BGIOSGA037299

From RiceWiki
Revision as of 08:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037299| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037299, complete gene.| tag = OsI_381...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037299

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037299, complete gene.

LocusTag

OsI_38122

Ensembl Transcript ID

BGIOSGA037299-TA

Ensembl Protein ID

BGIOSGA037299-PA

Length

2827

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10513344..10516170

Sequence Coding Region

10513344..10513545,10513817..10513875,10513984..10514059,10514148..10514219,10514318..10514405
,10514714..10514957,10515054..10515169,10515260..10515471,10515569..10515600
,10515679..10515781,10515896..10516170

Genome Context

<gbrowseImage1> name=IndicaChromosome12:10513344..10516170 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:10513344..10516170 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATGCCATTGCTACTCCTCATCGCCATCGTCGTCGTCTCCCTCTCCCGTGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCGGGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCAAGTATGGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGTAACTCCTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATATGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCAGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGCGACAAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTCACCCTTGGCTGGTACCTGCACCCGATTATATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATTGGGAAACAGGCGTACTCGAACTGGCTTTATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGACCCCATTATAATCATCGGAGAAAATGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGTGCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGGGCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTCGAGTGGCGGCTCGGGTTCACTTCAAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MKMPLLLLIAIVVVSLSRGNGEQTDLTRETFPAGFVFGTASSAYQVEGNALKYGRGPCIWDTFLMQPGVTPDNSTANVTVDEYHRYMDDVDNMVRVGFDAYRFSISWSRIFPSGLGKINKDGVDYYHRLIDYMLANNIIPYVVLYHYDLPQVLHDQYKGWLHPRIVRDFVRYADFCFKTYGHKVKNWFTINEPRMMANHGYGDGFFPPGRCTSCQPGGNSATEPYIAAHNLLLSHAAAVRTYRDKYQAIQKGKIGILLDFVWYEPLTDKEEDHAAAHRAREFTLGWYLHPIIYGHYPETMQNAVKERLPNFTREQSEMIKGSADYIAINHYTTYYVSHHVNKTSISYLNDWDVKISYERNGVPIGKQAYSNWLYVVPWGIYKAVMHVKEKYKDPIIIIGENGIDQPGNETLPGALYDFFRIQYFDQYLHELKRAIKDGARVTGYFAWSLLDNFEWRLGFTSKFGIVYVDRSTFTRYPKDSTRWFRKMIKSEV</aaseq>

Gene Sequence

<dnaseqindica>1..202#474..532#641..716#805..876#975..1062#1371..1614#1711..1826#1917..2128#2226..2257#2336..2438#2553..2827#ATGAAGATGCCATTGCTACTCCTCATCGCCATCGTCGTCGTCTCCCTCTCCCGTGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCGGGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCAAGTATGGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGAGATCGATGATGCATGTTCAGGCAAAACTAGCAATGTGGTATCTAAATATACAGATCATAAACAGTTTGTCGCATTTTTCAGATAATGGAATTAACAATGTGTTGGGACGATCCACCTAAAAAGAGAATTATGACAACAACAATCTAAAAAGAATTACATAGCCTGATATTGAAATGTTGTTGCATTACGGCGCGTTGCCTTTTGTACGTCTCTAGTGGATGTATGACGACTGGTTGTTGATTTGGCTCTGATTGTTCCTTTGGATAGGTGTAACTCCTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGTCAGTGAAAGTCTCATGTGTCTCAGTGCCTGTTCTAATGGGTTTCTGTTCCTCTGTATGACTCTTGATTTGTGGCTTATGTGGCTCCTCTGATGATCTTCTTTGCAGGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGTAAGTTACCGGCTGAAACATGGTCAGGCACAGTGATGAGATCATGGGATATTCCTTTCATTGATGGTTTTTCTTCTGCGTGTTGTAGGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAGTACGTTGGTCTTGGCATTTCTTCTAGTTCTTGCCCATTTCGGATTTCATGATCTCGAATTAATGGGTTTTTTTTTTTTGGTTTGATTTGCACATCAGACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGTAAGTGTTCGTGATCAAAGCCATCTGTTTGGCTGTAAAACTTAAAATTAAATACCCTTTAAATTGTTTGACAAACTACAGAAGCACCTCTGAAGATTTTGTGCTAAATTATGAAACCCATAGCTCTCTAACTGCGAAATCCTGACAGTGAAAGTTCTGCAGGTGTTTAACCAAAATAGGTTTCACTGTAGCATAACCGACATACACAAATATCAAACCCAGACAATCTGTATCCTCCCTTTCTTACGTTCCTTACTCCCTTTTTCTTGAATTAATGTGTGATTCATGTCTGCGACTTCATTTTGCAGGAGAGATTTTGTGAGATATGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCAGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGCGACAAGTACCAGGCTAGTGAATGATATCCATGCCCCTACTATCCAATTCAACATTTCTTAAAATCCCCAATGTATCAGCTCATGTTCATGATACCTTGCGATTTTCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTCACCCTTGGCTGGTGATACATCTTACACTGTTCATCAATCATTGCTCTTACACGGTGTCCGCACAAAGGTTGAACTGAACTTCCACTTGAAACTTTTGCTAGGTACCTGCACCCGATTATATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATGTATGACACTTTCAAATCACACAGTATTAGACCAGAAATATTTGTACCTTTTCAATTCTTTGCCTTCCTAGCTAACACATTTTGGTCCTCTATTCAGATGAGCGTAACGGTGTGCCAATTGGGAAACAGGTAAGCAACAATTTACAAGAAAGGTTGAAAAGAATGATAGATCATGAACTAAATTCTGGTTTTTAAACATCTATGCAGGCGTACTCGAACTGGCTTTATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGACCCCATTATAATCATCGGAGAAAATGGTAAATAAAGATAATACTGGAGACCCTTTCAATTTTCGGACAGTGAACAGTACAACTATAAAAGTGCTCTGCAGAATGAATCTAGGAGCAAAATCTAACAAGAACCTTTTGCAGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGTGCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGGGCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTCGAGTGGCGGCTCGGGTTCACTTCAAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037299