Os12g0202900

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0202900| Description = Disease resistance protein family protein| Version = NM_001072905.2 GI:297612828 GeneID:4351739| Length = 4782 bp| ...")
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Gene Name

Os12g0202900

Description

Disease resistance protein family protein

Version

NM_001072905.2 GI:297612828 GeneID:4351739

Length

4782 bp

Definition

Oryza sativa Japonica Group Os12g0202900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5375959..5380740

Sequence Coding Region

5376239..5376300,5376831..5380548

Expression

GEO Profiles:Os12g0202900

Genome Context

<gbrowseImage1> name=NC_008405:5375959..5380740 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5375959..5380740 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcactagtgtttgctggaaaggcagtggcaactgcagccatctccttctggatcaacaaggctttcacctacctgaaagagtacaaggttgaaggcatcgaagatattaagaacaggctactgcagtcgatgccgaagatccaggtcgttctcgatattgtcaatcccaggtatgtaaaggaacagagcagtgcactagatgcatggttatggcagctcaggcacgcagttgaggaggctgaggacgtgatcgatgtgctcgagtactacaaactcaaagaaatggcaaaggaccacaaggttagtgtctggggttcctctttctctaaggtgaagcacaaagttattaagtctgttaaacatgtcagtattttggacaagaatttgaaacaatttactcaccggggcactctcaagaggttgagggaagctgtggagggtttagacaaggttgcttcagatattatgagcattctcacagtcacagaacatctcaaagaggttgcttcgtgtagtcagcagcaggagtattcaacgaacgatgatcgtgcgacaggtttgacattaactccacctaaatttgttggacgagaaaaggagaaagaaaagatagttagatggctgacaaaggcatcaactgacgcttctggaaatttgatgagcactaaccatattcctattctgtcgttaattggtcacggtggcatggggaagactacgttggctcaacgtgtttgtgaagaaatggttaggaagaatttcaaggttatatgggtgtgtgtatctgatcgctttgatgtaacatctgtgacaagtaaaatactagaatctgctacgggggcaaaacctaatgctaattgtttggagacactacagcaaagcctaatacacaaactgaagtattctactgattttttgcttgttttagatgatgtgtgggaagataagaaaatagataaatgggaaaagttgtttgctcctctaaggacagggaagagtgggagcaaaattttgttaacaacacggatgcagtcagtagctgttttggccacagaagccatgggaattgaaacagagttcttgtcaatagaaggactagaagaaggtgaaaatcttgagctcttcagtcattctgtattttctggtcagaatccacaagattttccaaatttgaaatcagtcggcaaacaaattgtgaagaaactaggaggatgtcccctggtaacaaaggttgtcggtggccatttgcggagcaatatgagttttcaacactggaacaatttcttgcaagaaggtttgcaacattttaaaggaagtgaagatgatattatggaagtcctcagactaagctactactgtctaccaaccgaccttcagatttgctttcgatactgtagtatattcccgcaagattatgcatttaaaatgaaagacctagtgctgatgtggataggttcaggactgatctcagaagctggaaataaaccaccaaaaaggcttgaggacattggagaacagatcttggctcaattagctgggaaatcattctttgaaaccaatatcaaagtagatccgtatagtcaaaggaaagaaaattattacataatgcatgacttaatgcatgaattggcaaggtatgtatcttctggggaatgtgcaagaataatcagtcctggcatgttggaaaatgagaaggatacagttcgacacctatgtatttcaggaattgaccatttatctactgaggaggttaagaagatcttacattttaagaatgtgcgcactgttatcattgaaggctcaggtttgattgacagcaatttatttcatgcagttgaaaatgttatggaacaatcaaaatcgctgcgtctactgcaatcaaatttggagaatacatttcatcttccaaaaattgctcatctaaagcacctctgttatattgatctacctaggatatctcctgataccatatgtggacttgtgaaactttatcacttattgctagttaaatgtttcaatggttctcgcgaagagccaaaacaagtgaggtatttgggaaacattgatcatctgcgatatgtgaattacggcaaaattggtgagttcccaattggaaggctcacttcacttcaggagctgcacaactacaggatccaaggtggcaaaggtaacaaaataagcgcaatcagcaacttgagtactcttcgtgaactagaggtgcttggtcttgagaatgttgagagccatgaagaagctgacaatgtcgagctaaatgataagaaatatatcaccttgttatctttggcatggtcagcacgtgcggctgtggaaaacagaaaagatgagttgcttcttaatcaccttgagccatatgctaatattgaaacactgagaatttcaggttatggtggtgtaaggtctcctatttggattgaaaatctctgcatcaagaacttagtgtcactcgagttggcaagatgtctatattgggaaaaacttccttcacttggagagttagtatctcttaaacatctttggttggagtgccttcctagtttgcaacagattggtcaatcatctgaggcctcaagtagtaattgtgttgatttatcccttcctccaaatcttgacactatgatagtaagacgctgcaaagagctgagggcattgcctatcctgcctactaccttggttcattttgaaacaagtaatgttggtttgaccaaacttcctaggataggaaaggaatgcaacgagaacctcgagaccaagtcatccaggctgctggtcgtagttgtcgaagaatgtaaatgtctgaactcacttgaagagagccttctagtgcagggagactacatcaaaagcatccatgtcctacgcatctcagattgtgaagatctggaggctgctccattggtatttgaacagatgaatgaacttagagagcttgatatcagaaactgtccaaagctgaggacatcgagaggtgttggagatacattcctgccattagcacttcaaaaactgaatgtcaattactgtggtgaacttgaacttccactgattggagcactacaaggactcacgcatctttctgagctggtgttggagaagtgcaaatacctagaatcactcccctcacatgatgtgttcaagagcctcaagtctctgaagtctctcgagataataggatgcgagaatctgtcatccttaggtggtcttggttcgcttcaataccttcttgagctgaaaatcagtgcttgtagtaagctcatggcgatcgggtcatcccaaactcccgacgcatcgtctactagcaccctgcagatagactatattgaaattgatctgccagacatactgcatcttgagccactcaagggtctctgtcacaccaaggggttggtgatcagaggtggaacgcagctggagagcttacctgaggaatggcttcttcagaatcgtggaaagctccaatccctgaagatttacagtgccagttctttggaatctctgcccctccatatgcgagacctatgctctctcaacttattgctgttatctggtgctaggaagcttcagtcgcttcctgatttcccatcctctctgcagaagctcgatatcacttgctgctgcaaagaactggaggagaaggttggagtatatgaaagccctgaatggaataatatctcccatattgccagggtgcacataggagattcatacttcatggacggcaaaaaatgcagtgaagagactttggacagacagcagtga</cdnaseq>

