGTCGGAAATCGTAGAGTGACAACCACCTCCCATATCCAAATGTGCAGATGATTGGGTTTCCAAGGTGAACTCAAGCTCCAATTTCTGCCATGCTTGCAACAGCAACAAGTCCAACTGTTCTGAGAGGCACTGTAGGCGTCTTAAGCTTGAAAACATCTGGAGGAGAGCAATAGGAAAGTGTCAATCAAGGTCAGCCAAAAATTTCCTGAGGAAAGAAGGTTTCCTATCATCAGTCCATGTTACTGAAGGTAATTCACATGTACCATCTTTAATGTTCTTGATTTTAGCCTGCTCATAGGTTTGTGCTGAATATGCCACCATATATGAAAATTCTCAGAGCTGGCTATTGCGGAAGTTGGATTTAGCCATCCAGATCACATATCAAGAGCAGAAAAAATGCAAAGCCTAATAGAAAGCGCACTGCAGAATGTTCTCGGGTGCAACGTGGAGGTTAAGTTCAAACTTGTTCCACGGCCAGTGAGAAAAGATGCAAGGTCAAAGAGACAGTCATTCAGTCTCCTCAGCTGCTCAGGCCGGAAGCAAGAACTGTCAGATTCAGCTGTGACCGACGAAGATGAAACTGTGAGGCATGGAGCAAGAGAAACACCGTCTAAAGGCTACTCCTCTAGTCAGCAACAATCACCATTCATCATGCAACGCACTGATTCTAAACCAACAGTTCACGGCTGCGAGGATGATGCTCGGAGCACCTTGACATCAAACAGATCCATGACTGATGACATGACAAGGACATGCAGGTCAGAGACTAACTACTCAAAGGGAGTCAGTGAGCAGGGCCGTTTTGATAGCATCCAGGAGCCTGACCTTCAACCAAACTGCTTCTCACGGACATTAAAGCTTCAGAAGAGGTTCTTCTCTTCAGATGCTGCACACACAATCTGTTTGAAGATACAGCCTCACAACAAGATGGATTTCCTACCTAAGAAGGAATTCGACACATATTTCTGCGCATATGAGCCTTATGAGCAGTGTTCAAGATCAAATTCACAAGCTACTTGCAGCTCAAGAGATGATAACTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037252