BGIOSGA037318

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Revision as of 08:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037318| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037318, complete gene.| tag = OS12G04...")
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Gene Name

BGIOSGA037318

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037318, complete gene.

LocusTag

OS12G0430900

Ensembl Transcript ID

BGIOSGA037318-TA

Ensembl Protein ID

BGIOSGA037318-PA

Length

5610

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10947320..10952929

Sequence Coding Region

10947320..10947386,10947721..10948469,10949479..10949622,10949769..10950023,10952058..10952191
,10952567..10952667,10952802..10952929

Genome Context

<gbrowseImage1> name=IndicaChromosome12:10947320..10952929 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:10947320..10952929 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGATGCTTTCATCAAAACATGGTGATGATTTTTTCTCGGTGTCTTTACCTGTAGTCATTGTCGCGATAGTGATGCTGGTATTCACTTTCAGTGACGAGCTACCAGGACGACTTGTGATAATCGTATACGACGTTTCTGCTTTACTGTTGCTGTCATTTGGCAACTTCCAGATTCCAGCAGCTGCTGTGCGTGTCGTCCTCGCATCGTTAGGCCTACATAAAAAGAACGGAGAAAATAGCGAGAAAAACCTCAAGGCATCTCTAATCATATTCTATGGGATGGTACTGGGGCAAGGGATACTTTACATTGTAGCATGCTTGCTGGAGGTATTTTCATTCATCCCTCGGAAATACCTCATCCGCCATGGCGGATTGGGAGGTCAGATGGGAGTGGAATATGTGAATTTGTACTATGCATATGCCTTTGAGAAATGCATGGGAGGGGCTGTGCTTGCTCCAAAGAAGATCAGCCTCATCACATTTGCCATGGATTCCCTCAACTCAGACTCATCCAGGAAGAAGCTCTATGGGGTTCAGATGCTGCATAAATTTCAAAAAAAGGAGCAGTTAAGGACCAAAACAATCACAAAACTCACCAATGACACCAGGACAGTAGTCTCATTGTTCGATATGCTGGACTGGACAAGCAATGGGGATGAAGAAATCAGATTATTCGCTGCAAAGGTCACTGCCGAGCTTGCTGGTAGCCTCCGAGTTGTTCAAATCCCAGGGGCAACGCAGCTTGTAGCCTCACTTCTGGACACTGATCACCAACAGACAACAAGGGATCATTTTCTGTTCATTGATAGCCAAATTCCAGCAGCTGCTGTGCGTGTCGTCCTCGCATTGGTAGGTATTCTACATCTACATCAAAAGGACAAAGCAAATAAAGAAGGTATAGACAAGCCGGATAACGAGAAAAACCTCAAGGCATCTCTAATCATATTCTATGGGATGAAATGCATGGGAGGGGCTGTGCTTGCTCCAAAGAAGATCAGCCTCATCACATTTGCCATGGATTCCCTCAACTCAGACTCATCCAGGAAAAAGCTTTATGGGGTTCAGATGCTGCATAAATTTCTCAAAAAGGAGCAGTTAAGGACCAAAACAATCACAAAACTCACCAATGACACCAAGACAGTAGCCTCATTGTTCGATATGCTGGACTGGACAAGCGATGGGGATGAAGAAATCAGATTATTCGCTGCAAAGGCTATGAGGAGAGCCGCAAATTCATTTACTTTGCTCGCTGATGCAGCTCTTGAGGAGTTACCTAGTACAATGGCAGCTGTAAGACTCTCTGGCATGGAAATTAGTGATCTCACCCTTGAACTTAGTGACTTGAGCCAGGAGATAGCAGATGGTGTGAACAAGTCGGCTAAGGTTGCTCAGGCAGTGGAAACTGGCCTAGGGCAAATGCGTGATCTGGCGATGCAGCAGGCAACATCAATGATTGAAGAGCGAGCAAACTTGCAAACTATCCCAAATTCAGCTAAGAAGTCGAATGGTTCTTCGACCCGACAGCGGCGACAGGAGAAAGGAAAGGACCATTCAACCGGTAGAATGGAACCTTGA</cdnaseq>