Protein Sequence

<aaseq>MALVFAGKAVATAAISFWINKAFTYLKEYKVEGIEDIKNRLLQS MPKIQVVLDIVNPRYVKEQSSALDAWLWQLRHAVEEAEDVIDVLEYYKLKEMAKDHKV SVWGSSFSKVKHKVIKSVKHVSILDKNLKQFTHRGTLKRLREAVEGLDKVASDIMSIL TVTEHLKEVASCSQQQEYSTNDDRATGLTLTPPKFVGREKEKEKIVRWLTKASTDASG NLMSTNHIPILSLIGHGGMGKTTLAQRVCEEMVRKNFKVIWVCVSDRFDVTSVTSKIL ESATGAKPNANCLETLQQSLIHKLKYSTDFLLVLDDVWEDKKIDKWEKLFAPLRTGKS GSKILLTTRMQSVAVLATEAMGIETEFLSIEGLEEGENLELFSHSVFSGQNPQDFPNL KSVGKQIVKKLGGCPLVTKVVGGHLRSNMSFQHWNNFLQEGLQHFKGSEDDIMEVLRL SYYCLPTDLQICFRYCSIFPQDYAFKMKDLVLMWIGSGLISEAGNKPPKRLEDIGEQI LAQLAGKSFFETNIKVDPYSQRKENYYIMHDLMHELARYVSSGECARIISPGMLENEK DTVRHLCISGIDHLSTEEVKKILHFKNVRTVIIEGSGLIDSNLFHAVENVMEQSKSLR LLQSNLENTFHLPKIAHLKHLCYIDLPRISPDTICGLVKLYHLLLVKCFNGSREEPKQ VRYLGNIDHLRYVNYGKIGEFPIGRLTSLQELHNYRIQGGKGNKISAISNLSTLRELE VLGLENVESHEEADNVELNDKKYITLLSLAWSARAAVENRKDELLLNHLEPYANIETL RISGYGGVRSPIWIENLCIKNLVSLELARCLYWEKLPSLGELVSLKHLWLECLPSLQQ IGQSSEASSSNCVDLSLPPNLDTMIVRRCKELRALPILPTTLVHFETSNVGLTKLPRI GKECNENLETKSSRLLVVVVEECKCLNSLEESLLVQGDYIKSIHVLRISDCEDLEAAP LVFEQMNELRELDIRNCPKLRTSRGVGDTFLPLALQKLNVNYCGELELPLIGALQGLT HLSELVLEKCKYLESLPSHDVFKSLKSLKSLEIIGCENLSSLGGLGSLQYLLELKISA CSKLMAIGSSQTPDASSTSTLQIDYIEIDLPDILHLEPLKGLCHTKGLVIRGGTQLES LPEEWLLQNRGKLQSLKIYSASSLESLPLHMRDLCSLNLLLLSGARKLQSLPDFPSSL QKLDITCCCKELEEKVGVYESPEWNNISHIARVHIGDSYFMDGKKCSEETLDRQQ</aaseq>