Protein Sequence

<aaseq>MLMLSSKHGDDFFSVSLPVVIVAIVMLVFTFSDELPGRLVIIVYDVSALLLLSFGNFQIPAAAVRVVLASLGLHKKNGENSEKNLKASLIIFYGMVLGQGILYIVACLLEVFSFIPRKYLIRHGGLGGQMGVEYVNLYYAYAFEKCMGGAVLAPKKISLITFAMDSLNSDSSRKKLYGVQMLHKFQKKEQLRTKTITKLTNDTRTVVSLFDMLDWTSNGDEEIRLFAAKVTAELAGSLRVVQIPGATQLVASLLDTDHQQTTRDHFLFIDSQIPAAAVRVVLALVGILHLHQKDKANKEGIDKPDNEKNLKASLIIFYGMKCMGGAVLAPKKISLITFAMDSLNSDSSRKKLYGVQMLHKFLKKEQLRTKTITKLTNDTKTVASLFDMLDWTSDGDEEIRLFAAKAMRRAANSFTLLADAALEELPSTMAAVRLSGMEISDLTLELSDLSQEIADGVNKSAKVAQAVETGLGQMRDLAMQQATSMIEERANLQTIPNSAKKSNGSSTRQRRQEKGKDHSTGRMEP</aaseq>

Gene Sequence

<dnaseqindica>1..67#402..1150#2160..2303#2450..2704#4739..4872#5248..5348#5483..5610#ATGCTGATGCTTTCATCAAAACATGGTGATGATTTTTTCTCGGTGTCTTTACCTGTAGTCATTGTCGGTATGGCACAGTTAGTTGCAACTGGCATGATGTTGTCTCCAACAGCTCTGAAACTACTATGCAATCCGCTTCGCCGTGCCATTTCGCTCTGGAGCCCATTATTTGCAATCCTATTGCTGGGTGCGTGTATACGAGTACAACGAGATCATGGTTCCAAAAACACAAAGACCAGCCGGACATTATTGTACTTGTACCTAGTACTATGTTTCTTTGTCCTCTTACCAACAATCAGCAGGCTCCGGTTCCCGTGTATAGTAAAACTAGTTGGCAATGTTCTAGGCAGAAAACTGTTACCTTGGCGTCAAAGTCATTCTAAACATGTGTATGCTTGCAGCGATAGTGATGCTGGTATTCACTTTCAGTGACGAGCTACCAGGACGACTTGTGATAATCGTATACGACGTTTCTGCTTTACTGTTGCTGTCATTTGGCAACTTCCAGATTCCAGCAGCTGCTGTGCGTGTCGTCCTCGCATCGTTAGGCCTACATAAAAAGAACGGAGAAAATAGCGAGAAAAACCTCAAGGCATCTCTAATCATATTCTATGGGATGGTACTGGGGCAAGGGATACTTTACATTGTAGCATGCTTGCTGGAGGTATTTTCATTCATCCCTCGGAAATACCTCATCCGCCATGGCGGATTGGGAGGTCAGATGGGAGTGGAATATGTGAATTTGTACTATGCATATGCCTTTGAGAAATGCATGGGAGGGGCTGTGCTTGCTCCAAAGAAGATCAGCCTCATCACATTTGCCATGGATTCCCTCAACTCAGACTCATCCAGGAAGAAGCTCTATGGGGTTCAGATGCTGCATAAATTTCAAAAAAAGGAGCAGTTAAGGACCAAAACAATCACAAAACTCACCAATGACACCAGGACAGTAGTCTCATTGTTCGATATGCTGGACTGGACAAGCAATGGGGATGAAGAAATCAGATTATTCGCTGCAAAGGTCACTGCCGAGCTTGCTGGTAGCCTCCGAGTTGTTCAAATCCCAGGGGCAACGCAGCTTGTAGCCTCACTTCTGGACACTGATCACCAACAGACAACAAGGGATCATTTTCTGTTCATTGATAGCCAAGTGGGAAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAAATTCAAACTTCGGAATTAATAATGGATCTGTACGCTTCTTTTATCAAAACTATTATAGTTATTATATCTCACTTAGATGGATAGTTTGGTTCATAGTGTTGCTAATGACACGTTTGGTTTGGCACGGATTCTCAAGATGATATATACTACTCCCTCCCTCTCATAATATAAGGGAATAGCTAAAATGGACTTTACACATCTACTATAGTAGAATGCTTCCAGTAGTGACCACCGTGCGTACATCCGTCTTATATTTTTTTATGGATCGCTGTCCCTTTTTAATTAACAATGGCACTGCACATATTTCAGGATGTTTACCCGCGATAACAGGCTGGATTACCAGCTGCTTTTTCGTAGCACAGGGGCTCTTAGACTTCTTGGTTGGAATGGTATGCTGATTGTGATAGTATATTTTTCCGCCATGCTGATGCTTTCGACAAACTATGGTTCTGATGAAAATGGAGATAAATTTTTTACGGTGTCTTTACCTGGAGTCATTGTCGGTATGGCACTGTTGGTTGCAACTGGCAAGATGTTGTCTGGAGCAGCTCTAAAAGTACTTTGCAATCCGCTTCGCCGTGCCATTTCGCTCTGGAGCCCATTATTTGCAATCCTATTGCTGGGTGTGTGTATAGGAGTACAACGAGATCATGGTTCCAAAAACACAAAGACCAGCCGGACATTATTGTGCTTGTACCTAGTACTATTTTCGTTTGTCCTCTTACCAACAATCAGCAGGCTCCGTTTCCCATGTATAGTAAAATTAGTTGGCAATGTTCTATGCAGAAAACTGTTACCTTGGCGTCAAGTCATTCTAAACATGTGTATGCTTGCTGCGATAGTGATGCTGGTATTCATTTTCAGTGAAGAGCTATCTGCTCAACTTCTGATAATCGTATACGAGGTTTCTGCTTTACTGTTGCTGTCATTTGGCAACTTCCAGATTCCAGCAGCTGCTGTGCGTGTCGTCCTCGCATTGGTAGGTATTCTACATCTACATCAAAAGGACAAAGCAAATAAAGAAGGTATAGACAAGCCGGATAACGAGAAAAACCTCAAGGCATCTCTAATCATATTCTATGGGATGGTGCGGGGCAAGGGATAGTTTACATTGTGGCCTGCTTGCTGGAGGTATTTTCATTCATCCCTCGCAAATACCTCATCCGCCATGGCGGATTGGGAGGTCAGATGGGAGTGGAATATGTCAATTTGTACTATGCATATGCCTTTGAGAAATGCATGGGAGGGGCTGTGCTTGCTCCAAAGAAGATCAGCCTCATCACATTTGCCATGGATTCCCTCAACTCAGACTCATCCAGGAAAAAGCTTTATGGGGTTCAGATGCTGCATAAATTTCTCAAAAAGGAGCAGTTAAGGACCAAAACAATCACAAAACTCACCAATGACACCAAGACAGTAGCCTCATTGTTCGATATGCTGGACTGGACAAGCGATGGGGATGAAGAAATCAGATTATTCGCTGCAAAGGTCACTGCCGAGCTTACTGGTAGCCTCCGAGTTGTTCAAATCCCAGGGGCAACGCAGCTTGTAGCCTCACTTCTGGACACTGATCACCAACAGACACAAGGGATCATTTTCTGTTCATTGATAGCCAAGAGGGAAGAGAAGACTCACCAATTCAGCCAGTTGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTTCTAATGCCATGCTGTGTGGGCCCTTTATTTATTCAGAGAATGATTTAATGGAGCTTTGCGCACATCTATTTTGCGTAAAATCTCCACCAAATGGGTCCTTGGGTAGTAGACTCATGGGCATTTGTCAGACAATTGGGTGTTTAGTCATTGCCTCACTGGTATTTGTCGAGATGGACATGACAACTAGCTTAAATGTGGGATTTGCTTAAGAAAACGTAAGGATGAGCCTGGGAACCGCCATTATGCATGCTGAAATATGAGTGCAGTATGGTGCTCGATGTGATCACTGAAGCTATTCAGTAATTCGCCAAACTCGGTAGAATGCCAACAACACCATTGTATCTAACTATTGTAGCTGCTAACAATGTGGCCTTGCACTAGTTATGGAGATCAATGTCATAATATGCATCAATGCATGGCTCTTTTCATTCTCTTAGAGAAATGCCTATGCTTTGTGGGCTTGTGACAGCTGGTAAGCTACACCCAAGATGGATTGATTATGACAGTAGAAAAGAAAATACGAAGAAAAGTTTTATGAAAGTTGAGGGGTCGATTGCTAATGAGTGAAATAAAGGAAGTGGTATCAGAAGGCGAGAAGAAGAAAGGGGAAGTGCAGTGGGAACAACTACAAATTATACAGTTGTTTCTGCCCCAATTATGTTCTCCTGTTATTTGAAATGGAAATTTTGCTACAGGACACTCGTTATGTGTGGTTTTAGCTCAGGGACACCGCAAAAACGTGGCTTTGGGGAAAGACACGCTATAAACGTGGATATTTGCCCATGGACACTATGCCGTCTAACTGAAGCCTGCCGTGCTGACGTGGCGGTCGGGAGCCCTTTTTTTGCCCGGTCGGACCTAAATGCCCACTGCGCTGGGCTGGGACGGCAAGGCGGCCGGCACGGCGTGGCCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTCGCTCCACGCATCGTCGTCGTCGCCCAAGCTTTGTTAGCGCACGCACGACCTTTAGTGAGTCTCTAGGAACCCTGTTGCCGCACATGCATGCACACATTTTGCACAAATCAAGCCGGAGCTCGACATGCACATGCATACCGAGGTTCGCCGCCGCTTGTGCCACCGTCACCATCGATCCCGGCCACCTCAGTCCATGAAACCACCACCATTAGATGCGCAAAAGACTCAGCTACGTTTTCTCTTTTGCTTGCATTGCTAGATCGGCCGCCGTTCACTGCCGGCGCCGGCGAGAATCCACCGCGACCACGTCACCTTCAAAAAAACGGTCACAGGGGCATTTAGGTCCGACCGGGCAAAAAAAGGGCTCCCGACCGCCACGTCAGTACGGTAGGCTTAAGTTAGACGGCGTAGTGTCCATCGGCAAATATCCACATTTATAGCGTGTCTTTCCCCAAAGCCACGTTTTTGCGGTGTCCCTGGGCTAAAACCACATATAACAAGTGGCCTGTAGCAAAATTTCCCTATTTGAAAATACCAAAACTGATATTTCTTATCCATATACAGTATAAATTTATCTGATGGAATTTTCGGCATCATGGGCATTTGTCAGACTATAGGTTGTTTACTCACTCCATTGGTAGTGGTATTTGTCGAGATGAAAAATCACATTAATACAGTTGTTTTTGCCCGGTTATTTTTGACTGTTATTTGAAAATTCCAAAACTGATATATTTCATAGCTATGTAGTATTGAGTTATCTGATGGAATTTTTGGCATCAAATTATTCAACAGGCTATGAGGAGAGCCGCAAATTCATTTACTTTGCTCGCTGATGCAGCTCTTGAGGAGTTACCTAGTACAATGGCAGCTGTAAGACTCTCTGGCATGGAAATTAGTGATCTCACCCTTGAACTTAGTGACTTGAGGTATGAGCATTCACTAAATGGATTAGTTATACAAAAAAGGGAACGGCTAAGCTCCATTGTCAGTTCATCTATTTGCTTTGTAAGAGTAAATGATTTACCCATTAAATATGCTGTCCCAAAAAATTCTAGGTTCCTGCAGATTTTTTATTTGAAACAGTTTGTTTGTCCATTTCATTGGCATGTCACTGTTTAGTCTGCACTGATTATGACATTATTGTATTGCTTGCTTTAATTTCTACGGATAGACATGATTCTATGTACTCCTAGTCCTAGATGGTTGATACTTGATAGTTAGATGCTGTGCATTCCTCATAAGCATCTGAAGAAACTTAATGCGCATCATCATGTAACCAGCGCATGGAATGTTCCTTGCAGCCAGGAGATAGCAGATGGTGTGAACAAGTCGGCTAAGGTTGCTCAGGCAGTGGAAACTGGCCTAGGGCAAATGCGTGATCTGGCGATGCAGCAGGCAACATGTATGTTTCTAAACTGTAACTAACCTGACAAAAAGTTTGGTTCACATCTGAAGCATTTGTAACTAACCTGGCCAAATGTTTTGTTCACATTCGAAGCATTCGTTGATGTTTTGTTCACTTGTTCCTTTGGGCAGCAATGATTGAAGAGCGAGCAAACTTGCAAACTATCCCAAATTCAGCTAAGAAGTCGAATGGTTCTTCGACCCGACAGCGGCGACAGGAGAAAGGAAAGGACCATTCAACCGGTAGAATGGAACCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037318