Gene Sequence

<dnaseqindica>4441..4502#193..3910#atatgagcctgtgatatagttacattgacatgtgcatggagaggatttttttcctttgtgtgcttctacagtagccatcttcatcttgaatctctctttgtgttgcttcttctcttgcaaatttttacgtgcatctccatatgctgtaatatactaatctctccatagagatctttctctatagcttctgttatggcactagtgtttgctggaaaggcagtggcaactgcagccatctccttctggatcaacaaggctttcacctacctgaaagagtacaaggttgaaggcatcgaagatattaagaacaggctactgcagtcgatgccgaagatccaggtcgttctcgatattgtcaatcccaggtatgtaaaggaacagagcagtgcactagatgcatggttatggcagctcaggcacgcagttgaggaggctgaggacgtgatcgatgtgctcgagtactacaaactcaaagaaatggcaaaggaccacaaggttagtgtctggggttcctctttctctaaggtgaagcacaaagttattaagtctgttaaacatgtcagtattttggacaagaatttgaaacaatttactcaccggggcactctcaagaggttgagggaagctgtggagggtttagacaaggttgcttcagatattatgagcattctcacagtcacagaacatctcaaagaggttgcttcgtgtagtcagcagcaggagtattcaacgaacgatgatcgtgcgacaggtttgacattaactccacctaaatttgttggacgagaaaaggagaaagaaaagatagttagatggctgacaaaggcatcaactgacgcttctggaaatttgatgagcactaaccatattcctattctgtcgttaattggtcacggtggcatggggaagactacgttggctcaacgtgtttgtgaagaaatggttaggaagaatttcaaggttatatgggtgtgtgtatctgatcgctttgatgtaacatctgtgacaagtaaaatactagaatctgctacgggggcaaaacctaatgctaattgtttggagacactacagcaaagcctaatacacaaactgaagtattctactgattttttgcttgttttagatgatgtgtgggaagataagaaaatagataaatgggaaaagttgtttgctcctctaaggacagggaagagtgggagcaaaattttgttaacaacacggatgcagtcagtagctgttttggccacagaagccatgggaattgaaacagagttcttgtcaatagaaggactagaagaaggtgaaaatcttgagctcttcagtcattctgtattttctggtcagaatccacaagattttccaaatttgaaatcagtcggcaaacaaattgtgaagaaactaggaggatgtcccctggtaacaaaggttgtcggtggccatttgcggagcaatatgagttttcaacactggaacaatttcttgcaagaaggtttgcaacattttaaaggaagtgaagatgatattatggaagtcctcagactaagctactactgtctaccaaccgaccttcagatttgctttcgatactgtagtatattcccgcaagattatgcatttaaaatgaaagacctagtgctgatgtggataggttcaggactgatctcagaagctggaaataaaccaccaaaaaggcttgaggacattggagaacagatcttggctcaattagctgggaaatcattctttgaaaccaatatcaaagtagatccgtatagtcaaaggaaagaaaattattacataatgcatgacttaatgcatgaattggcaaggtatgtatcttctggggaatgtgcaagaataatcagtcctggcatgttggaaaatgagaaggatacagttcgacacctatgtatttcaggaattgaccatttatctactgaggaggttaagaagatcttacattttaagaatgtgcgcactgttatcattgaaggctcaggtttgattgacagcaatttatttcatgcagttgaaaatgttatggaacaatcaaaatcgctgcgtctactgcaatcaaatttggagaatacatttcatcttccaaaaattgctcatctaaagcacctctgttatattgatctacctaggatatctcctgataccatatgtggacttgtgaaactttatcacttattgctagttaaatgtttcaatggttctcgcgaagagccaaaacaagtgaggtatttgggaaacattgatcatctgcgatatgtgaattacggcaaaattggtgagttcccaattggaaggctcacttcacttcaggagctgcacaactacaggatccaaggtggcaaaggtaacaaaataagcgcaatcagcaacttgagtactcttcgtgaactagaggtgcttggtcttgagaatgttgagagccatgaagaagctgacaatgtcgagctaaatgataagaaatatatcaccttgttatctttggcatggtcagcacgtgcggctgtggaaaacagaaaagatgagttgcttcttaatcaccttgagccatatgctaatattgaaacactgagaatttcaggttatggtggtgtaaggtctcctatttggattgaaaatctctgcatcaagaacttagtgtcactcgagttggcaagatgtctatattgggaaaaacttccttcacttggagagttagtatctcttaaacatctttggttggagtgccttcctagtttgcaacagattggtcaatcatctgaggcctcaagtagtaattgtgttgatttatcccttcctccaaatcttgacactatgatagtaagacgctgcaaagagctgagggcattgcctatcctgcctactaccttggttcattttgaaacaagtaatgttggtttgaccaaacttcctaggataggaaaggaatgcaacgagaacctcgagaccaagtcatccaggctgctggtcgtagttgtcgaagaatgtaaatgtctgaactcacttgaagagagccttctagtgcagggagactacatcaaaagcatccatgtcctacgcatctcagattgtgaagatctggaggctgctccattggtatttgaacagatgaatgaacttagagagcttgatatcagaaactgtccaaagctgaggacatcgagaggtgttggagatacattcctgccattagcacttcaaaaactgaatgtcaattactgtggtgaacttgaacttccactgattggagcactacaaggactcacgcatctttctgagctggtgttggagaagtgcaaatacctagaatcactcccctcacatgatgtgttcaagagcctcaagtctctgaagtctctcgagataataggatgcgagaatctgtcatccttaggtggtcttggttcgcttcaataccttcttgagctgaaaatcagtgcttgtagtaagctcatggcgatcgggtcatcccaaactcccgacgcatcgtctactagcaccctgcagatagactatattgaaattgatctgccagacatactgcatcttgagccactcaagggtctctgtcacaccaaggggttggtgatcagaggtggaacgcagctggagagcttacctgaggaatggcttcttcagaatcgtggaaagctccaatccctgaagatttacagtgccagttctttggaatctctgcccctccatatgcgagacctatgctctctcaacttattgctgttatctggtgctaggaagcttcagtcgcttcctgatttcccatcctctctgcagaagctcgatatcacttgctgctgcaaagaactggaggagaaggttggagtatatgaaagccctgaatggaataatatctcccatattgccagggtgcacataggtactgccttctctgacctccttgttcttattttgtcatgtaaggtgtatctccgattagctcaaacaatttatgtgcaaggaaaatgtctcaacatgccaaaattgttttgaatttttcaaccaagagtcttcctgaaatgcctttattttaatatgttcttccgattagtaaattccctgtttttttaatttcattttcagttgttttgtgacgcaactttccctagtttgatttgtatttgagacaaattggaagtttgtttgcaaacgcaatatatcccaattctctcgtgtcacttgaagaatgggcacagcttgtctagaaggtagcatttcgaaagttcacatatcaccattcacatgtatgctacggtactctactgtgcaaaagtttctttaacagactccataagctattaaactttagatttggtcctatgttacaaatatttcttgttttttcagttcattcttgacaaatttgtttatagtgatactcttgatgactaattataatcacctatttaggagattcatacttcatggacggcaaaaaatgcagtgaagagactttggacagacagcagtgatgaaatactggttcaagcataagcatttgctttctactgaaatctaggcaaactctgtttctgttaccatgatctttgctagaagcttgttatttgctaccgttaatagccttattactcttttcattttaagctacggaatctctaaaaaaacgttcgacagtttttatcttccaaaactttcgaatttatagtctgttaatttgttctctctcttagctactacagtgagagtgtaatggctaattgtatagcatcgtcaatgtggattcagacctag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0202900, RefSeq:Os12g0202900